RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 RIF1Q5UIP0 2472 aaKnown RBP6.18□□□□□ -1.42
CTNND1-220ENST00000529526 H0YGX0 51 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 MIR7-3HGQ8N6C7 128 aa6.18□□□□□ -1.42
CTNND1-220ENST00000529526 SPAG11BQ08648 103 aa6.17□□□□□ -1.42
CTNND1-220ENST00000529526 Q6ZUT4 128 aa6.17□□□□□ -1.42
CTNND1-220ENST00000529526 TAX1BP3O14907 124 aa6.17□□□□□ -1.42
CTNND1-220ENST00000529526 BRWD1-AS2P59051 145 aa6.17□□□□□ -1.42
CTNND1-220ENST00000529526 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
CTNND1-220ENST00000529526 A0A0B4J2C4 111 aa6.17□□□□□ -1.42
CTNND1-220ENST00000529526 ODF3BA8MYP8 253 aa6.17□□□□□ -1.42
CTNND1-220ENST00000529526 SPANXDQ9BXN6 97 aa6.17□□□□□ -1.42
CTNND1-220ENST00000529526 ACYP1P07311 99 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 TMEM131Q92545 1883 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 TRBV6-1A0A0K0K1D8 114 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 C20orf173Q96LM9 149 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 IGHV1-58A0A0C4DH39 117 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 HIGD2BQ4VC39 106 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 SMAD5-AS1Q9Y6J3 95 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 TMEM89A2RUT3 159 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 P0C879 139 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 IGF1P05019 195 aa6.16□□□□□ -1.42
CTNND1-220ENST00000529526 LMO4P61968 165 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 NREPQ16612 68 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 GDF5OSQ5U4N7 250 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 HIGD1BQ9P298 99 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 TNRC6AQ8NDV7 1962 aaKnown RBP6.15□□□□□ -1.42
CTNND1-220ENST00000529526 PCNX1Q96RV3 2341 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 IGLV2-8P01709 118 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 Q6ZTI0 123 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 C20orf203Q8NBC4 194 aa6.15□□□□□ -1.42
CTNND1-220ENST00000529526 FBXL19-AS1Q494R0 122 aa6.15□□□□□ -1.43
CTNND1-220ENST00000529526 FAM236AA0A1B0GUQ0 79 aa6.15□□□□□ -1.43
CTNND1-220ENST00000529526 FAM236BA0A1B0GV22 79 aa6.15□□□□□ -1.43
CTNND1-220ENST00000529526 A0A1B0GX51 115 aa6.15□□□□□ -1.43
CTNND1-220ENST00000529526 ABCA1O95477 2261 aa6.15□□□□□ -1.43
CTNND1-220ENST00000529526 ARHGAP21Q5T5U3 1957 aa6.15□□□□□ -1.43
CTNND1-220ENST00000529526 CRIP3Q6Q6R5 217 aa6.15□□□□□ -1.43
CTNND1-220ENST00000529526 TEN1Q86WV5 123 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 TRAV26-1A0A087WT03 109 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 PTH2Q96A98 100 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 PRORYQ9H606 182 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 TNFRSF13BO14836 293 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-220ENST00000529526 IGHV4-31P0DP07 118 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 PSMB8P28062 276 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
CTNND1-220ENST00000529526 ZNF295-AS1Q8N0V1 137 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 RNASE8Q8TDE3 154 aaKnown RBP6.14□□□□□ -1.43
CTNND1-220ENST00000529526 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
CTNND1-220ENST00000529526 LTBP2Q14767 1821 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 LINC00269Q8N2A0 174 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 FOXI1Q12951 378 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 A0A1B0GXF2 115 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 CXCL5P42830 114 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 C10orf99Q6UWK7 81 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 Q6YL49 198 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 NUP210LQ5VU65 1888 aa6.13□□□□□ -1.43
CTNND1-220ENST00000529526 NBASA2RRP1 2371 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 NDUFB1O75438 58 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 NDUFA11Q86Y39 141 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 LINC00467Q9BRT7 94 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 TM2D2Q9BX73 214 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 IGKV2D-26A0A0A0MRZ7 120 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 J3KT08 172 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 ZFAND2AQ8N6M9 145 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 SPATA25Q9BR10 227 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 TCL1BO95988 128 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 C11orf45Q8TAV5 145 aa6.12□□□□□ -1.43
CTNND1-220ENST00000529526 CHD3Q12873 2000 aaKnown RBP6.12□□□□□ -1.43
CTNND1-220ENST00000529526 MIAQ16674 131 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 LINC00574Q9H8X3 128 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 NACAE9PAV3 2078 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 EIF4EBP1Q13541 118 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-220ENST00000529526 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
CTNND1-220ENST00000529526 A0A0J9YXY3 114 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 REG3AQ06141 175 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 FAM222AQ5U5X8 452 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 SPATA12Q7Z6I5 190 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 SPANXCQ9NY87 97 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 INAFM1C9JVW0 142 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 IGLC6P0CF74 106 aa6.11□□□□□ -1.43
CTNND1-220ENST00000529526 COX7BP24311 80 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 PROK1P58294 105 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 LINC00482Q8N8I6 264 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 CRYGBP07316 175 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 INSL3P51460 131 aa6.1□□□□□ -1.43
CTNND1-220ENST00000529526 SPTAN1Q13813 2472 aaKnown RBP6.1□□□□□ -1.43
CTNND1-220ENST00000529526 DEFB114Q30KQ6 69 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms