RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 PCF11O94913 1555 aaKnown RBP-3.33□□□□□ -2.94
RNU4-71P-201ENST00000516258 ABCA13Q86UQ4 5058 aa-3.33□□□□□ -2.94
RNU4-71P-201ENST00000516258 CST2P09228 141 aa-3.33□□□□□ -2.94
RNU4-71P-201ENST00000516258 CRYGSP22914 178 aa-3.33□□□□□ -2.94
RNU4-71P-201ENST00000516258 AKR1C8PQ5T2L2 129 aa-3.33□□□□□ -2.94
RNU4-71P-201ENST00000516258 LINC00305Q7Z4B0 112 aa-3.33□□□□□ -2.94
RNU4-71P-201ENST00000516258 LYRM2Q9NU23 88 aaPredicted RBP-3.33□□□□□ -2.94
RNU4-71P-201ENST00000516258 TECPR2O15040 1411 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 CASKIN1Q8WXD9 1431 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 REV3LO60673 3130 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 IBTKQ9P2D0 1353 aaPredicted RBP-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 TRAV13-1A0A0B4J241 112 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 TRAV12-3A0A0B4J271 114 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 TRDV1A0A1B0GX56 115 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 PPP5D1E7EU14 171 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 HBDP02042 147 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 SPCS2Q15005 226 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 CROCCP2Q86T23 111 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 ARMC1Q9NVT9 282 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 TAS2R8Q9NYW2 309 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 KDM5AP29375 1690 aaKnown RBP-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 DNAH1Q9P2D7 4330 aa-3.34□□□□□ -2.94
RNU4-71P-201ENST00000516258 H3BMG7 143 aa-3.35□□□□□ -2.95
RNU4-71P-201ENST00000516258 BASP1P80723 227 aaKnown RBP-3.35□□□□□ -2.95
RNU4-71P-201ENST00000516258 CMYA5Q8N3K9 4069 aa-3.35□□□□□ -2.95
RNU4-71P-201ENST00000516258 FER1L6Q2WGJ9 1857 aa-3.35□□□□□ -2.95
RNU4-71P-201ENST00000516258 CCDC171Q6TFL3 1326 aa-3.36□□□□□ -2.95
RNU4-71P-201ENST00000516258 TRAV2A0A0B4J234 112 aa-3.36□□□□□ -2.95
RNU4-71P-201ENST00000516258 DEFB123Q8N688 67 aa-3.36□□□□□ -2.95
RNU4-71P-201ENST00000516258 PRAP1Q96NZ9 151 aa-3.36□□□□□ -2.95
RNU4-71P-201ENST00000516258 SS18L2Q9UHA2 77 aa-3.36□□□□□ -2.95
RNU4-71P-201ENST00000516258 ERG28Q9UKR5 140 aa-3.36□□□□□ -2.95
RNU4-71P-201ENST00000516258 MYH3P11055 1940 aa-3.36□□□□□ -2.95
RNU4-71P-201ENST00000516258 NBEAQ8NFP9 2946 aa-3.37□□□□□ -2.95
RNU4-71P-201ENST00000516258 CLPSL1A2RUU4 121 aa-3.37□□□□□ -2.95
RNU4-71P-201ENST00000516258 SMIM23A6NLE4 172 aa-3.37□□□□□ -2.95
RNU4-71P-201ENST00000516258 PCBD1P61457 104 aa-3.37□□□□□ -2.95
RNU4-71P-201ENST00000516258 BAGE3Q86Y29 109 aa-3.37□□□□□ -2.95
RNU4-71P-201ENST00000516258 TPM3P06753 285 aa-3.38□□□□□ -2.95
RNU4-71P-201ENST00000516258 TRANK1O15050 2925 aa-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 PNMA8CA0A1B0GUJ8 204 aa-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 PGRMC1O00264 195 aaKnown RBP-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 SRP9P49458 86 aaKnown RBP-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 LSM3P62310 102 aaKnown RBP-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 MRPS15P82914 257 aaKnown RBP-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 PLGLB1Q02325 96 aa-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 AGPAT4-IT1Q9H0P7 198 aa-3.39□□□□□ -2.95
RNU4-71P-201ENST00000516258 RELNP78509 3460 aa-3.4□□□□□ -2.95
RNU4-71P-201ENST00000516258 S100A6P06703 90 aa-3.4□□□□□ -2.95
RNU4-71P-201ENST00000516258 TMED2Q15363 201 aa-3.4□□□□□ -2.95
RNU4-71P-201ENST00000516258 STX19Q8N4C7 294 aa-3.4□□□□□ -2.95
RNU4-71P-201ENST00000516258 DYNLRB2Q8TF09 96 aa-3.4□□□□□ -2.95
RNU4-71P-201ENST00000516258 FAM92AA1XBS5 289 aa-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 M0QZK8 103 aa-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 S100A11P31949 105 aa-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 CCL7P80098 99 aa-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 SPA17Q15506 151 aa-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 HSD17B12Q53GQ0 312 aa-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 CNPY4Q8N129 248 aa-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 MUC22E2RYF6 1773 aaPredicted RBP-3.41□□□□□ -2.96
RNU4-71P-201ENST00000516258 CCDC168Q8NDH2 2452 aa-3.42□□□□□ -2.96
RNU4-71P-201ENST00000516258 UTP20O75691 2785 aaKnown RBP-3.42□□□□□ -2.96
RNU4-71P-201ENST00000516258 TMEM91Q6ZNR0 172 aa-3.42□□□□□ -2.96
RNU4-71P-201ENST00000516258 CBLN4Q9NTU7 201 aa-3.42□□□□□ -2.96
RNU4-71P-201ENST00000516258 METTL1Q9UBP6 276 aaKnown RBP-3.42□□□□□ -2.96
RNU4-71P-201ENST00000516258 LRRK2Q5S007 2527 aa-3.42□□□□□ -2.96
RNU4-71P-201ENST00000516258 SACSQ9NZJ4 4579 aa-3.43□□□□□ -2.96
RNU4-71P-201ENST00000516258 NSD3Q9BZ95 1437 aa-3.43□□□□□ -2.96
RNU4-71P-201ENST00000516258 TRBV7-6A0A0J9YX20 115 aa-3.43□□□□□ -2.96
RNU4-71P-201ENST00000516258 SLC25A5P05141 298 aaKnown RBP-3.43□□□□□ -2.96
RNU4-71P-201ENST00000516258 CEBPGP53567 150 aa-3.43□□□□□ -2.96
RNU4-71P-201ENST00000516258 TPM4P67936 248 aa-3.43□□□□□ -2.96
RNU4-71P-201ENST00000516258 ATG12O94817 140 aa-3.44□□□□□ -2.96
RNU4-71P-201ENST00000516258 UQCRQO14949 82 aa-3.45□□□□□ -2.96
RNU4-71P-201ENST00000516258 UFC1Q9Y3C8 167 aa-3.45□□□□□ -2.96
RNU4-71P-201ENST00000516258 H0YJX3 145 aa-3.46□□□□□ -2.96
RNU4-71P-201ENST00000516258 SMIM6P0DI80 62 aa-3.46□□□□□ -2.96
RNU4-71P-201ENST00000516258 DEFA5Q01523 94 aa-3.46□□□□□ -2.96
RNU4-71P-201ENST00000516258 SNX29P2Q8IUI4 249 aa-3.46□□□□□ -2.96
RNU4-71P-201ENST00000516258 ADGRB1O14514 1584 aa-3.46□□□□□ -2.96
RNU4-71P-201ENST00000516258 ZNF236Q9UL36 1845 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 GAPVD1Q14C86 1478 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 COL12A1Q99715 3063 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 LRRC37A2A6NM11 1700 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 CCDC179H3BU77 68 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 UBE2D1P51668 147 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 C9orf116Q5BN46 136 aaPredicted RBP-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 GINS3Q9BRX5 216 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 SLC35B3Q9H1N7 401 aa-3.47□□□□□ -2.96
RNU4-71P-201ENST00000516258 GCN1Q92616 2671 aaKnown RBP-3.48□□□□□ -2.97
RNU4-71P-201ENST00000516258 M0QX08 132 aa-3.48□□□□□ -2.97
RNU4-71P-201ENST00000516258 HRCT1Q6UXD1 115 aa-3.48□□□□□ -2.97
RNU4-71P-201ENST00000516258 PHB2Q99623 299 aa-3.48□□□□□ -2.97
RNU4-71P-201ENST00000516258 CAMSAP1Q5T5Y3 1602 aa-3.48□□□□□ -2.97
RNU4-71P-201ENST00000516258 PITX3O75364 302 aa-3.49□□□□□ -2.97
RNU4-71P-201ENST00000516258 NOP16Q9Y3C1 178 aaKnown RBP-3.49□□□□□ -2.97
RNU4-71P-201ENST00000516258 NCR2O95944 276 aa-3.5□□□□□ -2.97
RNU4-71P-201ENST00000516258 TCRAP04437 139 aa-3.5□□□□□ -2.97
RNU4-71P-201ENST00000516258 RPL22P35268 128 aaKnown RBP-3.5□□□□□ -2.97
RNU4-71P-201ENST00000516258 COTL1Q14019 142 aa-3.5□□□□□ -2.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms