RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 COL24A1Q17RW2 1714 aa3.35□□□□□ -1.87
AC012055.1-201ENST00000511346 SHANK3Q9BYB0 1731 aa3.35□□□□□ -1.87
AC012055.1-201ENST00000511346 STRCQ7RTU9 1775 aa3.35□□□□□ -1.87
AC012055.1-201ENST00000511346 SHANK2Q9UPX8 1470 aa3.35□□□□□ -1.87
AC012055.1-201ENST00000511346 LMTK2Q8IWU2 1503 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 PCNX2A6NKB5 2137 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 RGPD3A6NKT7 1758 aaPredicted RBP3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 TRAV22A0A0B4J277 110 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 EDDM3BP56851 147 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 NDPQ00604 133 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 LINC00167Q96N53 147 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 PLXNA2O75051 1894 aa3.34□□□□□ -1.87
AC012055.1-201ENST00000511346 IQSEC2Q5JU85 1478 aa3.34□□□□□ -1.88
AC012055.1-201ENST00000511346 FREM3P0C091 2139 aa3.34□□□□□ -1.88
AC012055.1-201ENST00000511346 LTN1O94822 1766 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 PTPRFP10586 1907 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 TFF1P04155 84 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 EFNA4P52798 201 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 ELOBQ15370 118 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 DYNLRB1Q9NP97 96 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 EFCAB5A4FU69 1503 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 CUX1P39880 1505 aa3.33□□□□□ -1.88
AC012055.1-201ENST00000511346 TRBV25-1A0A075B6N4 114 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 TEX49A0A1B0GTD5 131 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 SDHAF1A6NFY7 115 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 TMEM14DPA8MWL7 114 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 UBE2D1P51668 147 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 ZNF56Q15929 161 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 SPINK14Q6IE38 97 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 MRPL36Q9P0J6 103 aaKnown RBP3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 ORMDL1Q9P0S3 153 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 SCN11AQ9UI33 1791 aa3.32□□□□□ -1.88
AC012055.1-201ENST00000511346 COL27A1Q8IZC6 1860 aaPredicted RBP3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 CPAMD8Q8IZJ3 1885 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 LAMB1P07942 1786 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 LRRC9Q6ZRR7 1453 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 IGKV3-15P01624 115 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 Q5VV11 94 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 FAM223AQ8IWN6 122 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 TVP23CQ96ET8 276 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 BPESC1Q9GZL8 116 aa3.31□□□□□ -1.88
AC012055.1-201ENST00000511346 SCN4AP35499 1836 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 A0A0J9YY99 117 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 LOC285095A0A1B0GVY8 99 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 CTSGP08311 255 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 PYDC2Q56P42 97 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 TUBGCP6Q96RT7 1819 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 CUL9Q8IWT3 2517 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 CDC42BPBQ9Y5S2 1711 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 CLTCQ00610 1675 aaKnown RBP3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 COL16A1Q07092 1604 aaPredicted RBP3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 SHROOM2Q13796 1616 aa3.3□□□□□ -1.88
AC012055.1-201ENST00000511346 EML5Q05BV3 1969 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 KIAA1549LQ6ZVL6 1849 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 NUPR2A6NF83 97 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 HMGN2P05204 90 aaKnown RBP3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 HRES1P13985 223 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 ELOF1P60002 83 aaKnown RBP3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 PSMG4Q5JS54 123 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 XAF1Q6GPH4 301 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 CCL26Q9Y258 94 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 PPRC1Q5VV67 1664 aaKnown RBP3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 IQGAP3Q86VI3 1631 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 MYO18AQ92614 2054 aaKnown RBP3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 PTPRDP23468 1912 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 TCHHQ07283 1943 aa3.29□□□□□ -1.88
AC012055.1-201ENST00000511346 SDK2Q58EX2 2172 aa3.28□□□□□ -1.88
AC012055.1-201ENST00000511346 KNDC1Q76NI1 1749 aa3.28□□□□□ -1.88
AC012055.1-201ENST00000511346 KIF21AQ7Z4S6 1674 aa3.28□□□□□ -1.88
AC012055.1-201ENST00000511346 SFTA3P0C7M3 94 aa3.28□□□□□ -1.88
AC012055.1-201ENST00000511346 DEFB121Q5J5C9 76 aa3.28□□□□□ -1.88
AC012055.1-201ENST00000511346 CDC42SE2Q9NRR3 84 aa3.28□□□□□ -1.88
AC012055.1-201ENST00000511346 MYO3AQ8NEV4 1616 aa3.27□□□□□ -1.89
AC012055.1-201ENST00000511346 ZNF815PA8K554 130 aa3.27□□□□□ -1.89
AC012055.1-201ENST00000511346 HIGD1CA8MV81 97 aa3.27□□□□□ -1.89
AC012055.1-201ENST00000511346 RTL8CO15255 209 aa3.27□□□□□ -1.89
AC012055.1-201ENST00000511346 DEFB134Q4QY38 66 aa3.27□□□□□ -1.89
AC012055.1-201ENST00000511346 KIAA2026Q5HYC2 2103 aa3.27□□□□□ -1.89
AC012055.1-201ENST00000511346 TRPM7Q96QT4 1865 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 HEATR5BQ9P2D3 2071 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 IGLV4-60A0A075B6I1 120 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 A0A1W2PNU3 283 aaPredicted RBP3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 IGHV3-30P01768 117 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 IGHV3-30-5P0DP03 117 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 SFTA2Q6UW10 78 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 PATE1Q8WXA2 126 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 LENEPQ9Y5L5 61 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 V9GYH0 126 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 MYO5CQ9NQX4 1742 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 MYH4Q9Y623 1939 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 TET3O43151 1660 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 PREX2Q70Z35 1606 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 MADDQ8WXG6 1647 aa3.26□□□□□ -1.89
AC012055.1-201ENST00000511346 PATJQ8NI35 1801 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms