RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 GNG4P50150 75 aa4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 BLOC1S1P78537 153 aa4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 PIK3CD-AS1Q5SR53 167 aa4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 OCC1Q8TAD7 63 aa4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 TNFRSF18Q9Y5U5 241 aa4.88□□□□□ -1.63
TOPBP1-207ENST00000509162 PKHD1L1Q86WI1 4243 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 TRBV6-4A0A1B0GX49 114 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 GAGE12JA6NER3 117 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 TMEM250H0YL14 139 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 OR5AL1P0C617 328 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 S100A4P26447 101 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 CCL18P55774 89 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 GAGE1Q13065 139 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 GAGE4Q13068 117 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 GAGE5Q13069 117 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 RHOHQ15669 191 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 ZFP2Q6ZN57 461 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 LINC01551Q86U37 167 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 OR2D3Q8NGH3 330 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 SMIM12Q96EX1 92 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 DNAJC30Q96LL9 226 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 Q9H8V8 135 aa4.87□□□□□ -1.63
TOPBP1-207ENST00000509162 A8MWV9 139 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 SRIP30626 198 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 MRPL23Q16540 153 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 FAM74A4Q5TZK3 123 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 NEGR1Q7Z3B1 354 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 ZFP82Q8N141 532 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 NEXN-AS1Q8NBZ9 246 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 CNFNQ9BYD5 112 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 RPP21Q9H633 154 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 PHLDA3Q9Y5J5 127 aa4.86□□□□□ -1.63
TOPBP1-207ENST00000509162 NDUFS6O75380 124 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 GAS8-AS1O95177 125 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 DNAH10OSP0CZ25 163 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 FUSP35637 526 aaKnown RBP eCLIP4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 TAGLN2P37802 199 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 CEBPGP53567 150 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 FOXA3P55318 350 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 UBE2D3P61077 147 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 SSTP61278 116 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 UBE2D2P62837 147 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 SUMO4Q6EEV6 95 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 LYZL1Q6UWQ5 148 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 C6orf223Q8N319 242 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 FER1L6-AS1Q8NA97 138 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 SMIM7Q9BQ49 75 aa4.85□□□□□ -1.63
TOPBP1-207ENST00000509162 MYCBP2O75592 4640 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 RHODO00212 210 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 SIVA1O15304 175 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 P01737 135 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 ADCYAP1P18509 176 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 RPL23P62829 140 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 SLAQ13239 276 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 SERTAD4-AS1Q5TG53 156 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 NTM-AS1Q6ZSK4 140 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 FAM231DQ6ZW35 169 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 OR10G8Q8NGN5 311 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 ISOC2Q96AB3 205 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 TPPP3Q9BW30 176 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 V9GYV3 84 aa4.84□□□□□ -1.63
TOPBP1-207ENST00000509162 IGHV3-38A0A0C4DH36 116 aa4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 EVI2AP22794 236 aa4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 WFDC2Q14508 124 aa4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 LINC01556Q5JQF7 62 aa4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 C1orf134Q5TEV5 83 aa4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 AP1S3Q96PC3 154 aa4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 EIF5A2Q9GZV4 153 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 LY96Q9Y6Y9 160 aa4.83□□□□□ -1.64
TOPBP1-207ENST00000509162 TRAV26-2A0A0B4J265 109 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 A0A1W2PPQ1 181 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 ZNF727A8MUV8 499 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 M0QY20 66 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 CIDEAO60543 219 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 ZNF56Q15929 161 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 LELP1Q5T871 98 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 SPANXN1Q5VSR9 72 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 LINC00336Q6ZUF6 198 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 ATP6V0E2Q8NHE4 81 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 PRADC1Q9BSG0 188 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 GTSF1LQ9H1H1 148 aa4.82□□□□□ -1.64
TOPBP1-207ENST00000509162 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 TRBV10-1A0A0K0K1A3 114 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 GATCO43716 136 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 IGHV3-30P01768 117 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 IGHV3-33P01772 117 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 MGPP08493 103 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 IGHV3-30-3P0DP02 117 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 IGHV3-30-5P0DP03 117 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 NTF3P20783 257 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 RPS20P60866 119 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 RAB4BP61018 213 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 TTC32Q5I0X7 151 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 CLLU1Q5K131 121 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 DAZ4Q86SG3 579 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 DEFB104AQ8WTQ1 72 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 RNF185Q96GF1 192 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 PGLYRP4Q96LB8 373 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 DAZ3Q9NR90 486 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms