RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CADP27708 2225 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 ANK2Q01484 3957 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 A0A0C4DFX4 3053 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 PKD1L1Q8TDX9 2849 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAH1Q9P2D7 4330 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SMG1Q96Q15 3661 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 A0A087WTM6 91 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 TMEM14DPA8MWL7 114 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SCGB1A1P11684 91 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPRR2EP22531 72 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPRR2DP22532 72 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPRR2BP35325 72 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPRR2AP35326 72 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 NPC2P61916 151 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 INSL4Q14641 139 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPANXN1Q5VSR9 72 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 RPL7L1Q6DKI1 246 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 Q6ZRX8 168 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 UBE2DNLQ8IWF7 75 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 MRPL40Q9NQ50 206 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 BATF3Q9NR55 127 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 LSM2Q9Y333 95 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 SVEP1Q4LDE5 3571 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 PLXNA2O75051 1894 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 URB1O60287 2271 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 FAT2Q9NYQ8 4349 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 NBEAL1Q6ZS30 2694 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 LPAP08519 4548 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 LAMA1P25391 3075 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 DAPK1P53355 1430 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 VIRMAQ69YN4 1812 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 COL6A5A8TX70 2615 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 AKAP13Q12802 2813 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
HMGB1P29-201ENST00000505659 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 CHD6Q8TD26 2715 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 DSPP15924 2871 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 WDR87Q6ZQQ6 2873 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 PTPN13Q12923 2485 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 DMXL2Q8TDJ6 3036 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 PDZD2O15018 2839 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 COL6A3P12111 3177 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAJC13O75165 2243 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 ERCC6Q03468 1493 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPENQ96T58 3664 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 A6NIN4 97 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 J3QR89 54 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 CFDP00746 253 aaPredicted RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 IFNA17P01571 189 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 SMIM6P0DI80 62 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 RBM3P98179 157 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 Q5VSD8 79 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 LINC01545Q5VT33 79 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 PYDC1Q8WXC3 89 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 Q96NJ1 140 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 RPRMQ9NS64 109 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 GSKIPQ9P0R6 139 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 NDUFA12Q9UI09 145 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 DCHS1Q96JQ0 3298 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 FLNCQ14315 2725 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 ITPR2Q14571 2701 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 MGAM2Q2M2H8 2515 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 PLECQ15149 4684 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 LRBAP50851 2863 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 AKAP9Q99996 3911 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 NSD1Q96L73 2696 aaPredicted RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 DISP2A7MBM2 1401 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 DYNC1H1Q14204 4646 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 RIF1Q5UIP0 2472 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 SSC5DA1L4H1 1573 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 ANK3Q12955 4377 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 RELNP78509 3460 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 EP300Q09472 2414 aaPredicted RBP-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 STAB2Q8WWQ8 2551 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 CACNA1CQ13936 2221 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPAG17Q6Q759 2223 aa-0.07□□□□□ -2.42
HMGB1P29-201ENST00000505659 ZFHX3Q15911 3703 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 SPTBN5Q9NRC6 3674 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 APC2O95996 2303 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PCNX1Q96RV3 2341 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 MUC17Q685J3 4493 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 KALRNO60229 2985 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAH3Q8TD57 4116 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 FLNAP21333 2647 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PIEZO2Q9H5I5 2752 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 TRANK1O15050 2925 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PKDREJQ9NTG1 2253 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 VPS13DQ5THJ4 4388 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 NCOR1O75376 2440 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 SONP18583 2426 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 CREBBPQ92793 2442 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAH7Q8WXX0 4024 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 DNAH6Q9C0G6 4158 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 TRGV1A0A0A0MS02 117 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PIN1P1O15428 100 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 NCR2O95944 276 aa-0.08□□□□□ -2.42
HMGB1P29-201ENST00000505659 PIPP12273 146 aaPredicted RBP-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms