RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ERHP84090 104 aaKnown RBP3.08□□□□□ -1.92
NIPBL-204ENST00000504430 ABCA8O94911 1581 aa3.08□□□□□ -1.92
NIPBL-204ENST00000504430 TNS1Q9HBL0 1735 aaKnown RBP3.08□□□□□ -1.92
NIPBL-204ENST00000504430 TRBV10-3A0A0K0K1G6 114 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 HMGN3Q15651 99 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 TMEM131LA2VDJ0 1609 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 COL27A1Q8IZC6 1860 aaPredicted RBP3.07□□□□□ -1.92
NIPBL-204ENST00000504430 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 COL2A1P02458 1487 aaPredicted RBP3.07□□□□□ -1.92
NIPBL-204ENST00000504430 FANCD2Q9BXW9 1451 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 ANKRD50Q9ULJ7 1429 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 NEXMIFQ5QGS0 1516 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 UMAD1C9J7I0 102 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 C20orf197Q8N268 126 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 HILPDAQ9Y5L2 63 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 PRRC2AP48634 2157 aaKnown RBP3.07□□□□□ -1.92
NIPBL-204ENST00000504430 KDM3BQ7LBC6 1761 aa3.07□□□□□ -1.92
NIPBL-204ENST00000504430 A0A087WSZ3 146 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 MIFP14174 115 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 ANKARQ7Z5J8 1434 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 COL5A3P25940 1745 aaPredicted RBP3.06□□□□□ -1.92
NIPBL-204ENST00000504430 CDC42BPBQ9Y5S2 1711 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 PDCD11Q14690 1871 aaKnown RBP3.06□□□□□ -1.92
NIPBL-204ENST00000504430 MED12Q93074 2177 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 LTBP2Q14767 1821 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 PLA2R1Q13018 1463 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 EDDM3BP56851 147 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 KIF25-AS1Q9Y6Z4 181 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 ABCA1O95477 2261 aa3.06□□□□□ -1.92
NIPBL-204ENST00000504430 CEP192Q8TEP8 1941 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 TOP2BQ02880 1626 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 FAM223BA6NKX1 122 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 F2Z2F3 143 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 BAALC-AS2P0C853 105 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 ZNF833PQ6ZTB9 187 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 PSENENQ9NZ42 101 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 LAMB4A4D0S4 1761 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 SCN11AQ9UI33 1791 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 TRAV12-1A0A0B4J245 112 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 IQCF6A8MYZ5 107 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 F8WEM9 126 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 MED13LQ71F56 2210 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 TRBV7-3A0A075B6L6 115 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 SMIM13P0DJ93 91 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 SPANXN5Q5MJ07 72 aa3.05□□□□□ -1.92
NIPBL-204ENST00000504430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.04□□□□□ -1.92
NIPBL-204ENST00000504430 UBE2D1P51668 147 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 UBE2D3P61077 147 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 UBE2D2P62837 147 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 FDCSPQ8NFU4 85 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 PRO1854Q9UHT4 67 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 KIAA1549LQ6ZVL6 1849 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 ARFGEF2Q9Y6D5 1785 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 NKTRP30414 1462 aaKnown RBP3.04□□□□□ -1.92
NIPBL-204ENST00000504430 IGKV3-15P01624 115 aa3.04□□□□□ -1.92
NIPBL-204ENST00000504430 ADAMTS9Q9P2N4 1935 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 ATP10BO94823 1461 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 DUOX2Q9NRD8 1548 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 A0A0G2JQZ4 141 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 MDKP21741 143 aaPredicted RBP3.03□□□□□ -1.92
NIPBL-204ENST00000504430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.03□□□□□ -1.92
NIPBL-204ENST00000504430 CYP4F30PQ9H0H9 118 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 KANTRA0A1W2PQU2 76 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 HRES1P13985 223 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 BLMP54132 1417 aaPredicted RBP3.03□□□□□ -1.92
NIPBL-204ENST00000504430 ITSN1Q15811 1721 aa3.03□□□□□ -1.92
NIPBL-204ENST00000504430 HMGXB3Q12766 1538 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 ZMYM4Q5VZL5 1548 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 TRBV7-1A0A0A6YYK4 115 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 GAS8-AS1O95177 125 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 CNBPP62633 177 aaKnown RBP3.02□□□□□ -1.93
NIPBL-204ENST00000504430 KLKP1Q107X0 134 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 VMO1Q7Z5L0 202 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 TIMM21Q9BVV7 248 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 STRCP1A6NGW2 1772 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 RTL8CO15255 209 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 CTSGP08311 255 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 PYDC2Q56P42 97 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 SLIT3O75094 1523 aa3.02□□□□□ -1.93
NIPBL-204ENST00000504430 BIVM-ERCC5R4GMW8 1640 aa3.01□□□□□ -1.93
NIPBL-204ENST00000504430 CUX1P39880 1505 aa3.01□□□□□ -1.93
NIPBL-204ENST00000504430 PIGBOS1A0A0B4J2F0 54 aa3.01□□□□□ -1.93
NIPBL-204ENST00000504430 TMEM30CPA0ZSE6 113 aa3.01□□□□□ -1.93
NIPBL-204ENST00000504430 KIF1AQ12756 1690 aa3.01□□□□□ -1.93
NIPBL-204ENST00000504430 SIP14410 1827 aa3.01□□□□□ -1.93
NIPBL-204ENST00000504430 NDUFC1O43677 76 aa3.01□□□□□ -1.93
NIPBL-204ENST00000504430 SNRPFP62306 86 aaKnown RBP3.01□□□□□ -1.93
NIPBL-204ENST00000504430 FN1P02751 2386 aaKnown RBP3.01□□□□□ -1.93
NIPBL-204ENST00000504430 M0R3E3 92 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 A0A087WWC5 75 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 SPACA4Q8TDM5 124 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 SCRT1Q9BWW7 348 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 LRRC7Q96NW7 1537 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 LAMB1P07942 1786 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 LINC00643Q86TS7 51 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 DEFB107AQ8IZN7 70 aa3□□□□□ -1.93
NIPBL-204ENST00000504430 MRPL36Q9P0J6 103 aaKnown RBP3□□□□□ -1.93
NIPBL-204ENST00000504430 RGPD2P0DJD1 1756 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms