RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GGNQ86UU5 652 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 Q8N3U1 123 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 ZNRF1Q8ND25 227 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 SMCR5Q8TEV8 140 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 B9D2Q9BPU9 175 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 PATJQ8NI35 1801 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV3D-11A0A0A0MRZ8 115 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 C16orf97H3BN30 126 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 H3BQ85 93 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV3-11P04433 115 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 FAM229AH3BQW9 127 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 C1orf134Q5TEV5 83 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 LINC00208Q96KT6 92 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 ARTNQ5T4W7 220 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 SPATA3Q8NHX4 192 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 URB1-AS1Q96HZ7 61 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 SPTA1P02549 2419 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 PRR3P79522 188 aaKnown RBP4.6□□□□□ -1.67
CLCN3-204ENST00000504131 MED12LQ86YW9 2145 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 HEATR1Q9H583 2144 aaKnown RBP4.6□□□□□ -1.67
CLCN3-204ENST00000504131 TRBV6-8A0A0A6YYG3 113 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 INSP01308 110 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 KLKP1Q107X0 134 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 COX7B2Q8TF08 81 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 TDRD15B5MCY1 1934 aaKnown RBP4.6□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV3D-15A0A087WSY6 115 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV3-15P01624 115 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 KNL1Q8NG31 2342 aa4.6□□□□□ -1.67
CLCN3-204ENST00000504131 IGLV5-45A0A087WSX0 123 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 ATP6V0E1O15342 81 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 Q1T7F1 81 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 C22orf34Q6ZV56 151 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 APELAP0DMC3 54 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 C11orf72Q8NBR9 251 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 TRPM6Q9BX84 2022 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 PTPRDP23468 1912 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 E7EQL1 145 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 TSPEAR-AS2P59090 65 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 PRO3102Q9H379 93 aa4.59□□□□□ -1.67
CLCN3-204ENST00000504131 TPRP12270 2363 aaKnown RBP4.59□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV1-27A0A075B6S5 117 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 TNP2Q05952 138 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 HIGD2AQ9BW72 106 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 MYO7BQ6PIF6 2116 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 IGHV3-73A0A0B4J1V6 119 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 IGHV3-30-3P0DP02 117 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 HCP5Q6MZN7 132 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 VMO1Q7Z5L0 202 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 RITA1Q96K30 269 aa4.59□□□□□ -1.68
CLCN3-204ENST00000504131 DOCK4Q8N1I0 1966 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 CACNA1GO43497 2377 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 IGKV1D-17A0A075B6S4 117 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 TRBV6-6A0A0A6YYG2 114 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 IGHV4-28A0A0C4DH34 117 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 DNAJC9-AS1A6NH13 148 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 ERC2-IT1O76042 136 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 IGHV1-46P01743 117 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 C14orf178Q8N769 122 aaPredicted RBP4.58□□□□□ -1.68
CLCN3-204ENST00000504131 ATG2AQ2TAZ0 1938 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 IGHV4-30-2A0A087WSY4 118 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 IGKV2-40A0A087WW87 121 aaPredicted RBP4.58□□□□□ -1.68
CLCN3-204ENST00000504131 TRAV10A0A0B4J240 114 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 IGKV2D-40P01614 121 aaPredicted RBP4.58□□□□□ -1.68
CLCN3-204ENST00000504131 IGFL3Q6UXB1 125 aa4.58□□□□□ -1.68
CLCN3-204ENST00000504131 DEFB121Q5J5C9 76 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 Q6ZS46 218 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 GREB1Q4ZG55 1949 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 APC2O95996 2303 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 PHF3Q92576 2039 aaKnown RBP4.57□□□□□ -1.68
CLCN3-204ENST00000504131 IGHV3-49A0A0A0MS15 119 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 SLPIP03973 132 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 ZNF524Q96C55 264 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 LINC00467Q9BRT7 94 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 SND1-IT1Q9HBX3 110 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 FNDC1Q4ZHG4 1894 aaPredicted RBP4.57□□□□□ -1.68
CLCN3-204ENST00000504131 NCOR1O75376 2440 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 A6NDX4 124 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 HTN1P15515 57 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 Q6ZSV7 163 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 Q8N9W7 124 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 FAM186AA6NE01 2351 aa4.57□□□□□ -1.68
CLCN3-204ENST00000504131 CTSZQ9UBR2 303 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 TDRD6O60522 2096 aaKnown RBP4.56□□□□□ -1.68
CLCN3-204ENST00000504131 NDUFA4O00483 81 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 PHF5AQ7RTV0 110 aaKnown RBP4.56□□□□□ -1.68
CLCN3-204ENST00000504131 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 E7EUB6 86 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 ZNF491Q8N8L2 437 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 CABIN1Q9Y6J0 2220 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 LTBP2Q14767 1821 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 PLA2G2CQ5R387 149 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 ALPK3Q96L96 1907 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 RIF1Q5UIP0 2472 aaKnown RBP4.56□□□□□ -1.68
CLCN3-204ENST00000504131 ADAMTSL4-AS1Q5T5F5 129 aa4.56□□□□□ -1.68
CLCN3-204ENST00000504131 PLXNA3P51805 1871 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 HELZP42694 1942 aaKnown RBP4.55□□□□□ -1.68
CLCN3-204ENST00000504131 IGHV4OR15-8A0A075B7B6 117 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms