RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 INSL4Q14641 139 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 C9orf116Q5BN46 136 aaPredicted RBP1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 SLC48A1Q6P1K1 146 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 NDUFA11Q86Y39 141 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 PATE1Q8WXA2 126 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 LINC00052Q96N35 136 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 VAMP8Q9BV40 100 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 ORMDL1Q9P0S3 153 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 CEP290O15078 2479 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 ATG2AQ2TAZ0 1938 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 CASZ1Q86V15 1759 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 NUP188Q5SRE5 1749 aa1.52□□□□□ -2.17
SMNDC1-205ENST00000477763 CTTNBP2Q8WZ74 1663 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 NKTRP30414 1462 aaKnown RBP1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 C10orf71Q711Q0 1435 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 CXorf51AA0A1B0GTR3 108 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 RBAKDNA6NC62 111 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 A6NIN4 97 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 MT-ATP8P03928 68 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 IGLC1P0CG04 106 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 SLC25A6P12236 298 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 UBE2G1P62253 170 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 RPL7L1Q6DKI1 246 aaKnown RBP1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 UNQ5815/PRO19632Q6UWF5 114 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 COMMD6Q7Z4G1 85 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 ATG5Q9H1Y0 275 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 C22orf24Q9Y442 160 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 TNS1Q9HBL0 1735 aaKnown RBP1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 FBN3Q75N90 2809 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 UNC13BO14795 1591 aa1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 INO80Q9ULG1 1556 aaPredicted RBP1.51□□□□□ -2.17
SMNDC1-205ENST00000477763 TRPM2O94759 1503 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 KCPQ6ZWJ8 1503 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 CR1P17927 2039 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 HEATR5AQ86XA9 2040 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 CCDC88CQ9P219 2028 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 CCDC18Q5T9S5 1454 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 FYCO1Q9BQS8 1478 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 ABCC5O15440 1437 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 CPSF1Q10570 1443 aaKnown RBP1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 CASKIN1Q8WXD9 1431 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 CPAMD8Q8IZJ3 1885 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 RGPD8O14715 1765 aaPredicted RBP1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 COL24A1Q17RW2 1714 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 SPHKAPQ2M3C7 1700 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 TRBV6-8A0A0A6YYG3 113 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 A0A0J9YY99 117 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 TMEM30CPA0ZSE6 113 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 ANGP03950 147 aaKnown RBP1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 RBM3P98179 157 aaKnown RBP1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 Q0VG73 95 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 SPRNQ5BIV9 151 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 FAM74A1Q5RGS3 127 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 LINC00299Q6ZSB3 139 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 LCN9Q8WX39 176 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 CYSTM1Q9H1C7 97 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 MRPL35Q9NZE8 188 aaKnown RBP1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 LMTK2Q8IWU2 1503 aa1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 ZFHX2Q9C0A1 2572 aaPredicted RBP1.5□□□□□ -2.17
SMNDC1-205ENST00000477763 ZFC3H1O60293 1989 aaKnown RBP1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 TMEM131LA2VDJ0 1609 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 PREX2Q70Z35 1606 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 MYH6P13533 1939 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 TRBV10-1A0A0K0K1A3 114 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 TRBV10-3A0A0K0K1G6 114 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 H3BRM9 83 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 CCKP06307 115 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 IL7P13232 177 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 PYY3Q5JQD4 70 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 C10orf55Q5SWW7 151 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 S100A7L2Q5SY68 101 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 LYPD5Q6UWN5 251 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 COL6A3P12111 3177 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 ARHGEF5Q12774 1597 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 DUOX2Q9NRD8 1548 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 FN1P02751 2386 aaKnown RBP1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 RGPD1P0DJD0 1748 aa1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 MARF1Q9Y4F3 1742 aaKnown RBP1.49□□□□□ -2.17
SMNDC1-205ENST00000477763 TTC28Q96AY4 2481 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 MYH13Q9UKX3 1938 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 NRXN3Q9Y4C0 1643 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 MGAMO43451 1857 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 SBF2Q86WG5 1849 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 TRBV6-4A0A1B0GX49 114 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 NUPR1O60356 82 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 IGHV3-30P01768 117 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 IGKCP01834 107 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 IGHV3-30-5P0DP03 117 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 RNASE3P12724 160 aaKnown RBP1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 SNCAP37840 140 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 ASIPP42127 132 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 CCL8P80075 99 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 C15orf53Q8NAA6 179 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 CYP4F30PQ9H0H9 118 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 PTPRBP23467 1997 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 CCDC141Q6ZP82 1450 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 RREB1Q92766 1687 aa1.48□□□□□ -2.17
SMNDC1-205ENST00000477763 KIAA0100Q14667 2235 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms