RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 H3BT86 120 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 IGHV3-11P01762 117 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 IGHV3-30-3P0DP02 117 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 TIMM21Q9BVV7 248 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 SPXQ9BT56 116 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 BDP1A6H8Y1 2624 aa10.19□□□□□ -0.78
PTPRE-204ENST00000455661 IGHV3-16A0A0C4DH30 117 aa10.18□□□□□ -0.78
PTPRE-204ENST00000455661 H7C423 109 aa10.18□□□□□ -0.78
PTPRE-204ENST00000455661 DAZ1Q9NQZ3 744 aaKnown RBP10.18□□□□□ -0.78
PTPRE-204ENST00000455661 CACNA1HO95180 2353 aa10.18□□□□□ -0.78
PTPRE-204ENST00000455661 DMXL1Q9Y485 3027 aa10.17□□□□□ -0.78
PTPRE-204ENST00000455661 H3BUA1 57 aa10.17□□□□□ -0.78
PTPRE-204ENST00000455661 ANKHD1Q8IWZ3 2542 aaKnown RBP10.17□□□□□ -0.78
PTPRE-204ENST00000455661 ADARB2-AS1A8MUL3 147 aa10.17□□□□□ -0.78
PTPRE-204ENST00000455661 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
PTPRE-204ENST00000455661 SPANXCQ9NY87 97 aa10.17□□□□□ -0.78
PTPRE-204ENST00000455661 ZNF580Q9UK33 172 aa10.17□□□□□ -0.78
PTPRE-204ENST00000455661 PF4V1P10720 104 aa10.16□□□□□ -0.78
PTPRE-204ENST00000455661 CACNA1BQ00975 2339 aa10.16□□□□□ -0.78
PTPRE-204ENST00000455661 LITAFQ99732 161 aa10.16□□□□□ -0.78
PTPRE-204ENST00000455661 LRBAP50851 2863 aa10.16□□□□□ -0.78
PTPRE-204ENST00000455661 FAM240AA0A1B0GVK7 77 aa10.16□□□□□ -0.78
PTPRE-204ENST00000455661 CD28P10747 220 aa10.16□□□□□ -0.78
PTPRE-204ENST00000455661 BRI3O95415 125 aa10.15□□□□□ -0.78
PTPRE-204ENST00000455661 FOXC1Q12948 553 aa10.15□□□□□ -0.78
PTPRE-204ENST00000455661 CDSNQ15517 529 aa10.15□□□□□ -0.78
PTPRE-204ENST00000455661 FAM110AQ9BQ89 295 aa10.15□□□□□ -0.78
PTPRE-204ENST00000455661 YAE1D1Q9NRH1 226 aa10.15□□□□□ -0.78
PTPRE-204ENST00000455661 NDUFA12Q9UI09 145 aa10.15□□□□□ -0.78
PTPRE-204ENST00000455661 DCHS2Q6V1P9 2916 aa10.15□□□□□ -0.79
PTPRE-204ENST00000455661 IGHV1-58A0A0C4DH39 117 aa10.15□□□□□ -0.79
PTPRE-204ENST00000455661 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.79
PTPRE-204ENST00000455661 MIAQ16674 131 aa10.15□□□□□ -0.79
PTPRE-204ENST00000455661 PYGO1Q9Y3Y4 419 aa10.15□□□□□ -0.79
PTPRE-204ENST00000455661 LMO4P61968 165 aa10.14□□□□□ -0.79
PTPRE-204ENST00000455661 ANKRD11Q6UB99 2663 aaPredicted RBP10.14□□□□□ -0.79
PTPRE-204ENST00000455661 IGHV1OR15-1A0A075B7D0 117 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 IGHV3OR16-10A0A075B7F0 116 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 SMIM20Q8N5G0 67 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 DCANP1Q8TF63 244 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 ATMQ13315 3056 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 TRAV12-2A0A075B6T6 113 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 LST1O00453 97 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 DEFB121Q5J5C9 76 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 ADAMTSL4-AS1Q5T5F5 129 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 CLEC2BQ92478 149 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 DUX3Q96PT4 197 aa10.13□□□□□ -0.79
PTPRE-204ENST00000455661 K7EMT4 169 aa10.12□□□□□ -0.79
PTPRE-204ENST00000455661 ADORA2A-AS1P86434 159 aa10.12□□□□□ -0.79
PTPRE-204ENST00000455661 BPESC1Q9GZL8 116 aa10.12□□□□□ -0.79
PTPRE-204ENST00000455661 UBTD1Q9HAC8 227 aa10.12□□□□□ -0.79
PTPRE-204ENST00000455661 IGKV3-20P01619 116 aa10.12□□□□□ -0.79
PTPRE-204ENST00000455661 IGHG2P01859 326 aa10.11□□□□□ -0.79
PTPRE-204ENST00000455661 NPC2P61916 151 aa10.11□□□□□ -0.79
PTPRE-204ENST00000455661 TMEM61Q8N0U2 210 aa10.11□□□□□ -0.79
PTPRE-204ENST00000455661 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
PTPRE-204ENST00000455661 MED13LQ71F56 2210 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 TRGV11A0A075B6L2 103 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 SNRPD3P62318 126 aaKnown RBP10.1□□□□□ -0.79
PTPRE-204ENST00000455661 HERV-K104P63124 156 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 LY6EQ16553 131 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 TRBV7-7A0A0K0K1E9 115 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 TINCRA0A1B0GVN0 87 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 K7ENP7 123 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 TMEM101Q96IK0 257 aa10.1□□□□□ -0.79
PTPRE-204ENST00000455661 SPTBN2O15020 2390 aa10.09□□□□□ -0.79
PTPRE-204ENST00000455661 AKAP13Q12802 2813 aa10.09□□□□□ -0.79
PTPRE-204ENST00000455661 EDN2P20800 178 aa10.09□□□□□ -0.79
PTPRE-204ENST00000455661 BRD3OSQ6XYD6 125 aa10.09□□□□□ -0.79
PTPRE-204ENST00000455661 Q6ZSV7 163 aa10.09□□□□□ -0.79
PTPRE-204ENST00000455661 CHCHD5Q9BSY4 110 aa10.09□□□□□ -0.79
PTPRE-204ENST00000455661 PRRC2AP48634 2157 aaKnown RBP10.09□□□□□ -0.79
PTPRE-204ENST00000455661 TIMM17BO60830 172 aa10.08□□□□□ -0.8
PTPRE-204ENST00000455661 ACYP1P07311 99 aa10.08□□□□□ -0.8
PTPRE-204ENST00000455661 TNFRSF18Q9Y5U5 241 aa10.08□□□□□ -0.8
PTPRE-204ENST00000455661 GVINP1Q7Z2Y8 2422 aa10.08□□□□□ -0.8
PTPRE-204ENST00000455661 SPINK13Q1W4C9 94 aa10.08□□□□□ -0.8
PTPRE-204ENST00000455661 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-204ENST00000455661 TMEM126AQ9H061 195 aa10.08□□□□□ -0.8
PTPRE-204ENST00000455661 A0A1W2PPR1 153 aa10.07□□□□□ -0.8
PTPRE-204ENST00000455661 IGLV1-40P01703 118 aa10.07□□□□□ -0.8
PTPRE-204ENST00000455661 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
PTPRE-204ENST00000455661 FAM104AQ969W3 186 aa10.07□□□□□ -0.8
PTPRE-204ENST00000455661 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
PTPRE-204ENST00000455661 CIRBPQ14011 172 aaKnown RBP10.06□□□□□ -0.8
PTPRE-204ENST00000455661 IMUPQ9GZP8 106 aa10.06□□□□□ -0.8
PTPRE-204ENST00000455661 A8MZ25 164 aa10.06□□□□□ -0.8
PTPRE-204ENST00000455661 H3BUX3 64 aa10.06□□□□□ -0.8
PTPRE-204ENST00000455661 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
PTPRE-204ENST00000455661 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
PTPRE-204ENST00000455661 IGHV3-73A0A0B4J1V6 119 aa10.05□□□□□ -0.8
PTPRE-204ENST00000455661 BLCAPP62952 87 aa10.05□□□□□ -0.8
PTPRE-204ENST00000455661 A6NDX4 124 aa10.05□□□□□ -0.8
PTPRE-204ENST00000455661 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
PTPRE-204ENST00000455661 K7EQG2 157 aa10.03□□□□□ -0.8
PTPRE-204ENST00000455661 NDUFA1O15239 70 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms