RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	TMEM242	Q9NWH2	141 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	SCGB1D1	O95968	90 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	LGALS3	P17931	250 aa	Known RBP	6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	LINC00158	P58513	81 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	TMEM170A	Q8WVE7	144 aa		6.16	□□□□□ -1.42
HCG18-238	ENST00000449544	TRBV10-1	A0A0K0K1A3	114 aa		6.15	□□□□□ -1.42
HCG18-238	ENST00000449544	NXT2	Q9NPJ8	142 aa	Known RBP	6.15	□□□□□ -1.42
HCG18-238	ENST00000449544	TP53TG3	Q9ULZ0	132 aa		6.15	□□□□□ -1.42
HCG18-238	ENST00000449544	KIR3DS1	Q14943	382 aa		6.15	□□□□□ -1.43
HCG18-238	ENST00000449544	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.15	□□□□□ -1.43
HCG18-238	ENST00000449544	ARL6IP6	Q8N6S5	226 aa		6.14	□□□□□ -1.43
HCG18-238	ENST00000449544	HSPB8	Q9UJY1	196 aa		6.14	□□□□□ -1.43
HCG18-238	ENST00000449544	ADGRG4	Q8IZF6	3080 aa		6.14	□□□□□ -1.43
HCG18-238	ENST00000449544	LINC00862	A6NCI5	91 aa		6.14	□□□□□ -1.43
HCG18-238	ENST00000449544	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
HCG18-238	ENST00000449544	DNAJC30	Q96LL9	226 aa		6.14	□□□□□ -1.43
HCG18-238	ENST00000449544	CELSR2	Q9HCU4	2923 aa		6.14	□□□□□ -1.43
HCG18-238	ENST00000449544	ZNF705A	Q6ZN79	300 aa	Predicted RBP	6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	TIRAP	P58753	221 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	C12orf74	Q32Q52	190 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	CLLU1	Q5K131	121 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	AMN1	Q8IY45	258 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	C6orf223	Q8N319	242 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	C5orf38	Q86SI9	138 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	LINC01549	A6NIU2	74 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	FAM229A	H3BQW9	127 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	ATRAID	Q6UW56	229 aa		6.13	□□□□□ -1.43
HCG18-238	ENST00000449544	C1orf158	Q8N1D5	194 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	JPT2	Q9H910	190 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.12	□□□□□ -1.43
HCG18-238	ENST00000449544		D6R8Y8	96 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	SMKR1	H3BMG3	65 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	HOXA5	P20719	270 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	PDZD11	Q5EBL8	140 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	S100A7L2	Q5SY68	101 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	SLC25A29	Q8N8R3	303 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	C12orf57	Q99622	126 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	TRBV6-4	A0A1B0GX49	114 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	TMEM218	A2RU14	115 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	COX7A2L	O14548	114 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	GAGE2E	Q4V326	116 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	SMIM12	Q96EX1	92 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	FAM167A-AS1	Q96KT0	104 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	GAGE2D	Q9UEU5	116 aa		6.12	□□□□□ -1.43
HCG18-238	ENST00000449544	TRAV26-2	A0A0B4J265	109 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	SRP19	P09132	144 aa	Known RBP	6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	LELP1	Q5T871	98 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544		Q8N976	141 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	RASL10A	Q92737	203 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	TM2D3	Q9BRN9	247 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	MRPL18	Q9H0U6	180 aa	Known RBP	6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	TRAV8-2	A0A0B4J237	113 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	TRAV1-1	A0A0B4J248	108 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	TDRG1	Q3Y452	100 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	CASC10	Q5T4H9	136 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	LINC00269	Q8N2A0	174 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	CELA1	Q9UNI1	258 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544		J3QL48	77 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	RPL23	P62829	140 aa	Known RBP	6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	COPS9	Q8WXC6	57 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	PTTG1IP	P53801	180 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	C19orf73	Q9NVV2	129 aa		6.11	□□□□□ -1.43
HCG18-238	ENST00000449544	LRBA	P50851	2863 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	IGHV3-64	A0A075B6Q5	118 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	EDA2R	Q9HAV5	297 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	LEPROTL1	O95214	131 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	LAGE3	Q14657	143 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	HIGD2B	Q4VC39	106 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	C4orf48	Q5BLP8	95 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	PRSS46	E5RG02	174 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	RBMY1A1	P0DJD3	496 aa	Known RBP	6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	RBMY1C	P0DJD4	496 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	RBMY1F	Q15415	496 aa	Known RBP	6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	CST9L	Q9H4G1	147 aa		6.1	□□□□□ -1.43
HCG18-238	ENST00000449544	DCHS1	Q96JQ0	3298 aa		6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	REG3A	Q06141	175 aa		6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	IMMP2L	Q96T52	175 aa		6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	LINC00587	B1AMM8	73 aa		6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	NMU	P48645	174 aa		6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	RNASE13	Q5GAN3	156 aa	Known RBP	6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	ZFAND2A	Q8N6M9	145 aa		6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	ORAOV1	Q8WV07	137 aa		6.09	□□□□□ -1.43
HCG18-238	ENST00000449544	GAGE12H	A6NDE8	117 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	TNFRSF6B	O95407	300 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	FGF6	P10767	208 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	PFN2	P35080	140 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	LINC00518	Q8N0U6	118 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	LYPD6B	Q8NI32	183 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	ZAN	Q9Y493	2812 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	MIA	Q16674	131 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	LGALS9C	Q6DKI2	356 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	CBLN2	Q8IUK8	224 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	NDUFA1	O15239	70 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	IGLV2-8	P01709	118 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	MAJIN	Q3KP22	176 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	SUMO4	Q6EEV6	95 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	LTA	P01374	205 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	ZFP2	Q6ZN57	461 aa		6.08	□□□□□ -1.44
HCG18-238	ENST00000449544	BAALC	Q8WXS3	180 aa		6.08	□□□□□ -1.44

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