RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 COLCA2A8K830 154 aa12.21□□□□□ -0.45
CCDC188-201ENST00000439765 CIDEAO60543 219 aa12.21□□□□□ -0.45
CCDC188-201ENST00000439765 GYPEP15421 78 aa12.21□□□□□ -0.45
CCDC188-201ENST00000439765 GATA1P15976 413 aaPredicted RBP12.21□□□□□ -0.45
CCDC188-201ENST00000439765 COX19Q49B96 90 aa12.21□□□□□ -0.45
CCDC188-201ENST00000439765 FAM74A4Q5TZK3 123 aa12.21□□□□□ -0.45
CCDC188-201ENST00000439765 ZFP2Q6ZN57 461 aa12.21□□□□□ -0.45
CCDC188-201ENST00000439765 KIAA1109Q2LD37 5005 aa12.21□□□□□ -0.45
CCDC188-201ENST00000439765 DNAH2Q9P225 4427 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 K7EQD1 137 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 RHODO00212 210 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 RAB4BP61018 213 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 TMEM136Q6ZRR5 245 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 ZNRF2Q8NHG8 242 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 GNB1LQ9BYB4 327 aa12.21□□□□□ -0.46
CCDC188-201ENST00000439765 SRIP30626 198 aa12.2□□□□□ -0.46
CCDC188-201ENST00000439765 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
CCDC188-201ENST00000439765 FAM104BQ5XKR9 115 aa12.2□□□□□ -0.46
CCDC188-201ENST00000439765 RAB4AP20338 218 aa12.19□□□□□ -0.46
CCDC188-201ENST00000439765 AMN1Q8IY45 258 aa12.19□□□□□ -0.46
CCDC188-201ENST00000439765 SLC25A29Q8N8R3 303 aa12.19□□□□□ -0.46
CCDC188-201ENST00000439765 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
CCDC188-201ENST00000439765 A0A1B0GVY2 172 aa12.18□□□□□ -0.46
CCDC188-201ENST00000439765 MGPP08493 103 aa12.18□□□□□ -0.46
CCDC188-201ENST00000439765 MRPS16Q9Y3D3 137 aaKnown RBP12.18□□□□□ -0.46
CCDC188-201ENST00000439765 F5H697 171 aa12.17□□□□□ -0.46
CCDC188-201ENST00000439765 RTL8CO15255 209 aa12.17□□□□□ -0.46
CCDC188-201ENST00000439765 HLA-DQA1P01909 254 aa12.17□□□□□ -0.46
CCDC188-201ENST00000439765 ZNF56Q15929 161 aa12.17□□□□□ -0.46
CCDC188-201ENST00000439765 Q6ZR54 194 aa12.17□□□□□ -0.46
CCDC188-201ENST00000439765 PKHD1P08F94 4074 aa12.17□□□□□ -0.46
CCDC188-201ENST00000439765 MT-ND6P03923 174 aa12.16□□□□□ -0.46
CCDC188-201ENST00000439765 RHOHQ15669 191 aa12.16□□□□□ -0.46
CCDC188-201ENST00000439765 MRPL51Q4U2R6 128 aaKnown RBP12.16□□□□□ -0.46
CCDC188-201ENST00000439765 Q6ZSN1 163 aa12.16□□□□□ -0.46
CCDC188-201ENST00000439765 NEGR1Q7Z3B1 354 aa12.16□□□□□ -0.46
CCDC188-201ENST00000439765 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
CCDC188-201ENST00000439765 FRZBQ92765 325 aa12.15□□□□□ -0.46
CCDC188-201ENST00000439765 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
CCDC188-201ENST00000439765 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
CCDC188-201ENST00000439765 Q9H8V8 135 aa12.15□□□□□ -0.46
CCDC188-201ENST00000439765 RAB5AP20339 215 aa12.14□□□□□ -0.47
CCDC188-201ENST00000439765 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
CCDC188-201ENST00000439765 MRPL18Q9H0U6 180 aaKnown RBP12.14□□□□□ -0.47
CCDC188-201ENST00000439765 TRAPPC1Q9Y5R8 145 aa12.14□□□□□ -0.47
CCDC188-201ENST00000439765 NBDYA0A0U1RRE5 68 aa12.14□□□□□ -0.47
CCDC188-201ENST00000439765 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
CCDC188-201ENST00000439765 APCSP02743 223 aa12.14□□□□□ -0.47
CCDC188-201ENST00000439765 RPS10P46783 165 aaKnown RBP12.14□□□□□ -0.47
CCDC188-201ENST00000439765 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
CCDC188-201ENST00000439765 TRAV26-2A0A0B4J265 109 aa12.13□□□□□ -0.47
CCDC188-201ENST00000439765 M0QY20 66 aa12.13□□□□□ -0.47
CCDC188-201ENST00000439765 MRAP2Q96G30 205 aa12.13□□□□□ -0.47
CCDC188-201ENST00000439765 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
CCDC188-201ENST00000439765 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
CCDC188-201ENST00000439765 H7C1H1 209 aa12.11□□□□□ -0.47
CCDC188-201ENST00000439765 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
CCDC188-201ENST00000439765 CKS2P33552 79 aa12.11□□□□□ -0.47
CCDC188-201ENST00000439765 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
CCDC188-201ENST00000439765 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
CCDC188-201ENST00000439765 DNAH11Q96DT5 4516 aa12.1□□□□□ -0.47
CCDC188-201ENST00000439765 D6R8Y8 96 aa12.1□□□□□ -0.47
CCDC188-201ENST00000439765 PPBPP02775 128 aa12.1□□□□□ -0.47
CCDC188-201ENST00000439765 SH2D6Q7Z4S9 175 aa12.1□□□□□ -0.47
CCDC188-201ENST00000439765 Q9UF83 564 aa12.1□□□□□ -0.47
CCDC188-201ENST00000439765 PKD1P98161 4303 aa12.1□□□□□ -0.47
CCDC188-201ENST00000439765 GAGE12JA6NER3 117 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 NCR2O95944 276 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 GAGE1Q13065 139 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 GAGE4Q13068 117 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 GAGE5Q13069 117 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 GAGE13Q4V321 117 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 WFDC10BQ8IUB3 73 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
CCDC188-201ENST00000439765 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.09□□□□□ -0.47
CCDC188-201ENST00000439765 TRBV10-1A0A0K0K1A3 114 aa12.08□□□□□ -0.47
CCDC188-201ENST00000439765 SIVA1O15304 175 aa12.08□□□□□ -0.47
CCDC188-201ENST00000439765 TRGC2P03986 189 aa12.08□□□□□ -0.47
CCDC188-201ENST00000439765 TTC32Q5I0X7 151 aa12.08□□□□□ -0.47
CCDC188-201ENST00000439765 C1orf134Q5TEV5 83 aa12.08□□□□□ -0.47
CCDC188-201ENST00000439765 KRTAP17-1Q9BYP8 105 aa12.08□□□□□ -0.47
CCDC188-201ENST00000439765 NIT2Q9NQR4 276 aa12.08□□□□□ -0.47
CCDC188-201ENST00000439765 DYNC1H1Q14204 4646 aaKnown RBP12.08□□□□□ -0.48
CCDC188-201ENST00000439765 NRACQ8N912 160 aa12.08□□□□□ -0.48
CCDC188-201ENST00000439765 NEXN-AS1Q8NBZ9 246 aa12.08□□□□□ -0.48
CCDC188-201ENST00000439765 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
CCDC188-201ENST00000439765 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
CCDC188-201ENST00000439765 PPP1R17O96001 155 aa12.07□□□□□ -0.48
CCDC188-201ENST00000439765 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
CCDC188-201ENST00000439765 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
CCDC188-201ENST00000439765 ATP6V0E2Q8NHE4 81 aa12.07□□□□□ -0.48
CCDC188-201ENST00000439765 DNAJC30Q96LL9 226 aa12.07□□□□□ -0.48
CCDC188-201ENST00000439765 PHOX2AO14813 284 aa12.06□□□□□ -0.48
CCDC188-201ENST00000439765 ALKBH7Q9BT30 221 aaPredicted RBP12.06□□□□□ -0.48
CCDC188-201ENST00000439765 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
CCDC188-201ENST00000439765 TRBV7-3A0A075B6L6 115 aa12.05□□□□□ -0.48
CCDC188-201ENST00000439765 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
CCDC188-201ENST00000439765 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
CCDC188-201ENST00000439765 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms