RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 KCNIP4Q6PIL6 250 aa6.4□□□□□ -1.38
RFFL-203ENST00000413582 Q6ZQT7 251 aa6.4□□□□□ -1.38
RFFL-203ENST00000413582 Q6ZSA8 131 aa6.4□□□□□ -1.38
RFFL-203ENST00000413582 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.38
RFFL-203ENST00000413582 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
RFFL-203ENST00000413582 SMIM27A0A1W2PRY6 76 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 ORM1P02763 201 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 CRYGDP07320 174 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 FHL2Q14192 279 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 WDR73Q6P4I2 378 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 FAM159AQ6UWV7 190 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 C10orf126Q8N4M7 172 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 Q8N814 137 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 MRPL16Q9NX20 251 aaKnown RBP6.39□□□□□ -1.39
RFFL-203ENST00000413582 TP53TG3Q9ULZ0 132 aa6.39□□□□□ -1.39
RFFL-203ENST00000413582 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 IGKV3D-20A0A0C4DH25 116 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 F2Z2F3 143 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 K7EQD1 137 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 SRIP30626 198 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 SLAQ13239 276 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 NAT8BQ9UHF3 227 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 HHLA3Q9XRX5 114 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
RFFL-203ENST00000413582 TRGV11A0A075B6L2 103 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 IGHV1OR15-1A0A075B7D0 117 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 A0A1B0GW15 77 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 PSCAO43653 123 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 OR5AL1P0C617 328 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 KRTAP10-4P60372 401 aaPredicted RBP6.37□□□□□ -1.39
RFFL-203ENST00000413582 ELOBQ15370 118 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 COX19Q49B96 90 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 RASL11AQ6T310 242 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 YPEL4Q96NS1 127 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
RFFL-203ENST00000413582 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
RFFL-203ENST00000413582 HIGD1CA8MV81 97 aa6.36□□□□□ -1.39
RFFL-203ENST00000413582 SNAI2O43623 268 aa6.36□□□□□ -1.39
RFFL-203ENST00000413582 IGLC6P0CF74 106 aa6.36□□□□□ -1.39
RFFL-203ENST00000413582 GYPEP15421 78 aa6.36□□□□□ -1.39
RFFL-203ENST00000413582 CNFNQ9BYD5 112 aa6.36□□□□□ -1.39
RFFL-203ENST00000413582 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 SCO1O75880 301 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 OXTP01178 125 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 TYMSP04818 313 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 S100A8P05109 93 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 S100A4P26447 101 aaKnown RBP6.35□□□□□ -1.39
RFFL-203ENST00000413582 CTRLP40313 264 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 ASIPP42127 132 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 CACNG7P62955 275 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 WFDC2Q14508 124 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 PIK3CD-AS1Q5SR53 167 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 MUC21Q5SSG8 566 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 CBLN2Q8IUK8 224 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 FER1L6-AS1Q8NA97 138 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 GTSF1Q8WW33 167 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 PTH2Q96A98 100 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 BORCS7Q96B45 105 aa6.35□□□□□ -1.39
RFFL-203ENST00000413582 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 A0A1B0GUT8 65 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 COLCA2A8K830 154 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 ZNF415Q09FC8 603 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 RIGQ13278 110 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 SCXQ7RTU7 201 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 SPXQ9BT56 116 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 Q9HAA7 133 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 NAGKQ9UJ70 344 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 URGCP-MRPS24S4R325 110 aa6.34□□□□□ -1.39
RFFL-203ENST00000413582 TMSB15BA0A087X1C1 80 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 IGHV3-16A0A0C4DH30 117 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 IGHV3-38A0A0C4DH36 116 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 GNRH2O43555 120 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 ARMS2P0C7Q2 107 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 GZMBP10144 247 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 RNASE3P12724 160 aaKnown RBP6.33□□□□□ -1.4
RFFL-203ENST00000413582 TIRAPP58753 221 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 LYZL1Q6UWQ5 148 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 PGLYRP4Q96LB8 373 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 C9orf85Q96MD7 179 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
RFFL-203ENST00000413582 LOC100131303A0A0U1RQF7 123 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 A0A1B0GXF2 115 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 ZNF561-AS1K7EIQ3 104 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 MT-ND6P03923 174 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 HBBP68871 147 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 ZFP82Q8N141 532 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 GATD1Q8NB37 220 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 GNB1LQ9BYB4 327 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 PHLDA3Q9Y5J5 127 aa6.32□□□□□ -1.4
RFFL-203ENST00000413582 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
RFFL-203ENST00000413582 TGIF2-C20orf24A0A0A6YYL0 155 aa6.31□□□□□ -1.4
RFFL-203ENST00000413582 RAB5AP20339 215 aa6.31□□□□□ -1.4
RFFL-203ENST00000413582 NTF3P20783 257 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms