RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 NDUFA11Q86Y39 141 aa13.24□□□□□ -0.29
NRXN1-209ENST00000405581 ODF3Q96PU9 254 aa13.24□□□□□ -0.29
NRXN1-209ENST00000405581 C2orf16Q68DN1 1984 aa13.24□□□□□ -0.29
NRXN1-209ENST00000405581 MAP6D1Q9H9H5 199 aa13.23□□□□□ -0.29
NRXN1-209ENST00000405581 PDE6GP18545 87 aa13.23□□□□□ -0.29
NRXN1-209ENST00000405581 LMO4P61968 165 aa13.23□□□□□ -0.29
NRXN1-209ENST00000405581 WNK1Q9H4A3 2382 aa13.23□□□□□ -0.29
NRXN1-209ENST00000405581 FSTL3O95633 263 aa13.23□□□□□ -0.29
NRXN1-209ENST00000405581 CSPG4Q6UVK1 2322 aa13.22□□□□□ -0.29
NRXN1-209ENST00000405581 NCKAP5O14513 1909 aa13.22□□□□□ -0.29
NRXN1-209ENST00000405581 IGHV1-58A0A0C4DH39 117 aa13.22□□□□□ -0.29
NRXN1-209ENST00000405581 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
NRXN1-209ENST00000405581 CHKB-CPT1BH3BT56 60 aa13.22□□□□□ -0.29
NRXN1-209ENST00000405581 LINC00574Q9H8X3 128 aa13.22□□□□□ -0.29
NRXN1-209ENST00000405581 UNQ9165/PRO28630Q6UXU0 137 aa13.22□□□□□ -0.29
NRXN1-209ENST00000405581 ODF3BA8MYP8 253 aa13.21□□□□□ -0.29
NRXN1-209ENST00000405581 TEN1Q86WV5 123 aa13.21□□□□□ -0.3
NRXN1-209ENST00000405581 IGHV4-28A0A0C4DH34 117 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 MSMPQ1L6U9 139 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 H3BT86 120 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 LGALS9O00182 355 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 RS1O15537 224 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 LINC00173Q6ZV60 143 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 ATOX1O00244 68 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 KMT2EQ8IZD2 1858 aa13.2□□□□□ -0.3
NRXN1-209ENST00000405581 IGLV2-14P01704 120 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 IGF1P05019 195 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 E7EUB6 86 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 HIGD2BQ4VC39 106 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 C19orf71A6NCJ1 209 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 LECT2O14960 151 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 PRORYQ9H606 182 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 MDFICQ9P1T7 246 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 MIR7-3HGQ8N6C7 128 aa13.19□□□□□ -0.3
NRXN1-209ENST00000405581 NCR3O14931 201 aa13.18□□□□□ -0.3
NRXN1-209ENST00000405581 LYRM9A8MSI8 78 aa13.18□□□□□ -0.3
NRXN1-209ENST00000405581 DEFB4AO15263 64 aa13.18□□□□□ -0.3
NRXN1-209ENST00000405581 SMIM20Q8N5G0 67 aa13.18□□□□□ -0.3
NRXN1-209ENST00000405581 PSMB8P28062 276 aa13.18□□□□□ -0.3
NRXN1-209ENST00000405581 TMEM256-PLSCR3K7ERE1 68 aa13.17□□□□□ -0.3
NRXN1-209ENST00000405581 UFSP1Q6NVU6 142 aa13.17□□□□□ -0.3
NRXN1-209ENST00000405581 B9D2Q9BPU9 175 aa13.17□□□□□ -0.3
NRXN1-209ENST00000405581 TRBV12-3P01733 135 aa13.17□□□□□ -0.3
NRXN1-209ENST00000405581 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
NRXN1-209ENST00000405581 OTOGLQ3ZCN5 2332 aa13.16□□□□□ -0.3
NRXN1-209ENST00000405581 Q6YL49 198 aa13.16□□□□□ -0.3
NRXN1-209ENST00000405581 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
NRXN1-209ENST00000405581 ODF1Q14990 250 aa13.16□□□□□ -0.3
NRXN1-209ENST00000405581 TRBV10-2A0A0K0K1G8 114 aa13.15□□□□□ -0.3
NRXN1-209ENST00000405581 DAND5Q8N907 189 aa13.15□□□□□ -0.3
NRXN1-209ENST00000405581 NUPR1O60356 82 aa13.15□□□□□ -0.3
NRXN1-209ENST00000405581 COX7BP24311 80 aa13.15□□□□□ -0.3
NRXN1-209ENST00000405581 FXYD2P54710 66 aa13.15□□□□□ -0.3
NRXN1-209ENST00000405581 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
NRXN1-209ENST00000405581 P0C879 139 aa13.14□□□□□ -0.31
NRXN1-209ENST00000405581 IGKV1D-37A0A075B6S9 117 aa13.14□□□□□ -0.31
NRXN1-209ENST00000405581 DEFB1P60022 68 aa13.14□□□□□ -0.31
NRXN1-209ENST00000405581 K7EQG2 157 aa13.14□□□□□ -0.31
NRXN1-209ENST00000405581 MYO18BQ8IUG5 2567 aa13.13□□□□□ -0.31
NRXN1-209ENST00000405581 H7C423 109 aa13.13□□□□□ -0.31
NRXN1-209ENST00000405581 IGHV4-31P0DP07 118 aa13.13□□□□□ -0.31
NRXN1-209ENST00000405581 HILS1P60008 231 aa13.12□□□□□ -0.31
NRXN1-209ENST00000405581 PLA2G5P39877 138 aa13.12□□□□□ -0.31
NRXN1-209ENST00000405581 PTPN13Q12923 2485 aa13.12□□□□□ -0.31
NRXN1-209ENST00000405581 WFDC9Q8NEX5 89 aa13.11□□□□□ -0.31
NRXN1-209ENST00000405581 IGKV3D-7A0A0C4DH55 119 aa13.11□□□□□ -0.31
NRXN1-209ENST00000405581 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
NRXN1-209ENST00000405581 C11orf1Q9H5F2 150 aa13.11□□□□□ -0.31
NRXN1-209ENST00000405581 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
NRXN1-209ENST00000405581 ZFAND2AQ8N6M9 145 aa13.11□□□□□ -0.31
NRXN1-209ENST00000405581 KIR2DL5BQ8NHK3 375 aa13.11□□□□□ -0.31
NRXN1-209ENST00000405581 Q6ZUT4 128 aa13.1□□□□□ -0.31
NRXN1-209ENST00000405581 SPATA12Q7Z6I5 190 aa13.1□□□□□ -0.31
NRXN1-209ENST00000405581 SORL1Q92673 2214 aa13.1□□□□□ -0.31
NRXN1-209ENST00000405581 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
NRXN1-209ENST00000405581 SPATA25Q9BR10 227 aa13.1□□□□□ -0.31
NRXN1-209ENST00000405581 EBI3Q14213 229 aa13.1□□□□□ -0.31
NRXN1-209ENST00000405581 REG3AQ06141 175 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 MIAQ16674 131 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 C5orf47Q569G3 176 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 COL4A3Q01955 1670 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 FAM222AQ5U5X8 452 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 Q6ZTI0 123 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 RNF183Q96D59 192 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 TTTY13Q9BZ97 58 aa13.09□□□□□ -0.31
NRXN1-209ENST00000405581 TNRC6AQ8NDV7 1962 aaKnown RBP13.09□□□□□ -0.31
NRXN1-209ENST00000405581 PROP1O75360 226 aa13.08□□□□□ -0.31
NRXN1-209ENST00000405581 A0A1B0GXF2 115 aa13.08□□□□□ -0.32
NRXN1-209ENST00000405581 WISP2O76076 250 aa13.08□□□□□ -0.32
NRXN1-209ENST00000405581 IGLC6P0CF74 106 aa13.07□□□□□ -0.32
NRXN1-209ENST00000405581 MIFP14174 115 aa13.07□□□□□ -0.32
NRXN1-209ENST00000405581 C19orf84I3L1E1 186 aa13.07□□□□□ -0.32
NRXN1-209ENST00000405581 C14orf132Q9NPU4 83 aa13.06□□□□□ -0.32
NRXN1-209ENST00000405581 ADAMTS9Q9P2N4 1935 aa13.06□□□□□ -0.32
NRXN1-209ENST00000405581 HIST2H2BDQ6DRA6 164 aa13.06□□□□□ -0.32
NRXN1-209ENST00000405581 LINC00269Q8N2A0 174 aa13.06□□□□□ -0.32
NRXN1-209ENST00000405581 OBSL1O75147 1896 aa13.06□□□□□ -0.32
NRXN1-209ENST00000405581 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
NRXN1-209ENST00000405581 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms