RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 EDN2P20800 178 aa12.41□□□□□ -0.42
PCDHA1-201ENST00000378133 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
PCDHA1-201ENST00000378133 TMEM141Q96I45 108 aa12.41□□□□□ -0.42
PCDHA1-201ENST00000378133 MED14OSP0DP75 135 aa12.4□□□□□ -0.42
PCDHA1-201ENST00000378133 LGALS3P17931 250 aaKnown RBP12.4□□□□□ -0.42
PCDHA1-201ENST00000378133 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
PCDHA1-201ENST00000378133 PIMREGQ9BSJ6 248 aa12.4□□□□□ -0.42
PCDHA1-201ENST00000378133 A4D1N5 150 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 H7C2G1 150 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 NDUFV3P56181 108 aaKnown RBP12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 CELSR2Q9HCU4 2923 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 A6NDX4 124 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 AMELXQ99217 191 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 A0A087WW49 117 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 VCYO14598 125 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 APRG1Q8IVJ8 170 aa12.39□□□□□ -0.43
PCDHA1-201ENST00000378133 H3BUA1 57 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 LINC00315P59091 139 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 POM121L12Q8N7R1 296 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 JPT2Q9H910 190 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 ZFYVE26Q68DK2 2539 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 GAGE2BQ13066 116 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 GAGE2EQ4V326 116 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 DAZ1Q9NQZ3 744 aaKnown RBP12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 GAGE2DQ9UEU5 116 aa12.38□□□□□ -0.43
PCDHA1-201ENST00000378133 F5H697 171 aa12.37□□□□□ -0.43
PCDHA1-201ENST00000378133 SNCGO76070 127 aa12.37□□□□□ -0.43
PCDHA1-201ENST00000378133 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
PCDHA1-201ENST00000378133 RHODO00212 210 aa12.37□□□□□ -0.43
PCDHA1-201ENST00000378133 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
PCDHA1-201ENST00000378133 TRAV2A0A0B4J234 112 aa12.36□□□□□ -0.43
PCDHA1-201ENST00000378133 SUMO4Q6EEV6 95 aa12.36□□□□□ -0.43
PCDHA1-201ENST00000378133 EIF4EBP3O60516 100 aaPredicted RBP12.36□□□□□ -0.43
PCDHA1-201ENST00000378133 ZNF843Q8N446 348 aa12.36□□□□□ -0.43
PCDHA1-201ENST00000378133 TMEM263Q8WUH6 116 aaKnown RBP12.36□□□□□ -0.43
PCDHA1-201ENST00000378133 CCL19Q99731 98 aa12.36□□□□□ -0.43
PCDHA1-201ENST00000378133 IGHV4-30-2A0A087WSY4 118 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 A0A087WWL8 130 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 IGLV1-40P01703 118 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 FAM159AQ6UWV7 190 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 NTN5Q8WTR8 489 aaPredicted RBP12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 TRAV4A0A0B4J268 109 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 Q8N1Y9 231 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 SORL1Q92673 2214 aa12.35□□□□□ -0.43
PCDHA1-201ENST00000378133 KLLNB2CW77 178 aa12.34□□□□□ -0.43
PCDHA1-201ENST00000378133 Q1RN00 199 aa12.34□□□□□ -0.43
PCDHA1-201ENST00000378133 MUSTN1Q8IVN3 82 aa12.34□□□□□ -0.43
PCDHA1-201ENST00000378133 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
PCDHA1-201ENST00000378133 CRLF1O75462 422 aa12.34□□□□□ -0.43
PCDHA1-201ENST00000378133 NXPH4O95158 308 aa12.34□□□□□ -0.43
PCDHA1-201ENST00000378133 P0DMU3 169 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 DOPEY2Q9Y3R5 2298 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 A0A0B4J2C4 111 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 LEPROTO15243 131 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 AVPP01185 164 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 ATXN8Q156A1 80 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 TTC32Q5I0X7 151 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 C3orf56Q8N813 242 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 EPG5Q9HCE0 2579 aa12.33□□□□□ -0.44
PCDHA1-201ENST00000378133 IGHV3-64A0A075B6Q5 118 aa12.32□□□□□ -0.44
PCDHA1-201ENST00000378133 DCANP1Q8TF63 244 aa12.32□□□□□ -0.44
PCDHA1-201ENST00000378133 ZNF256Q9Y2P7 627 aaPredicted RBP12.32□□□□□ -0.44
PCDHA1-201ENST00000378133 MSMBP08118 114 aa12.32□□□□□ -0.44
PCDHA1-201ENST00000378133 ELANEP08246 267 aa12.32□□□□□ -0.44
PCDHA1-201ENST00000378133 TMEM223A0PJW6 202 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 FLNCQ14315 2725 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 TRBV27A0A0K0K1C4 114 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 IGKV3-20P01619 116 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 BEX4Q9NWD9 120 aaPredicted RBP12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 TEX49A0A1B0GTD5 131 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 IFITM1P13164 125 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 CFHR3Q02985 330 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 SPXQ9BT56 116 aa12.31□□□□□ -0.44
PCDHA1-201ENST00000378133 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
PCDHA1-201ENST00000378133 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
PCDHA1-201ENST00000378133 C10orf99Q6UWK7 81 aa12.3□□□□□ -0.44
PCDHA1-201ENST00000378133 K7EMT4 169 aa12.3□□□□□ -0.44
PCDHA1-201ENST00000378133 CSMD2Q7Z408 3487 aa12.29□□□□□ -0.44
PCDHA1-201ENST00000378133 TRAV12-2A0A075B6T6 113 aa12.29□□□□□ -0.44
PCDHA1-201ENST00000378133 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
PCDHA1-201ENST00000378133 ZNF462Q96JM2 2506 aa12.28□□□□□ -0.44
PCDHA1-201ENST00000378133 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
PCDHA1-201ENST00000378133 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
PCDHA1-201ENST00000378133 TRBV6-5A0A0K0K1A5 114 aa12.27□□□□□ -0.44
PCDHA1-201ENST00000378133 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.44
PCDHA1-201ENST00000378133 LGALS9O00182 355 aa12.27□□□□□ -0.44
PCDHA1-201ENST00000378133 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.44
PCDHA1-201ENST00000378133 USP9XQ93008 2570 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms