RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 FAM223BA6NKX1 122 aa9.32□□□□□ -0.92
CTNNB1-201ENST00000349496 C10orf55Q5SWW7 151 aa9.32□□□□□ -0.92
CTNNB1-201ENST00000349496 CD164Q04900 197 aa9.32□□□□□ -0.92
CTNNB1-201ENST00000349496 FAM90A1Q86YD7 464 aa9.32□□□□□ -0.92
CTNNB1-201ENST00000349496 SNURFQ9Y675 71 aa9.32□□□□□ -0.92
CTNNB1-201ENST00000349496 K7ENP7 123 aa9.32□□□□□ -0.92
CTNNB1-201ENST00000349496 EGR2P11161 476 aaPredicted RBP9.32□□□□□ -0.92
CTNNB1-201ENST00000349496 CRIP1P50238 77 aa9.31□□□□□ -0.92
CTNNB1-201ENST00000349496 ZFHX3Q15911 3703 aa9.31□□□□□ -0.92
CTNNB1-201ENST00000349496 PAX8Q06710 450 aa9.31□□□□□ -0.92
CTNNB1-201ENST00000349496 C1orf229Q6ZS94 237 aaPredicted RBP9.31□□□□□ -0.92
CTNNB1-201ENST00000349496 C5orf38Q86SI9 138 aa9.31□□□□□ -0.92
CTNNB1-201ENST00000349496 SPG11Q96JI7 2443 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 M0R1B8 84 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 SMIM2Q9BVW6 85 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 M0R381 172 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 NRACQ8N912 160 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 I3L3M4 83 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 LST1O00453 97 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 PAX4O43316 350 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 C11orf68Q9H3H3 251 aaKnown RBP9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 PTPRQQ9UMZ3 2332 aa9.3□□□□□ -0.92
CTNNB1-201ENST00000349496 PRB1P04280 392 aa9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 XCL1P47992 114 aa9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 XCL2Q9UBD3 114 aa9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 F5H697 171 aa9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 SS18L1O75177 396 aaPredicted RBP9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 SAA1P0DJI8 122 aaPredicted RBP9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 TRAV21A0A0B4J279 112 aa9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 LY6LH3BQJ8 138 aa9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 Q6ZSV7 163 aa9.29□□□□□ -0.92
CTNNB1-201ENST00000349496 PROP1O75360 226 aa9.28□□□□□ -0.92
CTNNB1-201ENST00000349496 RNF185Q96GF1 192 aa9.28□□□□□ -0.92
CTNNB1-201ENST00000349496 TRGV3P03979 118 aa9.28□□□□□ -0.92
CTNNB1-201ENST00000349496 SAA2P0DJI9 122 aaPredicted RBP9.28□□□□□ -0.92
CTNNB1-201ENST00000349496 VPS13CQ709C8 3753 aa9.27□□□□□ -0.92
CTNNB1-201ENST00000349496 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 GP9P14770 177 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 PSMB8P28062 276 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 SUMO2P61956 95 aaKnown RBP9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 FAM19A1Q7Z5A9 133 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 TRBV7-6A0A0J9YX20 115 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 F8WEM9 126 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 LY6G5BQ8NDX9 201 aa9.27□□□□□ -0.93
CTNNB1-201ENST00000349496 DSCAMO60469 2012 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 IGKV1-16P04430 117 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 WFDC9Q8NEX5 89 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 SLC25A15Q9Y619 301 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 IGHV1-18A0A0C4DH31 117 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 NXPH4O95158 308 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 ZNF71Q9NQZ8 489 aaPredicted RBP9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 SEM1Q6ZVN7 128 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 C14orf132Q9NPU4 83 aa9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 MRPL36Q9P0J6 103 aaKnown RBP9.26□□□□□ -0.93
CTNNB1-201ENST00000349496 HOXD3P31249 432 aaPredicted RBP9.25□□□□□ -0.93
CTNNB1-201ENST00000349496 IGFL4Q6B9Z1 124 aa9.25□□□□□ -0.93
CTNNB1-201ENST00000349496 GFRALQ6UXV0 394 aa9.25□□□□□ -0.93
CTNNB1-201ENST00000349496 FAM216BQ8N7L0 139 aa9.25□□□□□ -0.93
CTNNB1-201ENST00000349496 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
CTNNB1-201ENST00000349496 EIF4EBP1Q13541 118 aaPredicted RBP9.25□□□□□ -0.93
CTNNB1-201ENST00000349496 IGKV1D-17A0A075B6S4 117 aa9.25□□□□□ -0.93
CTNNB1-201ENST00000349496 COL27A1Q8IZC6 1860 aaPredicted RBP9.24□□□□□ -0.93
CTNNB1-201ENST00000349496 MALRD1Q5VYJ5 2156 aa9.24□□□□□ -0.93
CTNNB1-201ENST00000349496 AVPP01185 164 aa9.24□□□□□ -0.93
CTNNB1-201ENST00000349496 COX6B1P14854 86 aa9.24□□□□□ -0.93
CTNNB1-201ENST00000349496 SAA4P35542 130 aa9.24□□□□□ -0.93
CTNNB1-201ENST00000349496 CENPEQ02224 2701 aa9.24□□□□□ -0.93
CTNNB1-201ENST00000349496 CCL13Q99616 98 aa9.24□□□□□ -0.93
CTNNB1-201ENST00000349496 HILS1P60008 231 aa9.23□□□□□ -0.93
CTNNB1-201ENST00000349496 APRG1Q8IVJ8 170 aa9.23□□□□□ -0.93
CTNNB1-201ENST00000349496 Q9HAA7 133 aa9.23□□□□□ -0.93
CTNNB1-201ENST00000349496 ANKHD1Q8IWZ3 2542 aaKnown RBP9.23□□□□□ -0.93
CTNNB1-201ENST00000349496 TOMM6Q96B49 74 aa9.23□□□□□ -0.93
CTNNB1-201ENST00000349496 UPK3BQ9BT76 320 aa9.23□□□□□ -0.93
CTNNB1-201ENST00000349496 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
CTNNB1-201ENST00000349496 CSMD2Q7Z408 3487 aa9.22□□□□□ -0.93
CTNNB1-201ENST00000349496 CCKP06307 115 aa9.22□□□□□ -0.93
CTNNB1-201ENST00000349496 FP248Q71RG6 208 aaPredicted RBP9.22□□□□□ -0.93
CTNNB1-201ENST00000349496 TMEM190Q8WZ59 177 aa9.22□□□□□ -0.93
CTNNB1-201ENST00000349496 DAND5Q8N907 189 aa9.22□□□□□ -0.93
CTNNB1-201ENST00000349496 BUB3O43684 328 aa9.21□□□□□ -0.93
CTNNB1-201ENST00000349496 SOCS3O14543 225 aa9.21□□□□□ -0.94
CTNNB1-201ENST00000349496 RPL39LQ96EH5 51 aaKnown RBP9.21□□□□□ -0.94
CTNNB1-201ENST00000349496 S4R3C0 116 aa9.21□□□□□ -0.94
CTNNB1-201ENST00000349496 WT1-ASQ06250 92 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 DEFB121Q5J5C9 76 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 PRRC2AP48634 2157 aaKnown RBP9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 IGHV3-72A0A0B4J1Y9 119 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 RPL27AP46776 148 aaKnown RBP9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 RUSC1-AS1Q66K80 236 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 RMI2Q96E14 147 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 CXXC4Q9H2H0 198 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 PHLDA3Q9Y5J5 127 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 IGKV1D-37A0A075B6S9 117 aa9.2□□□□□ -0.94
CTNNB1-201ENST00000349496 A0A087WZ39 114 aa9.19□□□□□ -0.94
CTNNB1-201ENST00000349496 IGKV3-15P01624 115 aa9.19□□□□□ -0.94
CTNNB1-201ENST00000349496 CCL3L1P16619 93 aa9.19□□□□□ -0.94
CTNNB1-201ENST00000349496 MRPS36P82909 103 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms