RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 SPATA12Q7Z6I5 190 aa12.6□□□□□ -0.39
CDC42BPG-201ENST00000342711 CHD3Q12873 2000 aaKnown RBP12.59□□□□□ -0.39
CDC42BPG-201ENST00000342711 PLA2G5P39877 138 aa12.59□□□□□ -0.39
CDC42BPG-201ENST00000342711 C4orf3Q8WVX3 66 aa12.59□□□□□ -0.39
CDC42BPG-201ENST00000342711 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
CDC42BPG-201ENST00000342711 Q6ZUT4 128 aa12.59□□□□□ -0.39
CDC42BPG-201ENST00000342711 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPG-201ENST00000342711 IGKV2D-26A0A0A0MRZ7 120 aa12.58□□□□□ -0.4
CDC42BPG-201ENST00000342711 IGKV1D-37A0A075B6S9 117 aa12.58□□□□□ -0.4
CDC42BPG-201ENST00000342711 ZNF80P51504 273 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPG-201ENST00000342711 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
CDC42BPG-201ENST00000342711 PROP1O75360 226 aa12.57□□□□□ -0.4
CDC42BPG-201ENST00000342711 A0A0J9YX75 114 aa12.57□□□□□ -0.4
CDC42BPG-201ENST00000342711 MIAQ16674 131 aa12.57□□□□□ -0.4
CDC42BPG-201ENST00000342711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDC42BPG-201ENST00000342711 LINC00322Q6ZN03 302 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPG-201ENST00000342711 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 P0DMU3 169 aa12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 FAM231AP0DMU4 169 aa12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 FAM231CP0DMU5 169 aa12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 TNRC6AQ8NDV7 1962 aaKnown RBP12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 WFDC11Q8NEX6 87 aa12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 SIRPDQ9H106 197 aa12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 TP53TG3Q9ULZ0 132 aa12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 TNRC6BQ9UPQ9 1833 aaKnown RBP12.56□□□□□ -0.4
CDC42BPG-201ENST00000342711 TRAV26-1A0A087WT03 109 aa12.55□□□□□ -0.4
CDC42BPG-201ENST00000342711 MSMPQ1L6U9 139 aa12.55□□□□□ -0.4
CDC42BPG-201ENST00000342711 TMEM263Q8WUH6 116 aaKnown RBP12.55□□□□□ -0.4
CDC42BPG-201ENST00000342711 GTF3C1Q12789 2109 aa12.55□□□□□ -0.4
CDC42BPG-201ENST00000342711 IGLV2-8P01709 118 aa12.55□□□□□ -0.4
CDC42BPG-201ENST00000342711 GDF5OSQ5U4N7 250 aa12.55□□□□□ -0.4
CDC42BPG-201ENST00000342711 COX7BP24311 80 aa12.54□□□□□ -0.4
CDC42BPG-201ENST00000342711 MED13Q9UHV7 2174 aa12.54□□□□□ -0.4
CDC42BPG-201ENST00000342711 A0A0J9YXY3 114 aa12.54□□□□□ -0.4
CDC42BPG-201ENST00000342711 DENND4CQ5VZ89 1909 aa12.54□□□□□ -0.4
CDC42BPG-201ENST00000342711 TMEM89A2RUT3 159 aa12.54□□□□□ -0.4
CDC42BPG-201ENST00000342711 H0Y9J4 135 aa12.54□□□□□ -0.4
CDC42BPG-201ENST00000342711 MYCNOSP40205 109 aa12.54□□□□□ -0.4
CDC42BPG-201ENST00000342711 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
CDC42BPG-201ENST00000342711 LINC00643Q86TS7 51 aa12.53□□□□□ -0.4
CDC42BPG-201ENST00000342711 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
CDC42BPG-201ENST00000342711 MAP6D1Q9H9H5 199 aa12.53□□□□□ -0.4
CDC42BPG-201ENST00000342711 CCDC140Q96MF4 163 aa12.52□□□□□ -0.4
CDC42BPG-201ENST00000342711 FAM110AQ9BQ89 295 aa12.52□□□□□ -0.4
CDC42BPG-201ENST00000342711 UPK3BQ9BT76 320 aa12.52□□□□□ -0.41
CDC42BPG-201ENST00000342711 TM2D2Q9BX73 214 aa12.52□□□□□ -0.41
CDC42BPG-201ENST00000342711 IGF2-ASQ6U949 168 aa12.52□□□□□ -0.41
CDC42BPG-201ENST00000342711 P0C879 139 aa12.52□□□□□ -0.41
CDC42BPG-201ENST00000342711 RNF183Q96D59 192 aa12.52□□□□□ -0.41
CDC42BPG-201ENST00000342711 PRO0255Q9UI72 69 aa12.51□□□□□ -0.41
CDC42BPG-201ENST00000342711 PCNX1Q96RV3 2341 aa12.51□□□□□ -0.41
CDC42BPG-201ENST00000342711 A6NDX4 124 aa12.51□□□□□ -0.41
CDC42BPG-201ENST00000342711 NOTCH4Q99466 2003 aa12.51□□□□□ -0.41
CDC42BPG-201ENST00000342711 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
CDC42BPG-201ENST00000342711 WISP2O76076 250 aa12.5□□□□□ -0.41
CDC42BPG-201ENST00000342711 BRK1Q8WUW1 75 aa12.5□□□□□ -0.41
CDC42BPG-201ENST00000342711 HIST2H2BDQ6DRA6 164 aa12.5□□□□□ -0.41
CDC42BPG-201ENST00000342711 DAZAP2Q15038 168 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPG-201ENST00000342711 TRBV10-1A0A0K0K1A3 114 aa12.5□□□□□ -0.41
CDC42BPG-201ENST00000342711 TEX49A0A1B0GTD5 131 aa12.49□□□□□ -0.41
CDC42BPG-201ENST00000342711 PDE6GP18545 87 aa12.49□□□□□ -0.41
CDC42BPG-201ENST00000342711 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
CDC42BPG-201ENST00000342711 MT-ATP8P03928 68 aa12.49□□□□□ -0.41
CDC42BPG-201ENST00000342711 ZFAND2AQ8N6M9 145 aa12.49□□□□□ -0.41
CDC42BPG-201ENST00000342711 LINC01548A6NM66 108 aa12.49□□□□□ -0.41
CDC42BPG-201ENST00000342711 A0A1W2PNU3 283 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPG-201ENST00000342711 C4orf48Q5BLP8 95 aa12.48□□□□□ -0.41
CDC42BPG-201ENST00000342711 SVIPQ8NHG7 77 aa12.48□□□□□ -0.41
CDC42BPG-201ENST00000342711 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
CDC42BPG-201ENST00000342711 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
CDC42BPG-201ENST00000342711 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
CDC42BPG-201ENST00000342711 Q6ZTI0 123 aa12.47□□□□□ -0.41
CDC42BPG-201ENST00000342711 NEXN-AS1Q8NBZ9 246 aa12.47□□□□□ -0.41
CDC42BPG-201ENST00000342711 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
CDC42BPG-201ENST00000342711 PLXNB3Q9ULL4 1909 aa12.47□□□□□ -0.41
CDC42BPG-201ENST00000342711 BPY2O14599 106 aa12.46□□□□□ -0.41
CDC42BPG-201ENST00000342711 NDUFV3P56181 108 aaKnown RBP12.46□□□□□ -0.41
CDC42BPG-201ENST00000342711 LINC00467Q9BRT7 94 aa12.46□□□□□ -0.41
CDC42BPG-201ENST00000342711 OBSL1O75147 1896 aa12.46□□□□□ -0.41
CDC42BPG-201ENST00000342711 Q6ZPA2 131 aa12.45□□□□□ -0.42
CDC42BPG-201ENST00000342711 SMAD5-AS1Q9Y6J3 95 aa12.45□□□□□ -0.42
CDC42BPG-201ENST00000342711 ZGRF1Q86YA3 2104 aa12.45□□□□□ -0.42
CDC42BPG-201ENST00000342711 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
CDC42BPG-201ENST00000342711 REG3AQ06141 175 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 ZNF295-AS1Q8N0V1 137 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 C1orf229Q6ZS94 237 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 ODF3BA8MYP8 253 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 SLPIP03973 132 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 IGKV4-1P06312 121 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 MED13LQ71F56 2210 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 IGF1P05019 195 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 C20orf173Q96LM9 149 aa12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 SPANXB1Q9NS25 103 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPG-201ENST00000342711 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
CDC42BPG-201ENST00000342711 CDKN2A-AS1Q9UH64 79 aa12.43□□□□□ -0.42
CDC42BPG-201ENST00000342711 ARHGAP21Q5T5U3 1957 aa12.43□□□□□ -0.42
CDC42BPG-201ENST00000342711 SPRY4Q9C004 299 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms