RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZC2HC1BQ5TFG8 222 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 SCGB1A1P11684 91 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 GDF5OSQ5U4N7 250 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 NFE4Q86UQ8 179 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 LGALS9BQ3B8N2 356 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 SIVA1O15304 175 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 GAGE10A6NGK3 116 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 K7EN84 100 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 COL5A1-AS1Q5SY13 56 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 FGF6P10767 208 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 KPRPQ5T749 579 aaPredicted RBP9.55□□□□□ -0.88
LIN54-201ENST00000340417 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 NDUFA1O15239 70 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BKO60814 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BJP06899 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BOP23527 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BBP33778 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BDP58876 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BCP62807 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST2H2BEQ16778 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BHQ93079 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BNQ99877 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BMQ99879 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 ZNF479Q96JC4 524 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 MSRB1Q9NZV6 116 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
LIN54-201ENST00000340417 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 ESDP10768 282 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
LIN54-201ENST00000340417 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
LIN54-201ENST00000340417 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 BRI3O95415 125 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
LIN54-201ENST00000340417 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
LIN54-201ENST00000340417 TAL2Q16559 108 aa9.53□□□□□ -0.88
LIN54-201ENST00000340417 C9JQL5 133 aa9.52□□□□□ -0.88
LIN54-201ENST00000340417 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.88
LIN54-201ENST00000340417 CRIP2P52943 208 aaPredicted RBP9.52□□□□□ -0.89
LIN54-201ENST00000340417 SNHG12Q9BXW3 62 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 K7EMI3 77 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 C18orf32Q8TCD1 76 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 SORL1Q92673 2214 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 A0A1B0GV72 72 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 UBE2AP49459 152 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 EXPH5Q8NEV8 1989 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 MYO9AB2RTY4 2548 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.51□□□□□ -0.89
LIN54-201ENST00000340417 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 GTSF1Q8WW33 167 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 USP9XQ93008 2570 aaPredicted RBP9.51□□□□□ -0.89
LIN54-201ENST00000340417 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ZFP2Q6ZN57 461 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ETDCA0A1B0GVM5 59 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 CCL25O15444 150 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 CTAG1AP78358 180 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 SCRT2Q9NQ03 307 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ODF3L2Q3SX64 289 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 HIGD2BQ4VC39 106 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 TRAV8-2A0A0B4J237 113 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 EDN2P20800 178 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 REG3AQ06141 175 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 BOD1L2Q8IYS8 172 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 DCANP1Q8TF63 244 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 DOPEY1Q5JWR5 2465 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
LIN54-201ENST00000340417 DNAH12Q6ZR08 3092 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 ZNF80P51504 273 aaPredicted RBP9.47□□□□□ -0.89
LIN54-201ENST00000340417 Q8N2B8 174 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 OVOL2Q9BRP0 275 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 Q9H8V8 135 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.89
LIN54-201ENST00000340417 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.89
LIN54-201ENST00000340417 F8VRH5 84 aa9.46□□□□□ -0.89
LIN54-201ENST00000340417 COLCA2A8K830 154 aa9.46□□□□□ -0.9
LIN54-201ENST00000340417 KIR3DS1Q14943 382 aa9.46□□□□□ -0.9
LIN54-201ENST00000340417 STPG4Q8N801 248 aa9.46□□□□□ -0.9
LIN54-201ENST00000340417 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 CLUHP3Q96NS8 147 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 FLNBO75369 2602 aaKnown RBP9.45□□□□□ -0.9
LIN54-201ENST00000340417 LRCOL1A6NCL2 159 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 CFAP126Q5VTH2 177 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 USP9YO00507 2555 aaPredicted RBP9.45□□□□□ -0.9
LIN54-201ENST00000340417 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 CTRLP40313 264 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 HSD52Q0P140 79 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms