RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 POLR2KP53803 58 aaKnown RBP12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 ZNF56Q15929 161 aa12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 SPINK13Q1W4C9 94 aa12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 IGSF10Q6WRI0 2623 aa12.93□□□□□ -0.34
PTP4A3-201ENST00000329397 A0A1B0GWB2 263 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 HTN1P15515 57 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 MAPK1IP1LQ8NDC0 245 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 KIR2DL4Q99706 377 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 NXPH4O95158 308 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
PTP4A3-201ENST00000329397 Q8N1Y9 231 aa12.91□□□□□ -0.34
PTP4A3-201ENST00000329397 J3QR89 54 aa12.91□□□□□ -0.34
PTP4A3-201ENST00000329397 PSMB2P49721 201 aa12.91□□□□□ -0.34
PTP4A3-201ENST00000329397 PMVKQ15126 192 aa12.91□□□□□ -0.34
PTP4A3-201ENST00000329397 ABCA12Q86UK0 2595 aa12.9□□□□□ -0.34
PTP4A3-201ENST00000329397 PRM2P04554 102 aa12.9□□□□□ -0.34
PTP4A3-201ENST00000329397 MSMBP08118 114 aa12.9□□□□□ -0.34
PTP4A3-201ENST00000329397 IGHV4OR15-8A0A075B7B6 117 aa12.9□□□□□ -0.34
PTP4A3-201ENST00000329397 A0A087WW49 117 aa12.9□□□□□ -0.34
PTP4A3-201ENST00000329397 A0A0J9YY99 117 aa12.9□□□□□ -0.34
PTP4A3-201ENST00000329397 IGHV3-73A0A0B4J1V6 119 aa12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 WNK1Q9H4A3 2382 aa12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 LRRK2Q5S007 2527 aa12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 VCYO14598 125 aa12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 SMCPP49901 116 aaPredicted RBP12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 ZNF580Q9UK33 172 aa12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 FBN2P35556 2912 aa12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 PTPN13Q12923 2485 aa12.89□□□□□ -0.35
PTP4A3-201ENST00000329397 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
PTP4A3-201ENST00000329397 H3BUA1 57 aa12.88□□□□□ -0.35
PTP4A3-201ENST00000329397 PPP1R17O96001 155 aa12.88□□□□□ -0.35
PTP4A3-201ENST00000329397 POM121L12Q8N7R1 296 aa12.88□□□□□ -0.35
PTP4A3-201ENST00000329397 MT-ATP8P03928 68 aa12.88□□□□□ -0.35
PTP4A3-201ENST00000329397 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
PTP4A3-201ENST00000329397 CFHR3Q02985 330 aa12.88□□□□□ -0.35
PTP4A3-201ENST00000329397 LINC01619G3V211 115 aa12.87□□□□□ -0.35
PTP4A3-201ENST00000329397 UBE2D1P51668 147 aa12.87□□□□□ -0.35
PTP4A3-201ENST00000329397 HIST2H2BDQ6DRA6 164 aa12.87□□□□□ -0.35
PTP4A3-201ENST00000329397 P0DMU3 169 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 FAM231AP0DMU4 169 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 FAM231CP0DMU5 169 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 SETD2Q9BYW2 2564 aaPredicted RBP12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 CCDC179H3BU77 68 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 HERVK_113P61574 105 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 DEFB112Q30KQ8 113 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 TEX15Q9BXT5 2789 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 M0QY20 66 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 PSMB8P28062 276 aa12.86□□□□□ -0.35
PTP4A3-201ENST00000329397 SONP18583 2426 aaKnown RBP12.85□□□□□ -0.35
PTP4A3-201ENST00000329397 A0A0J9YX75 114 aa12.85□□□□□ -0.35
PTP4A3-201ENST00000329397 NHLRC4P0CG21 123 aaPredicted RBP12.85□□□□□ -0.35
PTP4A3-201ENST00000329397 PROK1P58294 105 aa12.85□□□□□ -0.35
PTP4A3-201ENST00000329397 ZNF876PQ49A33 203 aa12.85□□□□□ -0.35
PTP4A3-201ENST00000329397 NFE4Q86UQ8 179 aa12.85□□□□□ -0.35
PTP4A3-201ENST00000329397 NDUFA11Q86Y39 141 aa12.85□□□□□ -0.35
PTP4A3-201ENST00000329397 TRBV27A0A0K0K1C4 114 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 H7C2G1 150 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 LGALS9O00182 355 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 RNASE13Q5GAN3 156 aaKnown RBP12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 DLX4Q92988 240 aaPredicted RBP12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 C9orf85Q96MD7 179 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 C2CD3Q4AC94 2353 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 CFC1BP0CG36 223 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 CFC1P0CG37 223 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 CFAP126Q5VTH2 177 aa12.84□□□□□ -0.35
PTP4A3-201ENST00000329397 ADARB2-AS1A8MUL3 147 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 J3QQQ9 107 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 AMELXQ99217 191 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 Q9UF83 564 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 F8WDY8 70 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 CEMP1Q6PRD7 247 aaPredicted RBP12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 TIMM17AQ99595 171 aa12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 PRRC2AP48634 2157 aaKnown RBP12.83□□□□□ -0.36
PTP4A3-201ENST00000329397 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 TCL1BO95988 128 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 K7EMT4 169 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 GAGE7O76087 117 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 GAGE12FP0CL80 117 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 GAGE12GP0CL81 117 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 GAGE12IP0CL82 117 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 SNRPD3P62318 126 aaKnown RBP12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 GAGE4Q13068 117 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 RBMY1FQ15415 496 aaKnown RBP12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 TMEM141Q96I45 108 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 EPG5Q9HCE0 2579 aa12.82□□□□□ -0.36
PTP4A3-201ENST00000329397 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
PTP4A3-201ENST00000329397 A0A0J9YXV3 536 aa12.81□□□□□ -0.36
PTP4A3-201ENST00000329397 LGALS3P17931 250 aaKnown RBP12.81□□□□□ -0.36
PTP4A3-201ENST00000329397 DEFB136Q30KP8 78 aa12.81□□□□□ -0.36
PTP4A3-201ENST00000329397 PRORYQ9H606 182 aa12.81□□□□□ -0.36
PTP4A3-201ENST00000329397 CHD6Q8TD26 2715 aa12.81□□□□□ -0.36
PTP4A3-201ENST00000329397 TRAV2A0A0B4J234 112 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms