RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 JMJD1CQ15652 2540 aa16.29■□□□□ 0.2
TPM4-201ENST00000300933 A0A1W2PRX2 142 aa16.29■□□□□ 0.2
TPM4-201ENST00000300933 LOC107984156A0A0G2JMH3 177 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 A0A0J9YX75 114 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 F8VRH5 84 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 H7C1H1 209 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 ARL17AQ8IVW1 177 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 HTN1P15515 57 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 FOXI1Q12951 378 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 APRG1Q8IVJ8 170 aa16.28■□□□□ 0.2
TPM4-201ENST00000300933 ZNF418Q8TF45 676 aaPredicted RBP16.28■□□□□ 0.2
TPM4-201ENST00000300933 KNCNA6PVL3 124 aa16.27■□□□□ 0.2
TPM4-201ENST00000300933 SCGB3A1Q96QR1 104 aa16.27■□□□□ 0.2
TPM4-201ENST00000300933 ESM1Q9NQ30 184 aa16.27■□□□□ 0.2
TPM4-201ENST00000300933 A0A087WWL8 130 aa16.27■□□□□ 0.19
TPM4-201ENST00000300933 PRM2P04554 102 aa16.27■□□□□ 0.19
TPM4-201ENST00000300933 PLA2G2AP14555 144 aa16.27■□□□□ 0.19
TPM4-201ENST00000300933 PSMB2P49721 201 aa16.27■□□□□ 0.19
TPM4-201ENST00000300933 PTH2Q96A98 100 aa16.27■□□□□ 0.19
TPM4-201ENST00000300933 MDFICQ9P1T7 246 aa16.27■□□□□ 0.19
TPM4-201ENST00000300933 LINC01549A6NIU2 74 aa16.26■□□□□ 0.19
TPM4-201ENST00000300933 SMCPP49901 116 aaPredicted RBP16.26■□□□□ 0.19
TPM4-201ENST00000300933 NFE4Q86UQ8 179 aa16.26■□□□□ 0.19
TPM4-201ENST00000300933 ZFP2Q6ZN57 461 aa16.26■□□□□ 0.19
TPM4-201ENST00000300933 Q6ZSV7 163 aa16.26■□□□□ 0.19
TPM4-201ENST00000300933 KLHL30-AS1Q8NEE0 82 aa16.26■□□□□ 0.19
TPM4-201ENST00000300933 GEMIN7Q9H840 131 aaKnown RBP16.26■□□□□ 0.19
TPM4-201ENST00000300933 DNAJC9-AS1A6NH13 148 aa16.25■□□□□ 0.19
TPM4-201ENST00000300933 RASL10AQ92737 203 aa16.25■□□□□ 0.19
TPM4-201ENST00000300933 DLX4Q92988 240 aaPredicted RBP16.25■□□□□ 0.19
TPM4-201ENST00000300933 LGALS9O00182 355 aa16.25■□□□□ 0.19
TPM4-201ENST00000300933 SCGB1D4Q6XE38 83 aa16.25■□□□□ 0.19
TPM4-201ENST00000300933 MRAP2Q96G30 205 aa16.25■□□□□ 0.19
TPM4-201ENST00000300933 C1QTNF4Q9BXJ3 329 aa16.24■□□□□ 0.19
TPM4-201ENST00000300933 SPINK8P0C7L1 97 aa16.24■□□□□ 0.19
TPM4-201ENST00000300933 CRYBA4P53673 196 aa16.24■□□□□ 0.19
TPM4-201ENST00000300933 CFAP126Q5VTH2 177 aa16.24■□□□□ 0.19
TPM4-201ENST00000300933 RNF152Q8N8N0 203 aa16.24■□□□□ 0.19
TPM4-201ENST00000300933 DPH3P1Q9H4G8 78 aa16.24■□□□□ 0.19
TPM4-201ENST00000300933 SRSF9Q13242 221 aaKnown RBP eCLIP16.23■□□□□ 0.19
TPM4-201ENST00000300933 PLEKHB2Q96CS7 222 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 PRADC1Q9BSG0 188 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 SMIM2Q9BVW6 85 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 CDIP1Q9H305 208 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 ZNF815PA8K554 130 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 MT-ATP8P03928 68 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 DEFB131AP59861 70 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 FHL3Q13643 280 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 Q8N2B8 174 aa16.23■□□□□ 0.19
TPM4-201ENST00000300933 J3QKU1 62 aa16.22■□□□□ 0.19
TPM4-201ENST00000300933 TMEM61Q8N0U2 210 aa16.22■□□□□ 0.19
TPM4-201ENST00000300933 LINC01619G3V211 115 aa16.22■□□□□ 0.19
TPM4-201ENST00000300933 FAM74A4Q5TZK3 123 aa16.22■□□□□ 0.19
TPM4-201ENST00000300933 Q8N1Y9 231 aa16.22■□□□□ 0.19
TPM4-201ENST00000300933 YAE1D1Q9NRH1 226 aa16.22■□□□□ 0.19
TPM4-201ENST00000300933 ANK3Q12955 4377 aaKnown RBP16.21■□□□□ 0.19
TPM4-201ENST00000300933 PRSS47A8MTI9 375 aa16.21■□□□□ 0.18
TPM4-201ENST00000300933 SETXQ7Z333 2677 aaKnown RBP16.2■□□□□ 0.18
TPM4-201ENST00000300933 TRAV12-1A0A0B4J245 112 aa16.2■□□□□ 0.18
TPM4-201ENST00000300933 TRBV7-9A0A0J9YWB2 115 aa16.2■□□□□ 0.18
TPM4-201ENST00000300933 NEXN-AS1Q8NBZ9 246 aa16.2■□□□□ 0.18
TPM4-201ENST00000300933 TSPAN13O95857 204 aa16.2■□□□□ 0.18
TPM4-201ENST00000300933 F5H697 171 aa16.19■□□□□ 0.18
TPM4-201ENST00000300933 EMP1P54849 157 aa16.19■□□□□ 0.18
TPM4-201ENST00000300933 SUMO2P61956 95 aaKnown RBP16.19■□□□□ 0.18
TPM4-201ENST00000300933 PRSS29PA6NIE9 313 aa16.19■□□□□ 0.18
TPM4-201ENST00000300933 XGP55808 180 aa16.18■□□□□ 0.18
TPM4-201ENST00000300933 KRTAP1-1Q07627 177 aa16.18■□□□□ 0.18
TPM4-201ENST00000300933 BAALCQ8WXS3 180 aa16.18■□□□□ 0.18
TPM4-201ENST00000300933 SMR3AQ99954 134 aa16.18■□□□□ 0.18
TPM4-201ENST00000300933 RBMY1A1P0DJD3 496 aaKnown RBP16.18■□□□□ 0.18
TPM4-201ENST00000300933 RBMY1CP0DJD4 496 aa16.18■□□□□ 0.18
TPM4-201ENST00000300933 RBMY1FQ15415 496 aaKnown RBP16.18■□□□□ 0.18
TPM4-201ENST00000300933 TOMM6Q96B49 74 aa16.18■□□□□ 0.18
TPM4-201ENST00000300933 HIVEP2P31629 2446 aa16.17■□□□□ 0.18
TPM4-201ENST00000300933 LINC00315P59091 139 aa16.17■□□□□ 0.18
TPM4-201ENST00000300933 ORMDL2Q53FV1 153 aa16.17■□□□□ 0.18
TPM4-201ENST00000300933 C2orf66Q6UXQ4 117 aa16.17■□□□□ 0.18
TPM4-201ENST00000300933 C4orf3Q8WVX3 66 aa16.17■□□□□ 0.18
TPM4-201ENST00000300933 IGHV3-16A0A0C4DH30 117 aa16.16■□□□□ 0.18
TPM4-201ENST00000300933 TMEM238LA0A1B0GVL6 79 aa16.16■□□□□ 0.18
TPM4-201ENST00000300933 A6NJY4 79 aa16.16■□□□□ 0.18
TPM4-201ENST00000300933 KIF25-AS1Q9Y6Z4 181 aa16.16■□□□□ 0.18
TPM4-201ENST00000300933 CD28P10747 220 aa16.16■□□□□ 0.18
TPM4-201ENST00000300933 Q6ZUT4 128 aa16.15■□□□□ 0.18
TPM4-201ENST00000300933 DYNLRB2Q8TF09 96 aa16.14■□□□□ 0.17
TPM4-201ENST00000300933 CARD19Q96LW7 228 aa16.14■□□□□ 0.17
TPM4-201ENST00000300933 IGHV1OR15-1A0A075B7D0 117 aa16.14■□□□□ 0.17
TPM4-201ENST00000300933 RAX2Q96IS3 184 aa16.14■□□□□ 0.17
TPM4-201ENST00000300933 RBMY1BA6NDE4 496 aaKnown RBP16.13■□□□□ 0.17
TPM4-201ENST00000300933 RBMY1EA6NEQ0 496 aaKnown RBP16.13■□□□□ 0.17
TPM4-201ENST00000300933 RBMY1DP0C7P1 496 aaKnown RBP16.13■□□□□ 0.17
TPM4-201ENST00000300933 MED14OSP0DP75 135 aa16.13■□□□□ 0.17
TPM4-201ENST00000300933 SUMO4Q6EEV6 95 aa16.13■□□□□ 0.17
TPM4-201ENST00000300933 ATP6V0E2Q8NHE4 81 aa16.13■□□□□ 0.17
TPM4-201ENST00000300933 UBE2D1P51668 147 aa16.13■□□□□ 0.17
TPM4-201ENST00000300933 SVIPQ8NHG7 77 aa16.13■□□□□ 0.17
TPM4-201ENST00000300933 FN1P02751 2386 aaKnown RBP16.13■□□□□ 0.17
TPM4-201ENST00000300933 TCL1BO95988 128 aa16.12■□□□□ 0.17
TPM4-201ENST00000300933 KIR2DL4Q99706 377 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms