RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 C11orf86A6NJI1 115 aa14.54□□□□□ -0.08
NFIL3-201ENST00000297689 FABP2P12104 132 aa14.54□□□□□ -0.08
NFIL3-201ENST00000297689 FAM74A4Q5TZK3 123 aa14.54□□□□□ -0.08
NFIL3-201ENST00000297689 PAPPA-AS1Q5QFB9 102 aa14.54□□□□□ -0.08
NFIL3-201ENST00000297689 SLURP1P55000 103 aa14.53□□□□□ -0.08
NFIL3-201ENST00000297689 NSUN5P1Q3KNT7 163 aa14.53□□□□□ -0.08
NFIL3-201ENST00000297689 NOTCH2Q04721 2471 aa14.53□□□□□ -0.08
NFIL3-201ENST00000297689 TRAV2A0A0B4J234 112 aa14.53□□□□□ -0.08
NFIL3-201ENST00000297689 C12orf74Q32Q52 190 aa14.53□□□□□ -0.08
NFIL3-201ENST00000297689 HIST1H4GQ99525 98 aa14.53□□□□□ -0.08
NFIL3-201ENST00000297689 EDA2RQ9HAV5 297 aa14.53□□□□□ -0.08
NFIL3-201ENST00000297689 TRGV11A0A075B6L2 103 aa14.52□□□□□ -0.09
NFIL3-201ENST00000297689 P0DMU3 169 aa14.52□□□□□ -0.09
NFIL3-201ENST00000297689 FAM231AP0DMU4 169 aa14.52□□□□□ -0.09
NFIL3-201ENST00000297689 FAM231CP0DMU5 169 aa14.52□□□□□ -0.09
NFIL3-201ENST00000297689 RHOHQ15669 191 aa14.52□□□□□ -0.09
NFIL3-201ENST00000297689 ZNF876PQ49A33 203 aa14.52□□□□□ -0.09
NFIL3-201ENST00000297689 TRPT1Q86TN4 253 aaKnown RBP14.52□□□□□ -0.09
NFIL3-201ENST00000297689 DEFB104AQ8WTQ1 72 aa14.52□□□□□ -0.09
NFIL3-201ENST00000297689 IGLL5B9A064 214 aa14.51□□□□□ -0.09
NFIL3-201ENST00000297689 ZNF56Q15929 161 aa14.51□□□□□ -0.09
NFIL3-201ENST00000297689 DEFB136Q30KP8 78 aa14.51□□□□□ -0.09
NFIL3-201ENST00000297689 H3BMM0 161 aa14.51□□□□□ -0.09
NFIL3-201ENST00000297689 MYO9AB2RTY4 2548 aa14.5□□□□□ -0.09
NFIL3-201ENST00000297689 KNCNA6PVL3 124 aa14.5□□□□□ -0.09
NFIL3-201ENST00000297689 SPAG8Q99932 426 aaPredicted RBP14.5□□□□□ -0.09
NFIL3-201ENST00000297689 ACANP16112 2415 aa14.5□□□□□ -0.09
NFIL3-201ENST00000297689 RBMY1BA6NDE4 496 aaKnown RBP14.5□□□□□ -0.09
NFIL3-201ENST00000297689 RBMY1EA6NEQ0 496 aaKnown RBP14.5□□□□□ -0.09
NFIL3-201ENST00000297689 RBMY1DP0C7P1 496 aaKnown RBP14.5□□□□□ -0.09
NFIL3-201ENST00000297689 KRTAP1-1Q07627 177 aa14.5□□□□□ -0.09
NFIL3-201ENST00000297689 DEFB131AP59861 70 aa14.49□□□□□ -0.09
NFIL3-201ENST00000297689 ZNRF2Q8NHG8 242 aa14.49□□□□□ -0.09
NFIL3-201ENST00000297689 BAHCC1Q9P281 2608 aa14.49□□□□□ -0.09
NFIL3-201ENST00000297689 ZNF815PA8K554 130 aa14.48□□□□□ -0.09
NFIL3-201ENST00000297689 CD300EQ496F6 205 aaPredicted RBP14.48□□□□□ -0.09
NFIL3-201ENST00000297689 C4orf3Q8WVX3 66 aa14.48□□□□□ -0.09
NFIL3-201ENST00000297689 K7ERU9 68 aa14.48□□□□□ -0.09
NFIL3-201ENST00000297689 PLEKHB2Q96CS7 222 aa14.48□□□□□ -0.09
NFIL3-201ENST00000297689 NFE4Q86UQ8 179 aa14.47□□□□□ -0.09
NFIL3-201ENST00000297689 TMEM61Q8N0U2 210 aa14.47□□□□□ -0.09
NFIL3-201ENST00000297689 C20orf203Q8NBC4 194 aa14.47□□□□□ -0.09
NFIL3-201ENST00000297689 KLHL30-AS1Q8NEE0 82 aa14.47□□□□□ -0.09
NFIL3-201ENST00000297689 SAP30O75446 220 aa14.46□□□□□ -0.09
NFIL3-201ENST00000297689 EMP1P54849 157 aa14.46□□□□□ -0.09
NFIL3-201ENST00000297689 TMEM86BQ8N661 226 aa14.46□□□□□ -0.09
NFIL3-201ENST00000297689 PIK3CD-AS1Q5SR53 167 aa14.46□□□□□ -0.09
NFIL3-201ENST00000297689 ANK3Q12955 4377 aaKnown RBP14.45□□□□□ -0.1
NFIL3-201ENST00000297689 I3L3M4 83 aa14.45□□□□□ -0.1
NFIL3-201ENST00000297689 RNF151Q2KHN1 245 aa14.45□□□□□ -0.1
NFIL3-201ENST00000297689 PTH2Q96A98 100 aa14.45□□□□□ -0.1
NFIL3-201ENST00000297689 PEMTQ9UBM1 199 aa14.45□□□□□ -0.1
NFIL3-201ENST00000297689 HERVK_113P61574 105 aa14.45□□□□□ -0.1
NFIL3-201ENST00000297689 DLX4Q92988 240 aaPredicted RBP14.45□□□□□ -0.1
NFIL3-201ENST00000297689 ZNF479Q96JC4 524 aa14.45□□□□□ -0.1
NFIL3-201ENST00000297689 AMELXQ99217 191 aa14.45□□□□□ -0.1
NFIL3-201ENST00000297689 DNAJC9-AS1A6NH13 148 aa14.44□□□□□ -0.1
NFIL3-201ENST00000297689 TSPEAR-AS2P59090 65 aa14.44□□□□□ -0.1
NFIL3-201ENST00000297689 RRN3P1Q2M238 152 aa14.44□□□□□ -0.1
NFIL3-201ENST00000297689 HIST2H2BDQ6DRA6 164 aa14.44□□□□□ -0.1
NFIL3-201ENST00000297689 SONP18583 2426 aaKnown RBP14.44□□□□□ -0.1
NFIL3-201ENST00000297689 A0A0J9YY99 117 aa14.43□□□□□ -0.1
NFIL3-201ENST00000297689 Q6ZSV7 163 aa14.43□□□□□ -0.1
NFIL3-201ENST00000297689 OPRPNQ99935 248 aaPredicted RBP14.43□□□□□ -0.1
NFIL3-201ENST00000297689 PCP4P48539 62 aa14.43□□□□□ -0.1
NFIL3-201ENST00000297689 UBE2D1P51668 147 aa14.43□□□□□ -0.1
NFIL3-201ENST00000297689 DUX3Q96PT4 197 aa14.43□□□□□ -0.1
NFIL3-201ENST00000297689 LINC00467Q9BRT7 94 aa14.43□□□□□ -0.1
NFIL3-201ENST00000297689 ESM1Q9NQ30 184 aa14.43□□□□□ -0.1
NFIL3-201ENST00000297689 DEFB114Q30KQ6 69 aa14.42□□□□□ -0.1
NFIL3-201ENST00000297689 TEX29Q8N6K0 151 aa14.42□□□□□ -0.1
NFIL3-201ENST00000297689 FAM104AQ969W3 186 aa14.42□□□□□ -0.1
NFIL3-201ENST00000297689 MAP6D1Q9H9H5 199 aa14.42□□□□□ -0.1
NFIL3-201ENST00000297689 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
NFIL3-201ENST00000297689 G3V4G9 280 aa14.42□□□□□ -0.1
NFIL3-201ENST00000297689 OTOGQ6ZRI0 2925 aa14.41□□□□□ -0.1
NFIL3-201ENST00000297689 IGLV4-3A0A075B6K6 122 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 M0R2P5 195 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 PRM2P04554 102 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 PROK1P58294 105 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 SCGB2A2Q13296 93 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 SCGB1D4Q6XE38 83 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 SPANXB1Q9NS25 103 aaPredicted RBP14.4□□□□□ -0.1
NFIL3-201ENST00000297689 A8MWV9 139 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 TMEM170BQ5T4T1 132 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 PYGO1Q9Y3Y4 419 aa14.4□□□□□ -0.1
NFIL3-201ENST00000297689 FLNBO75369 2602 aaKnown RBP14.39□□□□□ -0.11
NFIL3-201ENST00000297689 C11orf72Q8NBR9 251 aa14.39□□□□□ -0.11
NFIL3-201ENST00000297689 CLUHP3Q96NS8 147 aa14.39□□□□□ -0.11
NFIL3-201ENST00000297689 TMEM223A0PJW6 202 aa14.38□□□□□ -0.11
NFIL3-201ENST00000297689 SLC25A29Q8N8R3 303 aa14.38□□□□□ -0.11
NFIL3-201ENST00000297689 YAE1D1Q9NRH1 226 aa14.38□□□□□ -0.11
NFIL3-201ENST00000297689 VPS25Q9BRG1 176 aa14.38□□□□□ -0.11
NFIL3-201ENST00000297689 J3QQQ9 107 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 HTN1P15515 57 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 TMEM238LA0A1B0GVL6 79 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 A6NJY4 79 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 ZNF22P17026 224 aaPredicted RBP14.37□□□□□ -0.11
NFIL3-201ENST00000297689 ZNF415Q09FC8 603 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 SRSF9Q13242 221 aaKnown RBP eCLIP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms