RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 IGLV4-3A0A075B6K6 122 aa15.05■□□□□ -0
TMED4-201ENST00000289577 TRAV12-2A0A075B6T6 113 aa15.05■□□□□ -0
TMED4-201ENST00000289577 IGHV1OR15-1A0A075B7D0 117 aa15.05■□□□□ -0
TMED4-201ENST00000289577 TRAV2A0A0B4J234 112 aa15.04■□□□□ -0
TMED4-201ENST00000289577 TMEM262E9PQX1 116 aa15.04■□□□□ -0
TMED4-201ENST00000289577 M0R2P5 195 aa15.04■□□□□ -0
TMED4-201ENST00000289577 HIVEP3Q5T1R4 2406 aa15.04■□□□□ -0
TMED4-201ENST00000289577 C19orf84I3L1E1 186 aa15.04■□□□□ -0
TMED4-201ENST00000289577 TRAV26-1A0A087WT03 109 aa15.03■□□□□ -0
TMED4-201ENST00000289577 A0A0J9YXV3 536 aa15.03■□□□□ -0
TMED4-201ENST00000289577 C9JAW5 83 aa15.03■□□□□ -0
TMED4-201ENST00000289577 ZNF580Q9UK33 172 aa15.03■□□□□ -0
TMED4-201ENST00000289577 AKAP6Q13023 2319 aa15.03■□□□□ -0
TMED4-201ENST00000289577 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.02■□□□□ -0
TMED4-201ENST00000289577 PIMREGQ9BSJ6 248 aa15.02■□□□□ -0
TMED4-201ENST00000289577 COL6A6A6NMZ7 2263 aa15.02■□□□□ -0
TMED4-201ENST00000289577 LINC01600Q96MT4 127 aa15.02□□□□□ -0.01
TMED4-201ENST00000289577 IGHV3-64A0A075B6Q5 118 aa15.01□□□□□ -0.01
TMED4-201ENST00000289577 A0A0J9YXY3 114 aa15.01□□□□□ -0.01
TMED4-201ENST00000289577 IGKV3-20P01619 116 aa15.01□□□□□ -0.01
TMED4-201ENST00000289577 K7EQG2 157 aa15.01□□□□□ -0.01
TMED4-201ENST00000289577 PSMB8P28062 276 aa15.01□□□□□ -0.01
TMED4-201ENST00000289577 SNRPD3P62318 126 aaKnown RBP15.01□□□□□ -0.01
TMED4-201ENST00000289577 CLUHP3Q96NS8 147 aa15.01□□□□□ -0.01
TMED4-201ENST00000289577 RNF152Q8N8N0 203 aa15□□□□□ -0.01
TMED4-201ENST00000289577 C10orf105Q8TEF2 133 aa15□□□□□ -0.01
TMED4-201ENST00000289577 FAM104AQ969W3 186 aa15□□□□□ -0.01
TMED4-201ENST00000289577 PYGO1Q9Y3Y4 419 aa15□□□□□ -0.01
TMED4-201ENST00000289577 SPTAN1Q13813 2472 aaKnown RBP14.99□□□□□ -0.01
TMED4-201ENST00000289577 SPINK13Q1W4C9 94 aa14.99□□□□□ -0.01
TMED4-201ENST00000289577 EDA2RQ9HAV5 297 aa14.99□□□□□ -0.01
TMED4-201ENST00000289577 LITAFQ99732 161 aa14.98□□□□□ -0.01
TMED4-201ENST00000289577 IGF2RP11717 2491 aa14.98□□□□□ -0.01
TMED4-201ENST00000289577 H7C2G1 150 aa14.98□□□□□ -0.01
TMED4-201ENST00000289577 ELANEP08246 267 aa14.98□□□□□ -0.01
TMED4-201ENST00000289577 IGHV3-30-3P0DP02 117 aa14.98□□□□□ -0.01
TMED4-201ENST00000289577 ATXN8Q156A1 80 aa14.98□□□□□ -0.01
TMED4-201ENST00000289577 CITED1Q99966 193 aa14.98□□□□□ -0.01
TMED4-201ENST00000289577 MRPS36P82909 103 aaKnown RBP14.97□□□□□ -0.01
TMED4-201ENST00000289577 TMEM95Q3KNT9 176 aa14.97□□□□□ -0.01
TMED4-201ENST00000289577 CELSR1Q9NYQ6 3014 aa14.97□□□□□ -0.01
TMED4-201ENST00000289577 TRBV30A0A0K0K1B3 111 aa14.97□□□□□ -0.01
TMED4-201ENST00000289577 LINC01620Q4KN68 170 aa14.97□□□□□ -0.01
TMED4-201ENST00000289577 TRGV11A0A075B6L2 103 aa14.96□□□□□ -0.02
TMED4-201ENST00000289577 SPXQ9BT56 116 aa14.95□□□□□ -0.02
TMED4-201ENST00000289577 TIMM21Q9BVV7 248 aa14.95□□□□□ -0.02
TMED4-201ENST00000289577 Q1RN00 199 aa14.94□□□□□ -0.02
TMED4-201ENST00000289577 ZFAND6Q6FIF0 208 aa14.94□□□□□ -0.02
TMED4-201ENST00000289577 MSMBP08118 114 aa14.94□□□□□ -0.02
TMED4-201ENST00000289577 CD28P10747 220 aa14.93□□□□□ -0.02
TMED4-201ENST00000289577 NTN5Q8WTR8 489 aaPredicted RBP14.93□□□□□ -0.02
TMED4-201ENST00000289577 RNF183Q96D59 192 aa14.93□□□□□ -0.02
TMED4-201ENST00000289577 TMEM89A2RUT3 159 aa14.93□□□□□ -0.02
TMED4-201ENST00000289577 TRIAP1O43715 76 aa14.93□□□□□ -0.02
TMED4-201ENST00000289577 RPL13AP40429 203 aaKnown RBP14.93□□□□□ -0.02
TMED4-201ENST00000289577 SPANXDQ9BXN6 97 aa14.93□□□□□ -0.02
TMED4-201ENST00000289577 SPANXCQ9NY87 97 aa14.93□□□□□ -0.02
TMED4-201ENST00000289577 VPS13CQ709C8 3753 aa14.92□□□□□ -0.02
TMED4-201ENST00000289577 IGHV1-58A0A0C4DH39 117 aa14.92□□□□□ -0.02
TMED4-201ENST00000289577 TRBV10-2A0A0K0K1G8 114 aa14.92□□□□□ -0.02
TMED4-201ENST00000289577 ADARB2-AS1A8MUL3 147 aa14.92□□□□□ -0.02
TMED4-201ENST00000289577 C10orf99Q6UWK7 81 aa14.92□□□□□ -0.02
TMED4-201ENST00000289577 AVPP01185 164 aa14.92□□□□□ -0.02
TMED4-201ENST00000289577 TEX29Q8N6K0 151 aa14.92□□□□□ -0.02
TMED4-201ENST00000289577 IGHV4-30-2A0A087WSY4 118 aa14.91□□□□□ -0.02
TMED4-201ENST00000289577 TRAV8-3A0A0A6YYJ7 113 aa14.9□□□□□ -0.02
TMED4-201ENST00000289577 RBMY1A1P0DJD3 496 aaKnown RBP14.9□□□□□ -0.02
TMED4-201ENST00000289577 RBMY1CP0DJD4 496 aa14.9□□□□□ -0.02
TMED4-201ENST00000289577 RBMY1FQ15415 496 aaKnown RBP14.9□□□□□ -0.02
TMED4-201ENST00000289577 ADAMTSL4-AS1Q5T5F5 129 aa14.9□□□□□ -0.02
TMED4-201ENST00000289577 LY6DQ14210 128 aa14.9□□□□□ -0.02
TMED4-201ENST00000289577 Q5PR19 223 aa14.9□□□□□ -0.02
TMED4-201ENST00000289577 CCL19Q99731 98 aa14.9□□□□□ -0.02
TMED4-201ENST00000289577 PROK1P58294 105 aa14.89□□□□□ -0.03
TMED4-201ENST00000289577 CEMP1Q6PRD7 247 aaPredicted RBP14.89□□□□□ -0.03
TMED4-201ENST00000289577 ANAPC13Q9BS18 74 aa14.89□□□□□ -0.03
TMED4-201ENST00000289577 NDUFA12Q9UI09 145 aa14.89□□□□□ -0.03
TMED4-201ENST00000289577 TINCRA0A1B0GVN0 87 aa14.88□□□□□ -0.03
TMED4-201ENST00000289577 SYNJ2BPP57105 145 aa14.88□□□□□ -0.03
TMED4-201ENST00000289577 VSIG2Q96IQ7 327 aa14.88□□□□□ -0.03
TMED4-201ENST00000289577 BEX4Q9NWD9 120 aaPredicted RBP14.88□□□□□ -0.03
TMED4-201ENST00000289577 PRRC2AP48634 2157 aaKnown RBP14.88□□□□□ -0.03
TMED4-201ENST00000289577 PRSS2P07478 247 aa14.88□□□□□ -0.03
TMED4-201ENST00000289577 MIAQ16674 131 aa14.88□□□□□ -0.03
TMED4-201ENST00000289577 ICOSQ9Y6W8 199 aa14.88□□□□□ -0.03
TMED4-201ENST00000289577 DOPEY2Q9Y3R5 2298 aa14.88□□□□□ -0.03
TMED4-201ENST00000289577 IGHV3-73A0A0B4J1V6 119 aa14.87□□□□□ -0.03
TMED4-201ENST00000289577 TEX49A0A1B0GTD5 131 aa14.87□□□□□ -0.03
TMED4-201ENST00000289577 IGHV4-59P01825 116 aa14.86□□□□□ -0.03
TMED4-201ENST00000289577 TNFRSF18Q9Y5U5 241 aa14.86□□□□□ -0.03
TMED4-201ENST00000289577 CHCHD7Q9BUK0 85 aa14.86□□□□□ -0.03
TMED4-201ENST00000289577 SPANXA1Q9NS26 97 aa14.86□□□□□ -0.03
TMED4-201ENST00000289577 GNLYP22749 145 aa14.85□□□□□ -0.03
TMED4-201ENST00000289577 GATA3P23771 443 aa14.85□□□□□ -0.03
TMED4-201ENST00000289577 ATP5J2P56134 94 aa14.85□□□□□ -0.03
TMED4-201ENST00000289577 UBE2D4Q9Y2X8 147 aa14.85□□□□□ -0.03
TMED4-201ENST00000289577 SNCGO76070 127 aa14.85□□□□□ -0.03
TMED4-201ENST00000289577 RNASE13Q5GAN3 156 aaKnown RBP14.85□□□□□ -0.03
TMED4-201ENST00000289577 H3BMM0 161 aa14.84□□□□□ -0.03
TMED4-201ENST00000289577 NHLRC4P0CG21 123 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms