RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 IGKV1D-37A0A075B6S9 117 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 LGALS9O00182 355 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 DSCR8Q96T75 97 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 MTORP42345 2549 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 LY6G6DO95868 133 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 TRBV10-1A0A0K0K1A3 114 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 HAMPP81172 84 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 DEFB114Q30KQ6 69 aa14.1□□□□□ -0.15
PCDH1-201ENST00000287008 TIRAPP58753 221 aa14.09□□□□□ -0.15
PCDH1-201ENST00000287008 NDUFA1O15239 70 aa14.09□□□□□ -0.15
PCDH1-201ENST00000287008 CTRLP40313 264 aa14.09□□□□□ -0.15
PCDH1-201ENST00000287008 GTSF1Q8WW33 167 aa14.09□□□□□ -0.15
PCDH1-201ENST00000287008 DSCAML1Q8TD84 2053 aa14.09□□□□□ -0.15
PCDH1-201ENST00000287008 COL4A4P53420 1690 aaPredicted RBP14.08□□□□□ -0.15
PCDH1-201ENST00000287008 K7EQG2 157 aa14.08□□□□□ -0.16
PCDH1-201ENST00000287008 CEND1Q8N111 149 aa14.08□□□□□ -0.16
PCDH1-201ENST00000287008 BRWD1-AS2P59051 145 aa14.08□□□□□ -0.16
PCDH1-201ENST00000287008 C10orf142B7Z368 130 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 TRBV6-1A0A0K0K1D8 114 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 C9orf118A6NHY6 69 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 ARHGAP21Q5T5U3 1957 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 SIVA1O15304 175 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 IFITM1P13164 125 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 PRSS47A8MTI9 375 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 RPL39P62891 51 aaKnown RBP14.07□□□□□ -0.16
PCDH1-201ENST00000287008 BVES-AS1Q5T3Y7 98 aa14.07□□□□□ -0.16
PCDH1-201ENST00000287008 POLQO75417 2590 aa14.06□□□□□ -0.16
PCDH1-201ENST00000287008 SRCAPQ6ZRS2 3230 aa14.06□□□□□ -0.16
PCDH1-201ENST00000287008 ETDBQ3ZM63 59 aa14.05□□□□□ -0.16
PCDH1-201ENST00000287008 Q6ZPA2 131 aa14.05□□□□□ -0.16
PCDH1-201ENST00000287008 SND1-IT1Q9HBX3 110 aa14.05□□□□□ -0.16
PCDH1-201ENST00000287008 PLA2G2AP14555 144 aa14.05□□□□□ -0.16
PCDH1-201ENST00000287008 SPAG11BQ08648 103 aa14.05□□□□□ -0.16
PCDH1-201ENST00000287008 COX7B2Q8TF08 81 aa14.05□□□□□ -0.16
PCDH1-201ENST00000287008 SMIM9A6NGZ8 99 aa14.04□□□□□ -0.16
PCDH1-201ENST00000287008 LY6LH3BQJ8 138 aa14.04□□□□□ -0.16
PCDH1-201ENST00000287008 CFC1BP0CG36 223 aa14.04□□□□□ -0.16
PCDH1-201ENST00000287008 CFC1P0CG37 223 aa14.04□□□□□ -0.16
PCDH1-201ENST00000287008 CARD19Q96LW7 228 aa14.04□□□□□ -0.16
PCDH1-201ENST00000287008 ARHGAP32A7KAX9 2087 aa14.04□□□□□ -0.16
PCDH1-201ENST00000287008 FAM222AQ5U5X8 452 aa14.03□□□□□ -0.16
PCDH1-201ENST00000287008 PCP2Q8IVA1 136 aa14.03□□□□□ -0.16
PCDH1-201ENST00000287008 DEFB105AQ8NG35 78 aa14.03□□□□□ -0.16
PCDH1-201ENST00000287008 TIMM17AQ99595 171 aa14.03□□□□□ -0.16
PCDH1-201ENST00000287008 ALPK3Q96L96 1907 aa14.03□□□□□ -0.16
PCDH1-201ENST00000287008 Q6ZTI0 123 aa14.02□□□□□ -0.16
PCDH1-201ENST00000287008 PPDPFLQ8WWR9 84 aa14.02□□□□□ -0.16
PCDH1-201ENST00000287008 CEP192Q8TEP8 1941 aa14.02□□□□□ -0.16
PCDH1-201ENST00000287008 COA6Q5JTJ3 125 aaKnown RBP14.02□□□□□ -0.16
PCDH1-201ENST00000287008 C1orf229Q6ZS94 237 aaPredicted RBP14.02□□□□□ -0.16
PCDH1-201ENST00000287008 ODF3Q96PU9 254 aa14.02□□□□□ -0.16
PCDH1-201ENST00000287008 EPG5Q9HCE0 2579 aa14.02□□□□□ -0.17
PCDH1-201ENST00000287008 CXCL5P42830 114 aa14.02□□□□□ -0.17
PCDH1-201ENST00000287008 TRAV26-1A0A087WT03 109 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 LINC01006Q8NI28 216 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 TNRC6AQ8NDV7 1962 aaKnown RBP14.01□□□□□ -0.17
PCDH1-201ENST00000287008 CRIP3Q6Q6R5 217 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 SPATA25Q9BR10 227 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 C11orf1Q9H5F2 150 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 C12orf74Q32Q52 190 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 IGHV4-4A0A075B6R2 117 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 CRYGBP07316 175 aa14.01□□□□□ -0.17
PCDH1-201ENST00000287008 HILS1P60008 231 aa14□□□□□ -0.17
PCDH1-201ENST00000287008 C20orf203Q8NBC4 194 aa14□□□□□ -0.17
PCDH1-201ENST00000287008 LYRM9A8MSI8 78 aa14□□□□□ -0.17
PCDH1-201ENST00000287008 CCL25O15444 150 aa14□□□□□ -0.17
PCDH1-201ENST00000287008 GTSF1LQ9H1H1 148 aa14□□□□□ -0.17
PCDH1-201ENST00000287008 PSMG3-AS1Q96PY0 264 aa14□□□□□ -0.17
PCDH1-201ENST00000287008 TINCRA0A1B0GVN0 87 aa13.99□□□□□ -0.17
PCDH1-201ENST00000287008 C10orf99Q6UWK7 81 aa13.99□□□□□ -0.17
PCDH1-201ENST00000287008 C19orf71A6NCJ1 209 aa13.99□□□□□ -0.17
PCDH1-201ENST00000287008 K7ERJ3 54 aa13.99□□□□□ -0.17
PCDH1-201ENST00000287008 MAJINQ3KP22 176 aa13.99□□□□□ -0.17
PCDH1-201ENST00000287008 Q6ZVH6 145 aa13.98□□□□□ -0.17
PCDH1-201ENST00000287008 CDSNQ15517 529 aa13.98□□□□□ -0.17
PCDH1-201ENST00000287008 ZNF106Q9H2Y7 1883 aaKnown RBP13.98□□□□□ -0.17
PCDH1-201ENST00000287008 LINC01545Q5VT33 79 aa13.98□□□□□ -0.17
PCDH1-201ENST00000287008 ORMDL1Q9P0S3 153 aa13.98□□□□□ -0.17
PCDH1-201ENST00000287008 DEFB131BA0A096LNP1 70 aa13.98□□□□□ -0.17
PCDH1-201ENST00000287008 hADV29S1A0JD25 119 aa13.97□□□□□ -0.17
PCDH1-201ENST00000287008 ZNF80P51504 273 aaPredicted RBP13.97□□□□□ -0.17
PCDH1-201ENST00000287008 LINC00173Q6ZV60 143 aa13.97□□□□□ -0.17
PCDH1-201ENST00000287008 F8W1H4 67 aa13.97□□□□□ -0.17
PCDH1-201ENST00000287008 RNF183Q96D59 192 aa13.96□□□□□ -0.17
PCDH1-201ENST00000287008 A0A1W2PPM0 123 aa13.96□□□□□ -0.17
PCDH1-201ENST00000287008 H0YGX0 51 aa13.96□□□□□ -0.17
PCDH1-201ENST00000287008 LINC00482Q8N8I6 264 aa13.96□□□□□ -0.17
PCDH1-201ENST00000287008 OPRPNQ99935 248 aaPredicted RBP13.96□□□□□ -0.17
PCDH1-201ENST00000287008 TRAV12-1A0A0B4J245 112 aa13.96□□□□□ -0.17
PCDH1-201ENST00000287008 UBE2AP49459 152 aa13.96□□□□□ -0.17
PCDH1-201ENST00000287008 H3BMG7 143 aa13.96□□□□□ -0.18
PCDH1-201ENST00000287008 TOMM6Q96B49 74 aa13.95□□□□□ -0.18
PCDH1-201ENST00000287008 FUSP35637 526 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDH1-201ENST00000287008 ANKRD39Q53RE8 183 aa13.95□□□□□ -0.18
PCDH1-201ENST00000287008 ZNF702PQ9H963 129 aa13.95□□□□□ -0.18
PCDH1-201ENST00000287008 ZFAND3Q9H8U3 227 aa13.95□□□□□ -0.18
PCDH1-201ENST00000287008 BAALCQ8WXS3 180 aa13.95□□□□□ -0.18
PCDH1-201ENST00000287008 PSMB8P28062 276 aa13.94□□□□□ -0.18
PCDH1-201ENST00000287008 C14orf177Q52M58 125 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms