RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 FASNP49327 2511 aaKnown RBP13.07□□□□□ -0.32
SRF-201ENST00000265354 SUMO4Q6EEV6 95 aa13.07□□□□□ -0.32
SRF-201ENST00000265354 IGKV3D-7A0A0C4DH55 119 aa13.06□□□□□ -0.32
SRF-201ENST00000265354 RBM3P98179 157 aaKnown RBP13.06□□□□□ -0.32
SRF-201ENST00000265354 PIP4P1Q86T03 277 aa13.06□□□□□ -0.32
SRF-201ENST00000265354 ADAMTS20P59510 1910 aa13.06□□□□□ -0.32
SRF-201ENST00000265354 A0A1B0GX51 115 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 TRAV12-1A0A0B4J245 112 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 TMEM190Q8WZ59 177 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 RASL10AQ92737 203 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 TEX49A0A1B0GTD5 131 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 TRBV6-1A0A0K0K1D8 114 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 CENPVL3A0A0U1RRI6 287 aa13.05□□□□□ -0.32
SRF-201ENST00000265354 PPDPFQ9H3Y8 114 aa13.04□□□□□ -0.32
SRF-201ENST00000265354 DMXL2Q8TDJ6 3036 aa13.04□□□□□ -0.32
SRF-201ENST00000265354 TRGV2A0A075B6R0 118 aa13.04□□□□□ -0.32
SRF-201ENST00000265354 LINC01620Q4KN68 170 aa13.04□□□□□ -0.32
SRF-201ENST00000265354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.04□□□□□ -0.32
SRF-201ENST00000265354 IGKV2-29A2NJV5 120 aaPredicted RBP13.04□□□□□ -0.32
SRF-201ENST00000265354 TRGV1A0A0A0MS02 117 aa13.03□□□□□ -0.32
SRF-201ENST00000265354 F5H768 121 aa13.03□□□□□ -0.32
SRF-201ENST00000265354 MORN3Q6PF18 240 aaPredicted RBP13.03□□□□□ -0.32
SRF-201ENST00000265354 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
SRF-201ENST00000265354 HERVK_113P63121 156 aa13.03□□□□□ -0.32
SRF-201ENST00000265354 Q8N1Y9 231 aa13.03□□□□□ -0.32
SRF-201ENST00000265354 MDFICQ9P1T7 246 aa13.03□□□□□ -0.32
SRF-201ENST00000265354 U3KQK5 164 aa13.03□□□□□ -0.32
SRF-201ENST00000265354 LINC00158P58513 81 aa13.02□□□□□ -0.32
SRF-201ENST00000265354 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.32
SRF-201ENST00000265354 BRK1Q8WUW1 75 aa13.02□□□□□ -0.32
SRF-201ENST00000265354 TOMM6Q96B49 74 aa13.02□□□□□ -0.32
SRF-201ENST00000265354 XCL2Q9UBD3 114 aa13.02□□□□□ -0.32
SRF-201ENST00000265354 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.32
SRF-201ENST00000265354 TMEM141Q96I45 108 aa13.02□□□□□ -0.32
SRF-201ENST00000265354 TINCRA0A1B0GVN0 87 aa13.02□□□□□ -0.33
SRF-201ENST00000265354 FAM223BA6NKX1 122 aa13.02□□□□□ -0.33
SRF-201ENST00000265354 GNLYP22749 145 aa13.02□□□□□ -0.33
SRF-201ENST00000265354 FAM223AQ8IWN6 122 aa13.02□□□□□ -0.33
SRF-201ENST00000265354 I3L3M4 83 aa13.01□□□□□ -0.33
SRF-201ENST00000265354 LINC00694P0DN24 101 aa13.01□□□□□ -0.33
SRF-201ENST00000265354 IGHV1OR15-1A0A075B7D0 117 aa13.01□□□□□ -0.33
SRF-201ENST00000265354 LOC400499M0QZD8 3231 aa13.01□□□□□ -0.33
SRF-201ENST00000265354 TACC2O95359 2948 aa13□□□□□ -0.33
SRF-201ENST00000265354 CFHR3Q02985 330 aa13□□□□□ -0.33
SRF-201ENST00000265354 PRR9Q5T870 116 aa13□□□□□ -0.33
SRF-201ENST00000265354 CLEC2BQ92478 149 aa13□□□□□ -0.33
SRF-201ENST00000265354 AJUBAQ96IF1 538 aa13□□□□□ -0.33
SRF-201ENST00000265354 NDUFA4O00483 81 aa13□□□□□ -0.33
SRF-201ENST00000265354 Q8NA96 180 aa13□□□□□ -0.33
SRF-201ENST00000265354 USMG5Q96IX5 58 aa13□□□□□ -0.33
SRF-201ENST00000265354 C20orf173Q96LM9 149 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 PRRC2AP48634 2157 aaKnown RBP12.99□□□□□ -0.33
SRF-201ENST00000265354 Q6ZS46 218 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 ATP6V0E2Q8NHE4 81 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 LOC107984640A0A0U1RRK4 108 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 hADV29S1A0JD25 119 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 P0DMU3 169 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 FAM231AP0DMU4 169 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 FAM231CP0DMU5 169 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 C9orf47Q6ZRZ4 202 aa12.99□□□□□ -0.33
SRF-201ENST00000265354 IGHV7-4-1A0A0J9YVY3 117 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 FAM110AQ9BQ89 295 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 HRCT1Q6UXD1 115 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 NRACQ8N912 160 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 IGHV4-38-2P0DP08 117 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
SRF-201ENST00000265354 PAX4O43316 350 aa12.97□□□□□ -0.33
SRF-201ENST00000265354 HOXD3P31249 432 aaPredicted RBP12.97□□□□□ -0.33
SRF-201ENST00000265354 NEXN-AS1Q8NBZ9 246 aa12.97□□□□□ -0.33
SRF-201ENST00000265354 COPS9Q8WXC6 57 aa12.97□□□□□ -0.33
SRF-201ENST00000265354 ZNRF2Q8NHG8 242 aa12.97□□□□□ -0.33
SRF-201ENST00000265354 MRGPRG-AS1Q2M3A8 158 aa12.96□□□□□ -0.33
SRF-201ENST00000265354 DCHS1Q96JQ0 3298 aa12.96□□□□□ -0.33
SRF-201ENST00000265354 PFN2P35080 140 aa12.96□□□□□ -0.34
SRF-201ENST00000265354 ATMQ13315 3056 aa12.96□□□□□ -0.34
SRF-201ENST00000265354 A8MZ25 164 aa12.96□□□□□ -0.34
SRF-201ENST00000265354 MRPS12O15235 138 aaKnown RBP12.96□□□□□ -0.34
SRF-201ENST00000265354 PEMTQ9UBM1 199 aa12.96□□□□□ -0.34
SRF-201ENST00000265354 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
SRF-201ENST00000265354 A0A0J9YY99 117 aa12.95□□□□□ -0.34
SRF-201ENST00000265354 K7ENP7 123 aa12.95□□□□□ -0.34
SRF-201ENST00000265354 TMEM243Q9BU79 118 aa12.95□□□□□ -0.34
SRF-201ENST00000265354 LY6LH3BQJ8 138 aa12.94□□□□□ -0.34
SRF-201ENST00000265354 STHQ8IWL8 128 aa12.94□□□□□ -0.34
SRF-201ENST00000265354 KLK5Q9Y337 293 aaPredicted RBP12.94□□□□□ -0.34
SRF-201ENST00000265354 IGHG4P01861 327 aa12.94□□□□□ -0.34
SRF-201ENST00000265354 PRM2P04554 102 aa12.94□□□□□ -0.34
SRF-201ENST00000265354 ZFAND3Q9H8U3 227 aa12.94□□□□□ -0.34
SRF-201ENST00000265354 ACANP16112 2415 aa12.93□□□□□ -0.34
SRF-201ENST00000265354 INAFM2P0DMQ5 153 aa12.93□□□□□ -0.34
SRF-201ENST00000265354 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
SRF-201ENST00000265354 HAMPP81172 84 aa12.93□□□□□ -0.34
SRF-201ENST00000265354 C5orf56Q8N8D9 126 aa12.93□□□□□ -0.34
SRF-201ENST00000265354 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
SRF-201ENST00000265354 Q9H8V8 135 aa12.93□□□□□ -0.34
SRF-201ENST00000265354 VPREB3Q9UKI3 123 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms