RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
SHPK-201ENST00000225519 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 SPXQ9BT56 116 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 P0DMU3 169 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
SHPK-201ENST00000225519 A0A0J9YXV3 536 aa10.69□□□□□ -0.7
SHPK-201ENST00000225519 IGHV3-11P01762 117 aa10.69□□□□□ -0.7
SHPK-201ENST00000225519 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
SHPK-201ENST00000225519 EBI3Q14213 229 aa10.69□□□□□ -0.7
SHPK-201ENST00000225519 SHISA2Q6UWI4 295 aa10.69□□□□□ -0.7
SHPK-201ENST00000225519 TRAV12-3A0A0B4J271 114 aa10.68□□□□□ -0.7
SHPK-201ENST00000225519 TRIAP1O43715 76 aa10.68□□□□□ -0.7
SHPK-201ENST00000225519 MED14OSP0DP75 135 aa10.68□□□□□ -0.7
SHPK-201ENST00000225519 GRNP28799 593 aaKnown RBP10.68□□□□□ -0.7
SHPK-201ENST00000225519 ITLN2Q8WWU7 325 aaPredicted RBP10.68□□□□□ -0.7
SHPK-201ENST00000225519 UNQ9165/PRO28630Q6UXU0 137 aa10.68□□□□□ -0.7
SHPK-201ENST00000225519 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
SHPK-201ENST00000225519 SAA4P35542 130 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 RPL13AP40429 203 aaKnown RBP10.67□□□□□ -0.7
SHPK-201ENST00000225519 U3KQE9 123 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 A0A087WW49 117 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 TMEM223A0PJW6 202 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 ODF3Q96PU9 254 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 MUC4Q99102 2169 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 TRAV41A0A0B4J266 112 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 AMELXQ99217 191 aa10.67□□□□□ -0.7
SHPK-201ENST00000225519 SORL1Q92673 2214 aa10.66□□□□□ -0.7
SHPK-201ENST00000225519 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
SHPK-201ENST00000225519 LRBAP50851 2863 aa10.66□□□□□ -0.7
SHPK-201ENST00000225519 LGALS9O00182 355 aa10.66□□□□□ -0.7
SHPK-201ENST00000225519 ZNF22P17026 224 aaPredicted RBP10.66□□□□□ -0.7
SHPK-201ENST00000225519 ZFP36P26651 326 aaKnown RBP10.66□□□□□ -0.7
SHPK-201ENST00000225519 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 M0QXV9 152 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 EIF4EBP3O60516 100 aaPredicted RBP10.65□□□□□ -0.7
SHPK-201ENST00000225519 TRBV12-3P01733 135 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 Q6Q795 121 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 ZNF580Q9UK33 172 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 IGHV3OR16-10A0A075B7F0 116 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 UBE2E1P51965 193 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 TMEM95Q3KNT9 176 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 CLEC2BQ92478 149 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 LAMA5O15230 3695 aa10.65□□□□□ -0.7
SHPK-201ENST00000225519 TRAV8-3A0A0A6YYJ7 113 aa10.65□□□□□ -0.71
SHPK-201ENST00000225519 LINC00315P59091 139 aa10.64□□□□□ -0.71
SHPK-201ENST00000225519 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
SHPK-201ENST00000225519 CD28P10747 220 aa10.64□□□□□ -0.71
SHPK-201ENST00000225519 KIF25-AS1Q9Y6Z4 181 aa10.64□□□□□ -0.71
SHPK-201ENST00000225519 PRRC2AP48634 2157 aaKnown RBP10.64□□□□□ -0.71
SHPK-201ENST00000225519 ATMQ13315 3056 aa10.64□□□□□ -0.71
SHPK-201ENST00000225519 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
SHPK-201ENST00000225519 K7ENP7 123 aa10.64□□□□□ -0.71
SHPK-201ENST00000225519 PF4V1P10720 104 aa10.63□□□□□ -0.71
SHPK-201ENST00000225519 FAM110AQ9BQ89 295 aa10.63□□□□□ -0.71
SHPK-201ENST00000225519 RHPN1-AS1Q9BWJ2 59 aa10.63□□□□□ -0.71
SHPK-201ENST00000225519 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
SHPK-201ENST00000225519 UBTD1Q9HAC8 227 aa10.63□□□□□ -0.71
SHPK-201ENST00000225519 SETD2Q9BYW2 2564 aaPredicted RBP10.63□□□□□ -0.71
SHPK-201ENST00000225519 CCL21O00585 134 aa10.63□□□□□ -0.71
SHPK-201ENST00000225519 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
SHPK-201ENST00000225519 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
SHPK-201ENST00000225519 RNASE13Q5GAN3 156 aaKnown RBP10.62□□□□□ -0.71
SHPK-201ENST00000225519 H7C423 109 aa10.62□□□□□ -0.71
SHPK-201ENST00000225519 IGHV1-69P01742 117 aa10.62□□□□□ -0.71
SHPK-201ENST00000225519 NDUFA12Q9UI09 145 aa10.62□□□□□ -0.71
SHPK-201ENST00000225519 RHOHQ15669 191 aa10.62□□□□□ -0.71
SHPK-201ENST00000225519 Q8NA96 180 aa10.62□□□□□ -0.71
SHPK-201ENST00000225519 COL12A1Q99715 3063 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 HTN1P15515 57 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 ID1P41134 155 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 KLRB1Q12918 225 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 SPANXA1Q9NS26 97 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 H3BT86 120 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 NDUFA4O00483 81 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 Q6ZSV7 163 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 TRAV12-2A0A075B6T6 113 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 C20orf203Q8NBC4 194 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 TMEM101Q96IK0 257 aa10.61□□□□□ -0.71
SHPK-201ENST00000225519 USP9XQ93008 2570 aaPredicted RBP10.6□□□□□ -0.71
SHPK-201ENST00000225519 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
SHPK-201ENST00000225519 CFAP46Q8IYW2 2715 aa10.6□□□□□ -0.71
SHPK-201ENST00000225519 I3L3M4 83 aa10.6□□□□□ -0.71
SHPK-201ENST00000225519 SIRPDQ9H106 197 aa10.6□□□□□ -0.71
SHPK-201ENST00000225519 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
SHPK-201ENST00000225519 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
SHPK-201ENST00000225519 IGHV3-73A0A0B4J1V6 119 aa10.59□□□□□ -0.71
SHPK-201ENST00000225519 NXPH4O95158 308 aa10.59□□□□□ -0.71
SHPK-201ENST00000225519 LY6EQ16553 131 aa10.59□□□□□ -0.71
SHPK-201ENST00000225519 C5orf56Q8N8D9 126 aa10.59□□□□□ -0.71
SHPK-201ENST00000225519 KLK9Q9UKQ9 250 aa10.59□□□□□ -0.71
SHPK-201ENST00000225519 FAM236AA0A1B0GUQ0 79 aa10.58□□□□□ -0.72
SHPK-201ENST00000225519 FAM236BA0A1B0GV22 79 aa10.58□□□□□ -0.72
SHPK-201ENST00000225519 DOPEY1Q5JWR5 2465 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms