RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Foxa2P35583 459 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ccl11P48298 97 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Col9a3A2ACT7 680 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 F12Q80YC5 597 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 P01637 128 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 St6galnac2P70277 373 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Zfp959Q91VM8 539 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Dusp14Q9JLY7 198 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 MscO88940 201 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Fam219bQ14DQ1 197 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Fbln7Q501P1 440 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Paqr4Q9JJE4 273 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 P2ry6Q9ERK9 328 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ighv1-67A0A0G2JFN9 117 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Trdv2-1A0A0G2JGB9 116 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm4788E9Q8B5 879 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 P01654 111 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 P01656 111 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 P03977 111 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Nkain3Q3URJ8 181 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ca11O70354 328 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Cks1bP61025 79 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 RflnaQ7TS73 204 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Rnase2aQ8K196 155 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 GgactQ923B0 149 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Spata45Q9CVW4 97 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm5089A1L3C8 106 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 P06344 263 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Igfbp3P47878 292 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Cd99Q8VCN6 175 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Shisa6Q3UH99 525 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Defb6Q91VD6 63 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Sft2d3Q9CSV6 209 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 MymxQ2Q5T5 84 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr1419Q7TQS2 343 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Dkk2Q9QYZ8 259 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Dnase2P56542 353 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Sptan1P16546 2472 aaKnown RBP10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm867A0A1W2P7T4 151 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Il12rb1Q60837 738 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm20854Q62461 227 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Tmem158Q6F5E0 286 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Psg22Q810J1 475 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Slc35e4Q8K3D6 351 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Cryba2Q9JJV1 197 aa10.13□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm35549A0A0N4SUS7 141 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 H2-M10.4Q85ZW8 331 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 H2afb1Q9CQ70 111 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Tmem50aQ9CXL1 157 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 SisF8VQM5 1818 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr779E9PUS9 130 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Arpc1aQ9R0Q6 370 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr364-ps1A0A140T8Q2 307 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Itgb4A2A863 1818 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ighv5-16A0A0B4J1P4 117 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Umad1E0CX23 159 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 P04212 136 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Znf329Q6GQR8 522 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 RetnlgQ8K426 117 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Rnase6Q9D244 153 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 HrkP62816 92 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr33Q8VGX7 318 aa10.12□□□□□ -0.79
Trim56-201ENSMUST00000054384 Fam241aQ9CZL2 131 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Lipt2Q9D009 231 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Osr1Q9WVG7 266 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 P01629 112 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ripply2Q2WG76 128 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Plppr1Q8BFZ2 325 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr523Q8VFE7 317 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 CompQ9R0G6 755 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Nup210lQ9D2F7 1881 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Sdr39u1Q5M8N4 308 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr139Q60891 315 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr810Q8VFH9 312 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Arfgef3Q3UGY8 2170 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Il9P15247 144 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Trav3-1Q5R1I8 114 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Q8BG31 207 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Immp2lQ8BPT6 175 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Tusc5Q8C838 173 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Q9D727 114 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 PspnO70300 156 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Igh-3P01867 404 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Defb4P82019 63 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Foxb2Q64733 428 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Rbfox3Q8BIF2 374 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm21983D6RFS9 131 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Cep295Q8BQ48 2412 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Igkv4-50A0A0B4J1J0 117 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Arhgef17Q80U35 2057 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Col6a6Q8C6K9 2265 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Trav6n-5A0A075B621 112 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Trav6-5A0A075B6B5 112 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 PlnP61014 52 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Nhlrc1Q8BR37 401 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 Prr15Q9D1T5 122 aa10.11□□□□□ -0.79
Trim56-201ENSMUST00000054384 AgmatA2AS89 358 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Zfp27P10077 819 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Tnfrsf9P20334 256 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Prima1Q810F0 153 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms