RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TOMM6Q96B49 74 aa12.54□□□□□ -0.4
PHGDH-229ENST00000641891 SORL1Q92673 2214 aa12.54□□□□□ -0.4
PHGDH-229ENST00000641891 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
PHGDH-229ENST00000641891 ORAOV1Q8WV07 137 aa12.54□□□□□ -0.4
PHGDH-229ENST00000641891 F5H697 171 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-229ENST00000641891 TAX1BP3O14907 124 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 SCGB3A1Q96QR1 104 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 ESM1Q9NQ30 184 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 A0A087WX48 190 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 ZC2HC1BQ5TFG8 222 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 TLN2Q9Y4G6 2542 aa12.53□□□□□ -0.4
PHGDH-229ENST00000641891 RBMY1BA6NDE4 496 aaKnown RBP12.52□□□□□ -0.4
PHGDH-229ENST00000641891 RBMY1EA6NEQ0 496 aaKnown RBP12.52□□□□□ -0.4
PHGDH-229ENST00000641891 RBMY1DP0C7P1 496 aaKnown RBP12.52□□□□□ -0.4
PHGDH-229ENST00000641891 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.4
PHGDH-229ENST00000641891 TMEM86BQ8N661 226 aa12.52□□□□□ -0.4
PHGDH-229ENST00000641891 TMEM97Q5BJF2 176 aa12.52□□□□□ -0.41
PHGDH-229ENST00000641891 PEMTQ9UBM1 199 aa12.52□□□□□ -0.41
PHGDH-229ENST00000641891 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 PPP1R17O96001 155 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 PRM2P04554 102 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 HTN1P15515 57 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 SONP18583 2426 aaKnown RBP12.5□□□□□ -0.41
PHGDH-229ENST00000641891 CBY3A6NI87 242 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 PLA2G2AP14555 144 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 FOSL1P15407 271 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 KRTAP1-1Q07627 177 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 DYNLRB2Q8TF09 96 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
PHGDH-229ENST00000641891 H3BMM0 161 aa12.49□□□□□ -0.41
PHGDH-229ENST00000641891 K7EMI3 77 aa12.49□□□□□ -0.41
PHGDH-229ENST00000641891 CRYGDP07320 174 aa12.49□□□□□ -0.41
PHGDH-229ENST00000641891 ZNF56Q15929 161 aa12.49□□□□□ -0.41
PHGDH-229ENST00000641891 SYT8Q8NBV8 401 aa12.49□□□□□ -0.41
PHGDH-229ENST00000641891 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
PHGDH-229ENST00000641891 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
PHGDH-229ENST00000641891 NEXN-AS1Q8NBZ9 246 aa12.49□□□□□ -0.41
PHGDH-229ENST00000641891 BAALCQ8WXS3 180 aa12.49□□□□□ -0.41
PHGDH-229ENST00000641891 PDZD2O15018 2839 aa12.48□□□□□ -0.41
PHGDH-229ENST00000641891 TRAV12-1A0A0B4J245 112 aa12.48□□□□□ -0.41
PHGDH-229ENST00000641891 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
PHGDH-229ENST00000641891 H7C1H1 209 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 SIVA1O15304 175 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 CCL25O15444 150 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 CD300EQ496F6 205 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-229ENST00000641891 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 CHTOPQ9Y3Y2 248 aaKnown RBP12.47□□□□□ -0.41
PHGDH-229ENST00000641891 FLNAP21333 2647 aaKnown RBP12.47□□□□□ -0.41
PHGDH-229ENST00000641891 SDHAF1A6NFY7 115 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 F8VRH5 84 aa12.47□□□□□ -0.41
PHGDH-229ENST00000641891 MYO9AB2RTY4 2548 aa12.46□□□□□ -0.41
PHGDH-229ENST00000641891 A8MTW9 85 aa12.46□□□□□ -0.41
PHGDH-229ENST00000641891 CD28P10747 220 aa12.46□□□□□ -0.41
PHGDH-229ENST00000641891 PLNP26678 52 aa12.46□□□□□ -0.41
PHGDH-229ENST00000641891 RPL32P62910 135 aaKnown RBP12.46□□□□□ -0.41
PHGDH-229ENST00000641891 HSD52Q0P140 79 aa12.46□□□□□ -0.41
PHGDH-229ENST00000641891 ZFP2Q6ZN57 461 aa12.46□□□□□ -0.41
PHGDH-229ENST00000641891 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.41
PHGDH-229ENST00000641891 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.42
PHGDH-229ENST00000641891 M0QY20 66 aa12.46□□□□□ -0.42
PHGDH-229ENST00000641891 RPL39P62891 51 aaKnown RBP12.46□□□□□ -0.42
PHGDH-229ENST00000641891 MAPKAPK5-AS1Q8N8E1 139 aa12.46□□□□□ -0.42
PHGDH-229ENST00000641891 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.42
PHGDH-229ENST00000641891 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.42
PHGDH-229ENST00000641891 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 PTTG1IPP53801 180 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 TEX29Q8N6K0 151 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 ZNF256Q9Y2P7 627 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-229ENST00000641891 CHD6Q8TD26 2715 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 J3QKU1 62 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 VCYO14598 125 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 TSHBP01222 138 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 SEC11AP67812 179 aa12.45□□□□□ -0.42
PHGDH-229ENST00000641891 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
PHGDH-229ENST00000641891 PRSS29PA6NIE9 313 aa12.44□□□□□ -0.42
PHGDH-229ENST00000641891 UBE2V1Q13404 147 aa12.44□□□□□ -0.42
PHGDH-229ENST00000641891 VAMP3Q15836 100 aa12.44□□□□□ -0.42
PHGDH-229ENST00000641891 CYSLTR1Q9Y271 337 aa12.44□□□□□ -0.42
PHGDH-229ENST00000641891 TRBV6-5A0A0K0K1A5 114 aa12.43□□□□□ -0.42
PHGDH-229ENST00000641891 KIR2DL4Q99706 377 aa12.43□□□□□ -0.42
PHGDH-229ENST00000641891 TRBV25-1A0A075B6N4 114 aa12.43□□□□□ -0.42
PHGDH-229ENST00000641891 IGHV3-73A0A0B4J1V6 119 aa12.43□□□□□ -0.42
PHGDH-229ENST00000641891 TRBV27A0A0K0K1C4 114 aa12.43□□□□□ -0.42
PHGDH-229ENST00000641891 CHAC1Q9BUX1 264 aa12.42□□□□□ -0.42
PHGDH-229ENST00000641891 IGIPA6NJ69 53 aa12.42□□□□□ -0.42
PHGDH-229ENST00000641891 K7EP13 123 aa12.42□□□□□ -0.42
PHGDH-229ENST00000641891 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-229ENST00000641891 CCL24O00175 119 aa12.41□□□□□ -0.42
PHGDH-229ENST00000641891 PROK1P58294 105 aa12.41□□□□□ -0.42
PHGDH-229ENST00000641891 FHL3Q13643 280 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 TRPT1Q86TN4 253 aaKnown RBP12.4□□□□□ -0.42
PHGDH-229ENST00000641891 HIGD1BQ9P298 99 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 NF1P21359 2839 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 P0DMU3 169 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 FAM231AP0DMU4 169 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 205.7 ms