RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ZNF876PQ49A33 203 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 C12orf54Q6X4T0 127 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 KIR2DL5AQ8N109 375 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 C14orf178Q8N769 122 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-215ENST00000641371 C3orf56Q8N813 242 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 KIR2DL5BQ8NHK3 375 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 C16orf74Q96GX8 76 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 MDFICQ9P1T7 246 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 XCL2Q9UBD3 114 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 KIF25-AS1Q9Y6Z4 181 aa7.11□□□□□ -1.27
PHGDH-215ENST00000641371 IGHV1-24A0A0C4DH33 117 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 TRBV6-5A0A0K0K1A5 114 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 SCGB1D1O95968 90 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 MGPP08493 103 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 RBMY1A1P0DJD3 496 aaKnown RBP7.1□□□□□ -1.27
PHGDH-215ENST00000641371 RBMY1CP0DJD4 496 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 BTF3P20290 206 aaKnown RBP7.1□□□□□ -1.27
PHGDH-215ENST00000641371 IFI27P40305 119 aaPredicted RBP7.1□□□□□ -1.27
PHGDH-215ENST00000641371 SUMO2P61956 95 aaKnown RBP7.1□□□□□ -1.27
PHGDH-215ENST00000641371 RBMY1FQ15415 496 aaKnown RBP7.1□□□□□ -1.27
PHGDH-215ENST00000641371 KRTAP24-1Q3LI83 254 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 ORMDL2Q53FV1 153 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 Q6ZWC4 215 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 NRACQ8N912 160 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 URB1-AS1Q96HZ7 61 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 SMIM2Q9BVW6 85 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 MAP1LC3CQ9BXW4 147 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 CSTL1Q9H114 145 aa7.1□□□□□ -1.27
PHGDH-215ENST00000641371 SMIM9A6NGZ8 99 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 NCR2O95944 276 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 APOC4P55056 127 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 KRTDAPP60985 99 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 DAZ2Q13117 558 aaKnown RBP7.09□□□□□ -1.27
PHGDH-215ENST00000641371 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 ZFP2Q6ZN57 461 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 FAM19A2Q8N3H0 131 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 RASL10AQ92737 203 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 TMEM70Q9BUB7 260 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 ST20Q9HBF5 79 aa7.09□□□□□ -1.27
PHGDH-215ENST00000641371 LOC389332A0A1B0GUA5 103 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 F5H697 171 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 SMKR1H3BMG3 65 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 ATP5LO75964 103 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 FCER1GP30273 86 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 LINC00315P59091 139 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 LAGE3Q14657 143 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 ZNF56Q15929 161 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 RRN3P1Q2M238 152 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 KRTAP21-3Q3LHN1 58 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 SPATA12Q7Z6I5 190 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 IL17DQ8TAD2 202 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 RNASE8Q8TDE3 154 aaKnown RBP7.08□□□□□ -1.28
PHGDH-215ENST00000641371 KIR2DL4Q99706 377 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 JMJD1CQ15652 2540 aa7.08□□□□□ -1.28
PHGDH-215ENST00000641371 IGLV2-18A0A075B6J9 118 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 TSTD3H0UI37 97 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 VCYO14598 125 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 CRYGDP07320 174 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 C3orf79P0CE67 100 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 HTN1P15515 57 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 PRR31Q5SQ13 230 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 ZNF705AQ6ZN79 300 aaPredicted RBP7.07□□□□□ -1.28
PHGDH-215ENST00000641371 DNAJC30Q96LL9 226 aa7.07□□□□□ -1.28
PHGDH-215ENST00000641371 RS1O15537 224 aa7.06□□□□□ -1.28
PHGDH-215ENST00000641371 RPL35AP18077 110 aaKnown RBP7.06□□□□□ -1.28
PHGDH-215ENST00000641371 TEX43Q6ZNM6 134 aa7.06□□□□□ -1.28
PHGDH-215ENST00000641371 CSNK1G2-AS1Q8NCQ2 148 aa7.06□□□□□ -1.28
PHGDH-215ENST00000641371 ATRQ13535 2644 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 A0A087WWL8 130 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 SYS1-DBNDD2H3BUS1 97 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 M0QY20 66 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 GIG44P09565 113 aaPredicted RBP7.05□□□□□ -1.28
PHGDH-215ENST00000641371 PKIAP61925 76 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 RHOHQ15669 191 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 FAM74A4Q5TZK3 123 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 OVOL2Q9BRP0 275 aa7.05□□□□□ -1.28
PHGDH-215ENST00000641371 IGHV3OR16-12A0A075B7B8 117 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 TRBV10-1A0A0K0K1A3 114 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 TRBV27A0A0K0K1C4 114 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 NUDT3O95989 172 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 IGHV3-53P01767 116 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 GATA1P15976 413 aaPredicted RBP7.04□□□□□ -1.28
PHGDH-215ENST00000641371 AZU1P20160 251 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
PHGDH-215ENST00000641371 CFAP126Q5VTH2 177 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 IFI27L1Q96BM0 104 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 VAMP8Q9BV40 100 aa7.04□□□□□ -1.28
PHGDH-215ENST00000641371 NIPBLQ6KC79 2804 aaeCLIP7.03□□□□□ -1.28
PHGDH-215ENST00000641371 TRGV1A0A0A0MS02 117 aa7.03□□□□□ -1.28
PHGDH-215ENST00000641371 SDHAF1A6NFY7 115 aa7.03□□□□□ -1.28
PHGDH-215ENST00000641371 A8MZ25 164 aa7.03□□□□□ -1.28
PHGDH-215ENST00000641371 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
PHGDH-215ENST00000641371 SPRY2O43597 315 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms