RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PPP1R17O96001 155 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 ZNF688P0C7X2 276 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 LEPP41159 167 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 MUC21Q5SSG8 566 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 SPANXN1Q5VSR9 72 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 C2orf91Q6ZV80 131 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 NRACQ8N912 160 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 IGLV1-51P01701 117 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 TIMM8BQ9Y5J9 83 aaPredicted RBP8.68□□□□□ -1.02
VRK3-223ENST00000601341 M0R381 172 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 EVI2AP22794 236 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 INSL3P51460 131 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 LAGE3Q14657 143 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 ODF1Q14990 250 aa8.68□□□□□ -1.02
VRK3-223ENST00000601341 MCRIP2Q9BUT9 160 aaKnown RBP8.68□□□□□ -1.02
VRK3-223ENST00000601341 LINC01549A6NIU2 74 aa8.67□□□□□ -1.02
VRK3-223ENST00000601341 TAX1BP3O14907 124 aa8.67□□□□□ -1.02
VRK3-223ENST00000601341 ASIPP42127 132 aa8.67□□□□□ -1.02
VRK3-223ENST00000601341 TMEM97Q5BJF2 176 aa8.67□□□□□ -1.02
VRK3-223ENST00000601341 ODF3Q96PU9 254 aa8.67□□□□□ -1.02
VRK3-223ENST00000601341 NXPH4O95158 308 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 HSD52Q0P140 79 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 POM121L12Q8N7R1 296 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 WFDC9Q8NEX5 89 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 DPH3P1Q9H4G8 78 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 HIGD1BQ9P298 99 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 ZNF256Q9Y2P7 627 aaPredicted RBP8.66□□□□□ -1.02
VRK3-223ENST00000601341 A6NDN8 102 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 F6UB75 175 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 DEFB1P60022 68 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 RPL32P62910 135 aaKnown RBP8.66□□□□□ -1.02
VRK3-223ENST00000601341 ORMDL2Q53FV1 153 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 PRR9Q5T870 116 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 C9orf66Q5T8R8 295 aa8.66□□□□□ -1.02
VRK3-223ENST00000601341 COL6A5A8TX70 2615 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 KLLNB2CW77 178 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 H3BVH4 76 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 CCL25O15444 150 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 IGKCP01834 107 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 SMIM17P0DL12 118 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 DEFB131AP59861 70 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 FOXI2Q6ZQN5 318 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
VRK3-223ENST00000601341 A0A0J9YX75 114 aa8.64□□□□□ -1.03
VRK3-223ENST00000601341 DPM2O94777 84 aa8.64□□□□□ -1.03
VRK3-223ENST00000601341 DUSP14O95147 198 aaKnown RBP8.64□□□□□ -1.03
VRK3-223ENST00000601341 GAS8-AS1O95177 125 aa8.64□□□□□ -1.03
VRK3-223ENST00000601341 PRSS1P07477 247 aa8.64□□□□□ -1.03
VRK3-223ENST00000601341 S100A4P26447 101 aaKnown RBP8.64□□□□□ -1.03
VRK3-223ENST00000601341 CMC4P56277 68 aaPredicted RBP8.64□□□□□ -1.03
VRK3-223ENST00000601341 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
VRK3-223ENST00000601341 K7EP13 123 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 PLNP26678 52 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 PHLDA3Q9Y5J5 127 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 STAB1Q9NY15 2570 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 GATA1P15976 413 aaPredicted RBP8.63□□□□□ -1.03
VRK3-223ENST00000601341 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
VRK3-223ENST00000601341 BEAN1Q3B7T3 259 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 SPATA3Q8NHX4 192 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 DKK2Q9UBU2 259 aa8.63□□□□□ -1.03
VRK3-223ENST00000601341 VWFP04275 2813 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 A0A087WX48 190 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 OR11H12B2RN74 326 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 H3BRM9 83 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 FXYD7P58549 80 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 VAMP3Q15836 100 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 ODF3L2Q3SX64 289 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 FAM110AQ9BQ89 295 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 TP73-AS1Q9UF72 201 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 SORL1Q92673 2214 aa8.62□□□□□ -1.03
VRK3-223ENST00000601341 C7orf71A4D174 169 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.61□□□□□ -1.03
VRK3-223ENST00000601341 RIPPLY3P57055 190 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 C18orf15Q96N68 181 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 NOTCH3Q9UM47 2321 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 CBY3A6NI87 242 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 H3BMM0 161 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 RNASE3P12724 160 aaKnown RBP8.61□□□□□ -1.03
VRK3-223ENST00000601341 OR4C5Q8NGB2 326 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 RASL10AQ92737 203 aa8.61□□□□□ -1.03
VRK3-223ENST00000601341 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
VRK3-223ENST00000601341 RNASE4P34096 147 aaKnown RBP8.6□□□□□ -1.03
VRK3-223ENST00000601341 NMUP48645 174 aa8.6□□□□□ -1.03
VRK3-223ENST00000601341 TRAV26-2A0A0B4J265 109 aa8.59□□□□□ -1.03
VRK3-223ENST00000601341 A8MTW9 85 aa8.59□□□□□ -1.03
VRK3-223ENST00000601341 H7C1H1 209 aa8.59□□□□□ -1.03
VRK3-223ENST00000601341 WIPF1O43516 503 aa8.59□□□□□ -1.03
VRK3-223ENST00000601341 CD7P09564 240 aa8.59□□□□□ -1.03
VRK3-223ENST00000601341 TAL2Q16559 108 aa8.59□□□□□ -1.03
VRK3-223ENST00000601341 FAM159AQ6UWV7 190 aa8.59□□□□□ -1.03
VRK3-223ENST00000601341 Q6ZQT7 251 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms