RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 TEX46H3BTG2 121 aa11.94□□□□□ -0.5
TPM4-206ENST00000587201 CCL20P78556 96 aa11.94□□□□□ -0.5
TPM4-206ENST00000587201 RPL19P84098 196 aaKnown RBP11.94□□□□□ -0.5
TPM4-206ENST00000587201 MLST8Q9BVC4 326 aa11.94□□□□□ -0.5
TPM4-206ENST00000587201 TRAV1-1A0A0B4J248 108 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 LINC00694P0DN24 101 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 SULT1A2P50226 295 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 PRR27Q6MZM9 219 aa11.93□□□□□ -0.5
TPM4-206ENST00000587201 A0A087WTM6 91 aa11.92□□□□□ -0.5
TPM4-206ENST00000587201 RPL35P42766 123 aaKnown RBP11.92□□□□□ -0.5
TPM4-206ENST00000587201 PGPEP1Q9NXJ5 209 aa11.92□□□□□ -0.5
TPM4-206ENST00000587201 Q9UF83 564 aa11.92□□□□□ -0.5
TPM4-206ENST00000587201 IBA57-AS1B1ANH7 110 aa11.91□□□□□ -0.5
TPM4-206ENST00000587201 PSCAO43653 123 aa11.91□□□□□ -0.5
TPM4-206ENST00000587201 C1QBP02746 253 aa11.91□□□□□ -0.5
TPM4-206ENST00000587201 CXCL1P09341 107 aa11.91□□□□□ -0.5
TPM4-206ENST00000587201 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM4-206ENST00000587201 Q6ZNX1 250 aa11.91□□□□□ -0.5
TPM4-206ENST00000587201 HSPG2P98160 4391 aa11.9□□□□□ -0.5
TPM4-206ENST00000587201 SLC51BQ86UW2 128 aa11.9□□□□□ -0.5
TPM4-206ENST00000587201 C11orf52Q96A22 123 aa11.9□□□□□ -0.5
TPM4-206ENST00000587201 DERL1Q9BUN8 251 aa11.9□□□□□ -0.5
TPM4-206ENST00000587201 Q9HAA7 133 aa11.9□□□□□ -0.5
TPM4-206ENST00000587201 MAPKAPK5-AS1Q8N8E1 139 aa11.89□□□□□ -0.51
TPM4-206ENST00000587201 OR10AG1Q8NH19 301 aa11.89□□□□□ -0.51
TPM4-206ENST00000587201 PCLOQ9Y6V0 5065 aa11.88□□□□□ -0.51
TPM4-206ENST00000587201 A0A087WWC5 75 aa11.88□□□□□ -0.51
TPM4-206ENST00000587201 IFNA1P01562 189 aa11.88□□□□□ -0.51
TPM4-206ENST00000587201 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
TPM4-206ENST00000587201 CDPF1Q6NVV7 123 aa11.88□□□□□ -0.51
TPM4-206ENST00000587201 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
TPM4-206ENST00000587201 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
TPM4-206ENST00000587201 SNAI2O43623 268 aa11.87□□□□□ -0.51
TPM4-206ENST00000587201 SPANXN1Q5VSR9 72 aa11.87□□□□□ -0.51
TPM4-206ENST00000587201 AKAP14Q86UN6 197 aa11.87□□□□□ -0.51
TPM4-206ENST00000587201 APOBP04114 4563 aaKnown RBP11.87□□□□□ -0.51
TPM4-206ENST00000587201 hCG_2014768A0A024R1R8 64 aa11.86□□□□□ -0.51
TPM4-206ENST00000587201 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
TPM4-206ENST00000587201 OR5AL1P0C617 328 aa11.86□□□□□ -0.51
TPM4-206ENST00000587201 SSTP61278 116 aa11.86□□□□□ -0.51
TPM4-206ENST00000587201 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
TPM4-206ENST00000587201 MEF2BQ02080 365 aaPredicted RBP11.86□□□□□ -0.51
TPM4-206ENST00000587201 ZNF56Q15929 161 aa11.86□□□□□ -0.51
TPM4-206ENST00000587201 Q8N3U1 123 aa11.86□□□□□ -0.51
TPM4-206ENST00000587201 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
TPM4-206ENST00000587201 DAZAP1Q96EP5 407 aaKnown RBP11.86□□□□□ -0.51
TPM4-206ENST00000587201 SSBP4Q9BWG4 385 aaPredicted RBP11.86□□□□□ -0.51
TPM4-206ENST00000587201 RAB19A4D1S5 217 aa11.85□□□□□ -0.51
TPM4-206ENST00000587201 PDE6DO43924 150 aa11.85□□□□□ -0.51
TPM4-206ENST00000587201 LAGE3Q14657 143 aa11.85□□□□□ -0.51
TPM4-206ENST00000587201 KRTAP4-5Q9BYR2 181 aa11.85□□□□□ -0.51
TPM4-206ENST00000587201 MED9Q9NWA0 146 aa11.85□□□□□ -0.51
TPM4-206ENST00000587201 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
TPM4-206ENST00000587201 BCL2P10415 239 aa11.84□□□□□ -0.51
TPM4-206ENST00000587201 GNG4P50150 75 aa11.84□□□□□ -0.51
TPM4-206ENST00000587201 RAB4BP61018 213 aa11.84□□□□□ -0.51
TPM4-206ENST00000587201 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
TPM4-206ENST00000587201 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
TPM4-206ENST00000587201 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 LRCOL1A6NCL2 159 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 UBE2D3P61077 147 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 UBE2D2P62837 147 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 C9orf62Q8N4C0 152 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 SMIM12Q96EX1 92 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 URGCP-MRPS24S4R325 110 aa11.83□□□□□ -0.52
TPM4-206ENST00000587201 ABCA13Q86UQ4 5058 aa11.82□□□□□ -0.52
TPM4-206ENST00000587201 RPS20P60866 119 aaKnown RBP11.82□□□□□ -0.52
TPM4-206ENST00000587201 TOR2AQ5JU69 321 aa11.82□□□□□ -0.52
TPM4-206ENST00000587201 OR2D3Q8NGH3 330 aa11.82□□□□□ -0.52
TPM4-206ENST00000587201 TPPP3Q9BW30 176 aa11.82□□□□□ -0.52
TPM4-206ENST00000587201 TRAV8-3A0A0A6YYJ7 113 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 F5H697 171 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 SMIM17P0DL12 118 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 GZMBP10144 247 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
TPM4-206ENST00000587201 NIT1Q86X76 327 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 Q8N1X5 172 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 NEXN-AS1Q8NBZ9 246 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
TPM4-206ENST00000587201 RBFOX3A6NFN3 312 aa11.8□□□□□ -0.52
TPM4-206ENST00000587201 P01737 135 aa11.8□□□□□ -0.52
TPM4-206ENST00000587201 KCNIP4Q6PIL6 250 aa11.8□□□□□ -0.52
TPM4-206ENST00000587201 FER1L6-AS1Q8NA97 138 aa11.8□□□□□ -0.52
TPM4-206ENST00000587201 AP1S3Q96PC3 154 aa11.8□□□□□ -0.52
TPM4-206ENST00000587201 BIN3Q9NQY0 253 aa11.8□□□□□ -0.52
TPM4-206ENST00000587201 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
TPM4-206ENST00000587201 IGLV5-52A0A0A0MRZ9 124 aa11.79□□□□□ -0.52
TPM4-206ENST00000587201 XKRY2A2RUG3 117 aa11.79□□□□□ -0.52
TPM4-206ENST00000587201 IGLC6P0CF74 106 aa11.79□□□□□ -0.52
TPM4-206ENST00000587201 GCSHP23434 173 aa11.79□□□□□ -0.52
TPM4-206ENST00000587201 KRTAP10-1P60331 282 aa11.79□□□□□ -0.52
TPM4-206ENST00000587201 Q8N814 137 aa11.79□□□□□ -0.52
TPM4-206ENST00000587201 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms