RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 DPH3P1Q9H4G8 78 aa11.49□□□□□ -0.57
SS18-226ENST00000585241 JPT2Q9H910 190 aa11.49□□□□□ -0.57
SS18-226ENST00000585241 PRKDCP78527 4128 aaKnown RBP11.49□□□□□ -0.57
SS18-226ENST00000585241 TRAV4A0A0B4J268 109 aa11.48□□□□□ -0.57
SS18-226ENST00000585241 CFAP126Q5VTH2 177 aa11.48□□□□□ -0.57
SS18-226ENST00000585241 FAM104BQ5XKR9 115 aa11.48□□□□□ -0.57
SS18-226ENST00000585241 CELA1Q9UNI1 258 aa11.48□□□□□ -0.57
SS18-226ENST00000585241 NACAE9PAV3 2078 aa11.48□□□□□ -0.57
SS18-226ENST00000585241 GAGE12BA1L429 117 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 RHODO00212 210 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 CIDEAO60543 219 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 GAGE7O76087 117 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 GAGE12FP0CL80 117 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 GAGE12GP0CL81 117 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 GAGE12IP0CL82 117 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 SPART-AS1P0CW21 52 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 ZFP2Q6ZN57 461 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 C14orf178Q8N769 122 aaPredicted RBP11.47□□□□□ -0.57
SS18-226ENST00000585241 RNF185Q96GF1 192 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 SAMD10Q9BYL1 202 aa11.47□□□□□ -0.57
SS18-226ENST00000585241 A0A0J9YWU9 116 aa11.46□□□□□ -0.57
SS18-226ENST00000585241 RAB4BP61018 213 aa11.46□□□□□ -0.57
SS18-226ENST00000585241 AMN1Q8IY45 258 aa11.46□□□□□ -0.57
SS18-226ENST00000585241 FRZBQ92765 325 aa11.46□□□□□ -0.57
SS18-226ENST00000585241 A0A087WWL8 130 aa11.45□□□□□ -0.58
SS18-226ENST00000585241 SMIM17P0DL12 118 aa11.45□□□□□ -0.58
SS18-226ENST00000585241 RAB4AP20338 218 aa11.45□□□□□ -0.58
SS18-226ENST00000585241 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
SS18-226ENST00000585241 SLAQ13239 276 aa11.45□□□□□ -0.58
SS18-226ENST00000585241 TRAPPC1Q9Y5R8 145 aa11.45□□□□□ -0.58
SS18-226ENST00000585241 TRGV2A0A075B6R0 118 aa11.44□□□□□ -0.58
SS18-226ENST00000585241 PHOX2AO14813 284 aa11.44□□□□□ -0.58
SS18-226ENST00000585241 DEFB130BP0DP73 79 aa11.44□□□□□ -0.58
SS18-226ENST00000585241 DEFB130AP0DP74 79 aa11.44□□□□□ -0.58
SS18-226ENST00000585241 OR4C5Q8NGB2 326 aa11.44□□□□□ -0.58
SS18-226ENST00000585241 ZNF479Q96JC4 524 aa11.44□□□□□ -0.58
SS18-226ENST00000585241 MRPL18Q9H0U6 180 aaKnown RBP11.44□□□□□ -0.58
SS18-226ENST00000585241 EDA2RQ9HAV5 297 aa11.44□□□□□ -0.58
SS18-226ENST00000585241 APCSP02743 223 aa11.43□□□□□ -0.58
SS18-226ENST00000585241 DAD1P61803 113 aa11.43□□□□□ -0.58
SS18-226ENST00000585241 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
SS18-226ENST00000585241 FAM74A4Q5TZK3 123 aa11.43□□□□□ -0.58
SS18-226ENST00000585241 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
SS18-226ENST00000585241 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.42□□□□□ -0.58
SS18-226ENST00000585241 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
SS18-226ENST00000585241 U3KQK5 164 aa11.42□□□□□ -0.58
SS18-226ENST00000585241 IGHV3-53P01767 116 aa11.41□□□□□ -0.58
SS18-226ENST00000585241 TRGC2P03986 189 aa11.41□□□□□ -0.58
SS18-226ENST00000585241 MGPP08493 103 aa11.41□□□□□ -0.58
SS18-226ENST00000585241 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
SS18-226ENST00000585241 SUMO4Q6EEV6 95 aa11.41□□□□□ -0.58
SS18-226ENST00000585241 FBN3Q75N90 2809 aa11.4□□□□□ -0.58
SS18-226ENST00000585241 PPBPP02775 128 aa11.4□□□□□ -0.58
SS18-226ENST00000585241 FHL2Q14192 279 aa11.4□□□□□ -0.58
SS18-226ENST00000585241 ZNF56Q15929 161 aa11.4□□□□□ -0.58
SS18-226ENST00000585241 IGHV3-73A0A0B4J1V6 119 aa11.39□□□□□ -0.59
SS18-226ENST00000585241 M0QY20 66 aa11.39□□□□□ -0.59
SS18-226ENST00000585241 ATP5G1P05496 136 aa11.39□□□□□ -0.59
SS18-226ENST00000585241 GATA1P15976 413 aaPredicted RBP11.39□□□□□ -0.59
SS18-226ENST00000585241 Q6ZSN1 163 aa11.39□□□□□ -0.59
SS18-226ENST00000585241 C11orf45Q8TAV5 145 aa11.39□□□□□ -0.59
SS18-226ENST00000585241 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
SS18-226ENST00000585241 D6R8Y8 96 aa11.38□□□□□ -0.59
SS18-226ENST00000585241 KIAA1644Q3SXP7 199 aa11.38□□□□□ -0.59
SS18-226ENST00000585241 ORMDL3Q8N138 153 aa11.38□□□□□ -0.59
SS18-226ENST00000585241 ALKBH7Q9BT30 221 aaPredicted RBP11.38□□□□□ -0.59
SS18-226ENST00000585241 LAMTOR2Q9Y2Q5 125 aa11.38□□□□□ -0.59
SS18-226ENST00000585241 TRAV26-2A0A0B4J265 109 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 TRBV6-4A0A1B0GX49 114 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 F5H697 171 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 H7C1H1 209 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 GAS8-AS1O95177 125 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 HOXA5P20719 270 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 CKS2P33552 79 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 NRACQ8N912 160 aa11.37□□□□□ -0.59
SS18-226ENST00000585241 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
SS18-226ENST00000585241 TRGV4A0A0C4DH28 118 aa11.36□□□□□ -0.59
SS18-226ENST00000585241 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
SS18-226ENST00000585241 NCR2O95944 276 aa11.36□□□□□ -0.59
SS18-226ENST00000585241 Q6ZTC4 211 aa11.36□□□□□ -0.59
SS18-226ENST00000585241 TRBV10-1A0A0K0K1A3 114 aa11.35□□□□□ -0.59
SS18-226ENST00000585241 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
SS18-226ENST00000585241 K7EQD1 137 aa11.35□□□□□ -0.59
SS18-226ENST00000585241 PPP1R17O96001 155 aa11.35□□□□□ -0.59
SS18-226ENST00000585241 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
SS18-226ENST00000585241 SLC25A29Q8N8R3 303 aa11.35□□□□□ -0.59
SS18-226ENST00000585241 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
SS18-226ENST00000585241 PRO0255Q9UI72 69 aa11.35□□□□□ -0.59
SS18-226ENST00000585241 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
SS18-226ENST00000585241 NPYP01303 97 aa11.34□□□□□ -0.59
SS18-226ENST00000585241 SRIP30626 198 aa11.34□□□□□ -0.59
SS18-226ENST00000585241 CRYBA4P53673 196 aa11.34□□□□□ -0.59
SS18-226ENST00000585241 RHOHQ15669 191 aa11.34□□□□□ -0.59
SS18-226ENST00000585241 PRSS47A8MTI9 375 aa11.33□□□□□ -0.6
SS18-226ENST00000585241 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
SS18-226ENST00000585241 NEXN-AS1Q8NBZ9 246 aa11.33□□□□□ -0.6
SS18-226ENST00000585241 RPL39LQ96EH5 51 aaKnown RBP11.33□□□□□ -0.6
SS18-226ENST00000585241 DNAJC30Q96LL9 226 aa11.33□□□□□ -0.6
SS18-226ENST00000585241 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
SS18-226ENST00000585241 NIT2Q9NQR4 276 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms