RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-236ENST00000584991 TRAV12-1A0A0B4J245 112 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 TRAV8-6A0A0B4J262 113 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 LINC01549A6NIU2 74 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 M0R381 172 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 GAS8-AS1O95177 125 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 NMUP48645 174 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 KRTAP10-3P60369 221 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 RAX2Q96IS3 184 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 C18orf15Q96N68 181 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
CDK5RAP3-236ENST00000584991 GAGE10A6NGK3 116 aa11.21□□□□□ -0.61
CDK5RAP3-236ENST00000584991 PLNP26678 52 aa11.21□□□□□ -0.61
CDK5RAP3-236ENST00000584991 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.61
CDK5RAP3-236ENST00000584991 A0A087WX48 190 aa11.21□□□□□ -0.62
CDK5RAP3-236ENST00000584991 GAGE12BA1L429 117 aa11.21□□□□□ -0.62
CDK5RAP3-236ENST00000584991 TAL2Q16559 108 aa11.21□□□□□ -0.62
CDK5RAP3-236ENST00000584991 PCP2Q8IVA1 136 aa11.21□□□□□ -0.62
CDK5RAP3-236ENST00000584991 CST9LQ9H4G1 147 aa11.21□□□□□ -0.62
CDK5RAP3-236ENST00000584991 DPH3P1Q9H4G8 78 aa11.21□□□□□ -0.62
CDK5RAP3-236ENST00000584991 CCL24O00175 119 aa11.2□□□□□ -0.62
CDK5RAP3-236ENST00000584991 ASIPP42127 132 aa11.2□□□□□ -0.62
CDK5RAP3-236ENST00000584991 UFSP1Q6NVU6 142 aa11.2□□□□□ -0.62
CDK5RAP3-236ENST00000584991 DLX4Q92988 240 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-236ENST00000584991 SMIM2Q9BVW6 85 aa11.2□□□□□ -0.62
CDK5RAP3-236ENST00000584991 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 NSUN5P1Q3KNT7 163 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 C20orf173Q96LM9 149 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 H3BVH4 76 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 RPL11P62913 178 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 FHL3Q13643 280 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 POM121L12Q8N7R1 296 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
CDK5RAP3-236ENST00000584991 TEP1Q99973 2627 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-236ENST00000584991 IGKV3-7A0A075B6H7 116 aa11.18□□□□□ -0.62
CDK5RAP3-236ENST00000584991 K7ERU9 68 aa11.18□□□□□ -0.62
CDK5RAP3-236ENST00000584991 RPL32P62910 135 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-236ENST00000584991 OCIAD2Q56VL3 154 aa11.18□□□□□ -0.62
CDK5RAP3-236ENST00000584991 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
CDK5RAP3-236ENST00000584991 TM2D2Q9BX73 214 aa11.18□□□□□ -0.62
CDK5RAP3-236ENST00000584991 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.623e-6■■■■□ 20.4
CDK5RAP3-236ENST00000584991 H7C1H1 209 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 S100A4P26447 101 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 SUMO2P61956 95 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 WFDC3Q8IUB2 231 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 PHLDA3Q9Y5J5 127 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 JMJD1CQ15652 2540 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 K7EP34 96 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 PRR9Q5T870 116 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
CDK5RAP3-236ENST00000584991 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
CDK5RAP3-236ENST00000584991 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
CDK5RAP3-236ENST00000584991 F8VRH5 84 aa11.16□□□□□ -0.62
CDK5RAP3-236ENST00000584991 NXPH4O95158 308 aa11.16□□□□□ -0.62
CDK5RAP3-236ENST00000584991 ID1P41134 155 aa11.16□□□□□ -0.62
CDK5RAP3-236ENST00000584991 NDUFA11Q86Y39 141 aa11.16□□□□□ -0.62
CDK5RAP3-236ENST00000584991 IGKV2D-26A0A0A0MRZ7 120 aa11.15□□□□□ -0.62
CDK5RAP3-236ENST00000584991 CHAC1Q9BUX1 264 aa11.15□□□□□ -0.62
CDK5RAP3-236ENST00000584991 MRPL35Q9NZE8 188 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-236ENST00000584991 A0A1W2PPM0 123 aa11.15□□□□□ -0.63
CDK5RAP3-236ENST00000584991 H3BUT2 72 aa11.15□□□□□ -0.63
CDK5RAP3-236ENST00000584991 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
CDK5RAP3-236ENST00000584991 PCP4P48539 62 aa11.14□□□□□ -0.63
CDK5RAP3-236ENST00000584991 ERASQ7Z444 233 aa11.14□□□□□ -0.63
CDK5RAP3-236ENST00000584991 RASL10AQ92737 203 aa11.14□□□□□ -0.63
CDK5RAP3-236ENST00000584991 ODF3Q96PU9 254 aa11.14□□□□□ -0.63
CDK5RAP3-236ENST00000584991 KLLNB2CW77 178 aa11.13□□□□□ -0.63
CDK5RAP3-236ENST00000584991 FABP2P12104 132 aa11.13□□□□□ -0.63
CDK5RAP3-236ENST00000584991 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
CDK5RAP3-236ENST00000584991 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
CDK5RAP3-236ENST00000584991 CEND1Q8N111 149 aa11.13□□□□□ -0.63
CDK5RAP3-236ENST00000584991 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
CDK5RAP3-236ENST00000584991 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
CDK5RAP3-236ENST00000584991 SCGB3A1Q96QR1 104 aa11.12□□□□□ -0.63
CDK5RAP3-236ENST00000584991 PRIMA1Q86XR5 153 aa11.12□□□□□ -0.63
CDK5RAP3-236ENST00000584991 MAST4O15021 2626 aa11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 GCSHP23434 173 aa11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 SAMD5Q5TGI4 173 aa11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 Q6ZQT7 251 aa11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-236ENST00000584991 C14orf178Q8N769 122 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-236ENST00000584991 DYNLRB2Q8TF09 96 aa11.1□□□□□ -0.63
CDK5RAP3-236ENST00000584991 CITED1Q99966 193 aa11.1□□□□□ -0.63
CDK5RAP3-236ENST00000584991 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
CDK5RAP3-236ENST00000584991 SPCS1Q9Y6A9 102 aa11.1□□□□□ -0.63
CDK5RAP3-236ENST00000584991 PF4P02776 101 aa11.09□□□□□ -0.63
CDK5RAP3-236ENST00000584991 FXYD2P54710 66 aa11.09□□□□□ -0.63
CDK5RAP3-236ENST00000584991 DEFB114Q30KQ6 69 aa11.09□□□□□ -0.63
CDK5RAP3-236ENST00000584991 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-236ENST00000584991 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms