RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 MRPL54Q6P161 138 aaKnown RBP6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 TMEM88Q6PEY1 159 aa6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 ZFP2Q6ZN57 461 aa6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 SMIM15Q7Z3B0 74 aa6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 CBLN2Q8IUK8 224 aa6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 C14orf178Q8N769 122 aaPredicted RBP6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 GATD1Q8NB37 220 aa6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 TMEM191AQ9H0A3 160 aa6.49□□□□□ -1.37
CDK5RAP3-220ENST00000581160 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 FBN3Q75N90 2809 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 TGIF2-C20orf24A0A0A6YYL0 155 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 SCO1O75880 301 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 ATP5G1P05496 136 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 EVI2AP22794 236 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 CAMPP49913 170 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 LINC00315P59091 139 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 NANOS2P60321 138 aaKnown RBP6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 COX19Q49B96 90 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 UFSP1Q6NVU6 142 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 ZNF479Q96JC4 524 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 AP1S3Q96PC3 154 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 DPH3P1Q9H4G8 78 aa6.48□□□□□ -1.37
CDK5RAP3-220ENST00000581160 A0A087WWL8 130 aa6.47□□□□□ -1.37
CDK5RAP3-220ENST00000581160 RHODO00212 210 aa6.47□□□□□ -1.37
CDK5RAP3-220ENST00000581160 FHL2Q14192 279 aa6.47□□□□□ -1.37
CDK5RAP3-220ENST00000581160 FAM210BQ96KR6 192 aa6.47□□□□□ -1.37
CDK5RAP3-220ENST00000581160 IGHV3-73A0A0B4J1V6 119 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRGV4A0A0C4DH28 118 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 COLCA2A8K830 154 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 IGHV3-53P01767 116 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 RAB4AP20338 218 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 RAB4BP61018 213 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 SLAQ13239 276 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 FAM74A4Q5TZK3 123 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 FAM104BQ5XKR9 115 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 Q6ZTC4 211 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 FRZBQ92765 325 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 RNF185Q96GF1 192 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 GNB1LQ9BYB4 327 aa6.46□□□□□ -1.38
CDK5RAP3-220ENST00000581160 NACAE9PAV3 2078 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRAV10A0A0B4J240 114 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRBV6-4A0A1B0GX49 114 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 F5H697 171 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 GATA1P15976 413 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 HOXA5P20719 270 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 Q6ZSN1 163 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 HHLA3Q9XRX5 114 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 COL7A1Q02388 2944 aa6.45□□□□□ -1.38
CDK5RAP3-220ENST00000581160 DEFB131BA0A096LNP1 70 aa6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 F5H768 121 aa6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 MT-ND6P03923 174 aa6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 MGPP08493 103 aa6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 CRYBA4P53673 196 aa6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 ZNF56Q15929 161 aa6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 PRO0255Q9UI72 69 aa6.44□□□□□ -1.38
CDK5RAP3-220ENST00000581160 M0QY20 66 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 HLA-DQA1P01909 254 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 APCSP02743 223 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 HTN3P15516 51 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 SLC25A29Q8N8R3 303 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 PHLDA1Q8WV24 401 aaPredicted RBP6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 MRAP2Q96G30 205 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRBV10-1A0A0K0K1A3 114 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 H3BNG1 76 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 H7C1H1 209 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 PAX4O43316 350 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 PPBPP02775 128 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 RAB5AP20339 215 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 VSIG2Q96IQ7 327 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 DNAJC30Q96LL9 226 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 PRADC1Q9BSG0 188 aa6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
CDK5RAP3-220ENST00000581160 STAB2Q8WWQ8 2551 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRAV26-1A0A087WT03 109 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRAV26-2A0A0B4J265 109 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 K7EQD1 137 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 PPP1R17O96001 155 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 CKS2P33552 79 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 FABP9Q0Z7S8 132 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 RHOHQ15669 191 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 CEMP1Q6PRD7 247 aaPredicted RBP6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 WWC2-AS2Q96NR7 200 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 NIT2Q9NQR4 276 aa6.41□□□□□ -1.38
CDK5RAP3-220ENST00000581160 A0A0J9YY99 117 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 TRBV6-5A0A0K0K1A5 114 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 D6R8Y8 96 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 SMKR1H3BMG3 65 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 GAS8-AS1O95177 125 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 P0DMU3 169 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 FAM231AP0DMU4 169 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 FAM231CP0DMU5 169 aa6.4□□□□□ -1.38
CDK5RAP3-220ENST00000581160 KIAA1644Q3SXP7 199 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms