RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
CTDNEP1-211ENST00000575783 KRTAP9-6A0A140TA67 174 aa10.22□□□□□ -0.77
CTDNEP1-211ENST00000575783 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-211ENST00000575783 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
CTDNEP1-211ENST00000575783 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
CTDNEP1-211ENST00000575783 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 H3BVH4 76 aa10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 K7EQM0 130 aa10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 TCRAP04437 139 aa10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 LINC00269Q8N2A0 174 aa10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 AP5S1Q9NUS5 200 aa10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 IL36BQ9NZH7 164 aa10.21□□□□□ -0.77
CTDNEP1-211ENST00000575783 FAT4Q6V0I7 4981 aa10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 TRBV10-1A0A0K0K1A3 114 aa10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 HMGB3O15347 200 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 PTTG1O95997 202 aa10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 FLI1Q01543 452 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 OR11H4Q8NGC9 324 aa10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 LYPD6BQ8NI32 183 aa10.2□□□□□ -0.78
CTDNEP1-211ENST00000575783 IGLV10-54A0A075B6I4 117 aa10.19□□□□□ -0.78
CTDNEP1-211ENST00000575783 A0A1W2PPV4 95 aa10.19□□□□□ -0.78
CTDNEP1-211ENST00000575783 SLPIP03973 132 aa10.19□□□□□ -0.78
CTDNEP1-211ENST00000575783 ARMS2P0C7Q2 107 aa10.19□□□□□ -0.78
CTDNEP1-211ENST00000575783 SPINK6Q6UWN8 80 aa10.19□□□□□ -0.78
CTDNEP1-211ENST00000575783 SFRP2Q96HF1 295 aa10.19□□□□□ -0.78
CTDNEP1-211ENST00000575783 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
CTDNEP1-211ENST00000575783 TCRBP04435 133 aa10.18□□□□□ -0.78
CTDNEP1-211ENST00000575783 LRRC37A5PQ49AS3 106 aa10.18□□□□□ -0.78
CTDNEP1-211ENST00000575783 SAPCD1Q5SSQ6 148 aa10.18□□□□□ -0.78
CTDNEP1-211ENST00000575783 C5orf17Q8NAS9 161 aa10.18□□□□□ -0.78
CTDNEP1-211ENST00000575783 SCGB1C1Q8TD33 95 aa10.18□□□□□ -0.78
CTDNEP1-211ENST00000575783 SDHCQ99643 169 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-211ENST00000575783 GRIFINA4D1Z8 144 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 FABP5P3A8MUU1 101 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 B4DEV8 164 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 M0R381 172 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 PKIAP61925 76 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 RBX1P62877 108 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 MAJINQ3KP22 176 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 NUDT15Q9NV35 164 aa10.17□□□□□ -0.78
CTDNEP1-211ENST00000575783 IL7P13232 177 aa10.16□□□□□ -0.78
CTDNEP1-211ENST00000575783 COX6A2Q02221 97 aa10.16□□□□□ -0.78
CTDNEP1-211ENST00000575783 GAGE6Q13070 117 aa10.16□□□□□ -0.78
CTDNEP1-211ENST00000575783 PHLDA3Q9Y5J5 127 aa10.16□□□□□ -0.78
CTDNEP1-211ENST00000575783 IGKV2-24A0A0C4DH68 120 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 MUC21A0A0G2JKD1 596 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 M0R036 132 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 PLA2G10O15496 165 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 SIX6O95475 246 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 RAB5CP51148 216 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 RAB2AP61019 212 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 SUMO1P63165 101 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 OR10G8Q8NGN5 311 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 EPDR1Q9UM22 224 aa10.15□□□□□ -0.78
CTDNEP1-211ENST00000575783 CCDC160A6NGH7 325 aa10.14□□□□□ -0.79
CTDNEP1-211ENST00000575783 H0YIZ8 118 aa10.14□□□□□ -0.79
CTDNEP1-211ENST00000575783 LYRM1O43325 122 aa10.14□□□□□ -0.79
CTDNEP1-211ENST00000575783 ARL14EPLP0DKL9 152 aa10.14□□□□□ -0.79
CTDNEP1-211ENST00000575783 STPG4Q8N801 248 aa10.14□□□□□ -0.79
CTDNEP1-211ENST00000575783 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
CTDNEP1-211ENST00000575783 TRAV34A0A0B4J273 112 aa10.13□□□□□ -0.79
CTDNEP1-211ENST00000575783 KRBOX1C9JBD0 128 aa10.13□□□□□ -0.79
CTDNEP1-211ENST00000575783 H2AFB2P0C5Z0 115 aa10.13□□□□□ -0.79
CTDNEP1-211ENST00000575783 TPT1P13693 172 aaKnown RBP10.13□□□□□ -0.79
CTDNEP1-211ENST00000575783 REG3AQ06141 175 aa10.13□□□□□ -0.79
CTDNEP1-211ENST00000575783 NTM-AS1Q6ZSK4 140 aa10.13□□□□□ -0.79
CTDNEP1-211ENST00000575783 PRSS3P2Q8NHM4 247 aa10.12□□□□□ -0.79
CTDNEP1-211ENST00000575783 ARL2-SNX15V9GYD0 113 aa10.12□□□□□ -0.79
CTDNEP1-211ENST00000575783 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
CTDNEP1-211ENST00000575783 SRSF9Q13242 221 aaKnown RBP eCLIP10.11□□□□□ -0.79
CTDNEP1-211ENST00000575783 ZNF56Q15929 161 aa10.11□□□□□ -0.79
CTDNEP1-211ENST00000575783 DNLZQ5SXM8 178 aa10.11□□□□□ -0.79
CTDNEP1-211ENST00000575783 DERL1Q9BUN8 251 aa10.11□□□□□ -0.79
CTDNEP1-211ENST00000575783 A0A0U1RQV1 116 aa10.1□□□□□ -0.79
CTDNEP1-211ENST00000575783 NDUFS6O75380 124 aaKnown RBP10.1□□□□□ -0.79
CTDNEP1-211ENST00000575783 CRIP1P50238 77 aa10.1□□□□□ -0.79
CTDNEP1-211ENST00000575783 RAB4BP61018 213 aa10.1□□□□□ -0.79
CTDNEP1-211ENST00000575783 ZFP82Q8N141 532 aa10.1□□□□□ -0.79
CTDNEP1-211ENST00000575783 HSPB11Q9Y547 144 aa10.1□□□□□ -0.79
CTDNEP1-211ENST00000575783 H7C1H1 209 aa10.09□□□□□ -0.79
CTDNEP1-211ENST00000575783 GCHFRP30047 84 aa10.09□□□□□ -0.79
CTDNEP1-211ENST00000575783 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-211ENST00000575783 RBM38Q9H0Z9 239 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-211ENST00000575783 TRBV25-1A0A075B6N4 114 aa10.08□□□□□ -0.8
CTDNEP1-211ENST00000575783 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
CTDNEP1-211ENST00000575783 IFNA7P01567 189 aa10.08□□□□□ -0.8
CTDNEP1-211ENST00000575783 P01737 135 aa10.08□□□□□ -0.8
CTDNEP1-211ENST00000575783 CDC34P49427 236 aaPredicted RBP10.08□□□□□ -0.8
CTDNEP1-211ENST00000575783 TMEM97Q5BJF2 176 aa10.08□□□□□ -0.8
CTDNEP1-211ENST00000575783 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
CTDNEP1-211ENST00000575783 SH2D1AO60880 128 aa10.07□□□□□ -0.8
CTDNEP1-211ENST00000575783 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
CTDNEP1-211ENST00000575783 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
CTDNEP1-211ENST00000575783 PRR27Q6MZM9 219 aa10.07□□□□□ -0.8
CTDNEP1-211ENST00000575783 SUN5Q8TC36 379 aa10.07□□□□□ -0.8
CTDNEP1-211ENST00000575783 WFDC1Q9HC57 220 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms