RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 SPAG8Q99932 426 aaPredicted RBP13.69□□□□□ -0.22
PKD1-235ENST00000568591 TRAV12-2A0A075B6T6 113 aa13.69□□□□□ -0.22
PKD1-235ENST00000568591 F5H697 171 aa13.69□□□□□ -0.22
PKD1-235ENST00000568591 CD7P09564 240 aa13.69□□□□□ -0.22
PKD1-235ENST00000568591 SHISA2Q6UWI4 295 aa13.69□□□□□ -0.22
PKD1-235ENST00000568591 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
PKD1-235ENST00000568591 A6NDX4 124 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 KLLNB2CW77 178 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 TSPEAR-AS2P59090 65 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 DAZ1Q9NQZ3 744 aaKnown RBP13.68□□□□□ -0.22
PKD1-235ENST00000568591 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 TRAV26-1A0A087WT03 109 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 LINC01549A6NIU2 74 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 IGIPA6NJ69 53 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 HOXA3O43365 443 aaPredicted RBP13.68□□□□□ -0.22
PKD1-235ENST00000568591 GAGE13Q4V321 117 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 FAM159AQ6UWV7 190 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 USMG5Q96IX5 58 aa13.68□□□□□ -0.22
PKD1-235ENST00000568591 MRPL16Q9NX20 251 aaKnown RBP13.68□□□□□ -0.22
PKD1-235ENST00000568591 NXPH4O95158 308 aa13.67□□□□□ -0.22
PKD1-235ENST00000568591 AVPP01185 164 aa13.67□□□□□ -0.22
PKD1-235ENST00000568591 MED14OSP0DP75 135 aa13.67□□□□□ -0.22
PKD1-235ENST00000568591 OPRPNQ99935 248 aaPredicted RBP13.67□□□□□ -0.22
PKD1-235ENST00000568591 AZU1P20160 251 aa13.67□□□□□ -0.22
PKD1-235ENST00000568591 POLR2KP53803 58 aaKnown RBP13.67□□□□□ -0.22
PKD1-235ENST00000568591 SMAGPQ0VAQ4 97 aa13.67□□□□□ -0.22
PKD1-235ENST00000568591 SRSF9Q13242 221 aaKnown RBP eCLIP13.67□□□□□ -0.22
PKD1-235ENST00000568591 DCANP1Q8TF63 244 aa13.67□□□□□ -0.22
PKD1-235ENST00000568591 ZNF688P0C7X2 276 aa13.66□□□□□ -0.22
PKD1-235ENST00000568591 POM121L12Q8N7R1 296 aa13.66□□□□□ -0.22
PKD1-235ENST00000568591 MDFICQ9P1T7 246 aa13.66□□□□□ -0.22
PKD1-235ENST00000568591 IGHV4-30-2A0A087WSY4 118 aa13.66□□□□□ -0.22
PKD1-235ENST00000568591 LINC01619G3V211 115 aa13.66□□□□□ -0.22
PKD1-235ENST00000568591 APOMO95445 188 aa13.66□□□□□ -0.22
PKD1-235ENST00000568591 ZNRF2Q8NHG8 242 aa13.66□□□□□ -0.22
PKD1-235ENST00000568591 ZNF256Q9Y2P7 627 aaPredicted RBP13.66□□□□□ -0.22
PKD1-235ENST00000568591 SDHAF1A6NFY7 115 aa13.65□□□□□ -0.22
PKD1-235ENST00000568591 IGLV1-40P01703 118 aa13.65□□□□□ -0.22
PKD1-235ENST00000568591 USP9YO00507 2555 aaPredicted RBP13.65□□□□□ -0.22
PKD1-235ENST00000568591 IGHV4OR15-8A0A075B7B6 117 aa13.64□□□□□ -0.23
PKD1-235ENST00000568591 A0A087WW49 117 aa13.64□□□□□ -0.23
PKD1-235ENST00000568591 GAGE12HA6NDE8 117 aa13.64□□□□□ -0.23
PKD1-235ENST00000568591 TSPAN13O95857 204 aa13.64□□□□□ -0.23
PKD1-235ENST00000568591 SMCPP49901 116 aaPredicted RBP13.64□□□□□ -0.23
PKD1-235ENST00000568591 USP9XQ93008 2570 aaPredicted RBP13.63□□□□□ -0.23
PKD1-235ENST00000568591 TMEM170BQ5T4T1 132 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 PIMREGQ9BSJ6 248 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 PKD1L2Q7Z442 2459 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 LOC107984156A0A0G2JMH3 177 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 A0A0J9YY99 117 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 UBE2D1P51668 147 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 ARL17AQ8IVW1 177 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 C10orf105Q8TEF2 133 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 POLQO75417 2590 aa13.63□□□□□ -0.23
PKD1-235ENST00000568591 PMVKQ15126 192 aa13.62□□□□□ -0.23
PKD1-235ENST00000568591 CFHR3Q02985 330 aa13.62□□□□□ -0.23
PKD1-235ENST00000568591 H3BUA1 57 aa13.61□□□□□ -0.23
PKD1-235ENST00000568591 TGFAP01135 160 aa13.61□□□□□ -0.23
PKD1-235ENST00000568591 CCL19Q99731 98 aa13.61□□□□□ -0.23
PKD1-235ENST00000568591 PPP1R17O96001 155 aa13.61□□□□□ -0.23
PKD1-235ENST00000568591 PTH2Q96A98 100 aa13.61□□□□□ -0.23
PKD1-235ENST00000568591 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
PKD1-235ENST00000568591 PSMB2P49721 201 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 Q8N1Y9 231 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 SIGMAR1Q99720 223 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 CENPEQ02224 2701 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 IGHV3-64A0A075B6Q5 118 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 TRBV7-9A0A0J9YWB2 115 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 VCYO14598 125 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 ZNF56Q15929 161 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 SPINK13Q1W4C9 94 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 NRGNQ92686 78 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 DUX5Q96PT3 197 aa13.6□□□□□ -0.23
PKD1-235ENST00000568591 IGHV3-16A0A0C4DH30 117 aa13.59□□□□□ -0.23
PKD1-235ENST00000568591 CKS1BP61024 79 aa13.59□□□□□ -0.23
PKD1-235ENST00000568591 ZNF418Q8TF45 676 aaPredicted RBP13.59□□□□□ -0.23
PKD1-235ENST00000568591 ATP5J2P56134 94 aa13.59□□□□□ -0.23
PKD1-235ENST00000568591 NFE4Q86UQ8 179 aa13.59□□□□□ -0.23
PKD1-235ENST00000568591 AMELXQ99217 191 aa13.59□□□□□ -0.23
PKD1-235ENST00000568591 BRI3O95415 125 aa13.58□□□□□ -0.23
PKD1-235ENST00000568591 CFAP126Q5VTH2 177 aa13.58□□□□□ -0.23
PKD1-235ENST00000568591 ZNF580Q9UK33 172 aa13.58□□□□□ -0.23
PKD1-235ENST00000568591 IGHV4-59P01825 116 aa13.58□□□□□ -0.24
PKD1-235ENST00000568591 ZNF876PQ49A33 203 aa13.58□□□□□ -0.24
PKD1-235ENST00000568591 NDUFA11Q86Y39 141 aa13.58□□□□□ -0.24
PKD1-235ENST00000568591 TRBV27A0A0K0K1C4 114 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 M0QY20 66 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 MSMBP08118 114 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 ID1P41134 155 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 C9orf85Q96MD7 179 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 MXRA5Q9NR99 2828 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 LGALS9O00182 355 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 IGHV3-30P01768 117 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 P0DMU3 169 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 FAM231AP0DMU4 169 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 FAM231CP0DMU5 169 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 IGHV3-30-5P0DP03 117 aa13.57□□□□□ -0.24
PKD1-235ENST00000568591 RPL32P62910 135 aaKnown RBP13.57□□□□□ -0.24
PKD1-235ENST00000568591 CFC1BP0CG36 223 aa13.56□□□□□ -0.24
PKD1-235ENST00000568591 CFC1P0CG37 223 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms