RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 OR10AG1Q8NH19 301 aa11.73□□□□□ -0.53
CLN6-208ENST00000567060 V9GYV3 84 aa11.73□□□□□ -0.53
CLN6-208ENST00000567060 GZMBP10144 247 aa11.72□□□□□ -0.53
CLN6-208ENST00000567060 HOXA5P20719 270 aa11.72□□□□□ -0.53
CLN6-208ENST00000567060 BORCS7Q96B45 105 aa11.72□□□□□ -0.53
CLN6-208ENST00000567060 ANAPC16Q96DE5 110 aa11.72□□□□□ -0.53
CLN6-208ENST00000567060 ZNF479Q96JC4 524 aa11.72□□□□□ -0.53
CLN6-208ENST00000567060 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
CLN6-208ENST00000567060 HHLA3Q9XRX5 114 aa11.72□□□□□ -0.53
CLN6-208ENST00000567060 TRBV6-4A0A1B0GX49 114 aa11.71□□□□□ -0.53
CLN6-208ENST00000567060 MT-ND4LP03901 98 aa11.71□□□□□ -0.53
CLN6-208ENST00000567060 TRGC1P0CF51 173 aa11.71□□□□□ -0.53
CLN6-208ENST00000567060 C10orf91Q5T1B1 145 aa11.71□□□□□ -0.53
CLN6-208ENST00000567060 TMEM88Q6PEY1 159 aa11.71□□□□□ -0.53
CLN6-208ENST00000567060 LYZL1Q6UWQ5 148 aa11.71□□□□□ -0.53
CLN6-208ENST00000567060 TPPP3Q9BW30 176 aa11.71□□□□□ -0.53
CLN6-208ENST00000567060 NACAE9PAV3 2078 aa11.71□□□□□ -0.54
CLN6-208ENST00000567060 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
CLN6-208ENST00000567060 CRYBA4P53673 196 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 NDUFA5Q16718 116 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 UFSP1Q6NVU6 142 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 GTSF1Q8WW33 167 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 NAT8BQ9UHF3 227 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 APLNQ9ULZ1 77 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
CLN6-208ENST00000567060 FAT2Q9NYQ8 4349 aa11.7□□□□□ -0.54
CLN6-208ENST00000567060 TRAV26-1A0A087WT03 109 aa11.69□□□□□ -0.54
CLN6-208ENST00000567060 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
CLN6-208ENST00000567060 PAX4O43316 350 aa11.69□□□□□ -0.54
CLN6-208ENST00000567060 SMIM17P0DL12 118 aa11.69□□□□□ -0.54
CLN6-208ENST00000567060 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
CLN6-208ENST00000567060 DNAH2Q9P225 4427 aa11.69□□□□□ -0.54
CLN6-208ENST00000567060 SMIM27A0A1W2PRY6 76 aa11.68□□□□□ -0.54
CLN6-208ENST00000567060 CRYGDP07320 174 aa11.68□□□□□ -0.54
CLN6-208ENST00000567060 RHOHQ15669 191 aa11.68□□□□□ -0.54
CLN6-208ENST00000567060 SH2D6Q7Z4S9 175 aa11.68□□□□□ -0.54
CLN6-208ENST00000567060 PRADC1Q9BSG0 188 aa11.68□□□□□ -0.54
CLN6-208ENST00000567060 PKHD1P08F94 4074 aa11.68□□□□□ -0.54
CLN6-208ENST00000567060 A0A1B0GUT8 65 aa11.67□□□□□ -0.54
CLN6-208ENST00000567060 NTF3P20783 257 aa11.67□□□□□ -0.54
CLN6-208ENST00000567060 RAB4BP61018 213 aa11.67□□□□□ -0.54
CLN6-208ENST00000567060 SMIM15Q7Z3B0 74 aa11.67□□□□□ -0.54
CLN6-208ENST00000567060 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
CLN6-208ENST00000567060 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
CLN6-208ENST00000567060 A0A1B0GW15 77 aa11.66□□□□□ -0.54
CLN6-208ENST00000567060 P0DMU3 169 aa11.66□□□□□ -0.54
CLN6-208ENST00000567060 FAM231AP0DMU4 169 aa11.66□□□□□ -0.54
CLN6-208ENST00000567060 FAM231CP0DMU5 169 aa11.66□□□□□ -0.54
CLN6-208ENST00000567060 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
CLN6-208ENST00000567060 RNF212Q495C1 297 aa11.66□□□□□ -0.54
CLN6-208ENST00000567060 ICOSQ9Y6W8 199 aa11.66□□□□□ -0.54
CLN6-208ENST00000567060 TRBV10-1A0A0K0K1A3 114 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 RIGQ13278 110 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 TWIST1Q15672 202 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 FAM74A4Q5TZK3 123 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 LGALS9CQ6DKI2 356 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 FRZBQ92765 325 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 PGLYRP4Q96LB8 373 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 DPH3P1Q9H4G8 78 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 JPT2Q9H910 190 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 DNAH17Q9UFH2 4485 aa11.65□□□□□ -0.54
CLN6-208ENST00000567060 A0A087WWL8 130 aa11.64□□□□□ -0.55
CLN6-208ENST00000567060 A0A0J9YY99 117 aa11.64□□□□□ -0.55
CLN6-208ENST00000567060 K7EQD1 137 aa11.64□□□□□ -0.55
CLN6-208ENST00000567060 FAM3BP58499 235 aaPredicted RBP11.64□□□□□ -0.55
CLN6-208ENST00000567060 SLC25A29Q8N8R3 303 aa11.64□□□□□ -0.55
CLN6-208ENST00000567060 TMEM242Q9NWH2 141 aa11.64□□□□□ -0.55
CLN6-208ENST00000567060 KIF25-AS1Q9Y6Z4 181 aa11.64□□□□□ -0.55
CLN6-208ENST00000567060 DYNC1H1Q14204 4646 aaKnown RBP11.64□□□□□ -0.55
CLN6-208ENST00000567060 MUC21A0A0G2JKD1 596 aa11.63□□□□□ -0.55
CLN6-208ENST00000567060 MUC21A0A140T8X8 626 aa11.63□□□□□ -0.55
CLN6-208ENST00000567060 H7C1H1 209 aa11.63□□□□□ -0.55
CLN6-208ENST00000567060 NUDT3O95989 172 aa11.63□□□□□ -0.55
CLN6-208ENST00000567060 S100A8P05109 93 aa11.63□□□□□ -0.55
CLN6-208ENST00000567060 RHEBQ15382 184 aa11.63□□□□□ -0.55
CLN6-208ENST00000567060 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
CLN6-208ENST00000567060 A0A087WWC5 75 aa11.62□□□□□ -0.55
CLN6-208ENST00000567060 IGHV3-73A0A0B4J1V6 119 aa11.62□□□□□ -0.55
CLN6-208ENST00000567060 SRIP30626 198 aa11.62□□□□□ -0.55
CLN6-208ENST00000567060 ATP5L2Q7Z4Y8 100 aa11.62□□□□□ -0.55
CLN6-208ENST00000567060 SVBPQ8N300 66 aa11.62□□□□□ -0.55
CLN6-208ENST00000567060 MSRB1Q9NZV6 116 aa11.62□□□□□ -0.55
CLN6-208ENST00000567060 ABCA13Q86UQ4 5058 aa11.62□□□□□ -0.55
CLN6-208ENST00000567060 A0A096LPF7 62 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 GYPEP15421 78 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 EVI2AP22794 236 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 CCL18P55774 89 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 LINC00315P59091 139 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 ZNF56Q15929 161 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 NEGR1Q7Z3B1 354 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
CLN6-208ENST00000567060 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
CLN6-208ENST00000567060 SNAPINO95295 136 aa11.6□□□□□ -0.55
CLN6-208ENST00000567060 TIRAPP58753 221 aa11.6□□□□□ -0.55
CLN6-208ENST00000567060 SSTP61278 116 aa11.6□□□□□ -0.55
CLN6-208ENST00000567060 CLRN3Q8NCR9 226 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms