RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 OGNP20774 298 aaKnown RBP2.09□□□□□ -2.07
SMG1-204ENST00000561940 DYNLT1P63172 113 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 TSNQ15631 228 aaKnown RBP2.09□□□□□ -2.07
SMG1-204ENST00000561940 C15orf53Q8NAA6 179 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 OR13D1Q8NGV5 346 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 SLC50A1Q9BRV3 221 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 LINC00470Q9BZP3 86 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 DNAH3Q8TD57 4116 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 TRAV14DV4A0A0A6YYC5 116 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 IGKV2-29A2NJV5 120 aaPredicted RBP2.08□□□□□ -2.08
SMG1-204ENST00000561940 H3BUX3 64 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 APOC4-APOC2K7ER74 178 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 NPFFO15130 113 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 APOC2P02655 101 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 S100A5P33763 92 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 SARNPP82979 210 aaKnown RBP2.08□□□□□ -2.08
SMG1-204ENST00000561940 ZNF846Q147U1 533 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 C3orf33Q6P1S2 294 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 YPEL2Q96QA6 119 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 NABP2Q9BQ15 211 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 CYSTM1Q9H1C7 97 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 TMEM133Q9H2Q1 129 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 MED9Q9NWA0 146 aa2.08□□□□□ -2.08
SMG1-204ENST00000561940 IGKV1D-42A0A075B6H8 117 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 G3V2T6 193 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 NDUFA2O43678 99 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 MRPS14O60783 128 aaKnown RBP2.07□□□□□ -2.08
SMG1-204ENST00000561940 ASAH2BP0C7U1 165 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 ATP5G3P48201 142 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 RRN3P1Q2M238 152 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 BCL2L15Q5TBC7 163 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 SLC48A1Q6P1K1 146 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 Q6ZSA8 131 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 OR2T10Q8NGZ9 312 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 STARD9Q9P2P6 4700 aa2.07□□□□□ -2.08
SMG1-204ENST00000561940 HECTD4Q9Y4D8 3996 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 TRGV10A0A0A0MS01 117 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 IFNA1P01562 189 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 C1QBP02746 253 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 MIFP14174 115 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 SCGB2B2Q4G0G5 96 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 AKR1C8PQ5T2L2 129 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 MMGT1Q8N4V1 131 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 AQP3Q92482 292 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 ADAT1Q9BUB4 502 aaKnown RBP2.06□□□□□ -2.08
SMG1-204ENST00000561940 TMEM70Q9BUB7 260 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 DNAH7Q8WXX0 4024 aa2.06□□□□□ -2.08
SMG1-204ENST00000561940 UBL3O95164 117 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 IFI6P09912 130 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 SRIP30626 198 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 DYNLT3P51808 116 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 NCALDP61601 193 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 BLCAPP62952 87 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 VMO1Q7Z5L0 202 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 OR13C6PQ8NH95 151 aa2.05□□□□□ -2.08
SMG1-204ENST00000561940 UTP11Q9Y3A2 253 aaKnown RBP2.05□□□□□ -2.08
SMG1-204ENST00000561940 GGCTO75223 188 aaKnown RBP2.04□□□□□ -2.08
SMG1-204ENST00000561940 PHBP35232 272 aa2.04□□□□□ -2.08
SMG1-204ENST00000561940 LINC00322Q6ZN03 302 aaPredicted RBP2.04□□□□□ -2.08
SMG1-204ENST00000561940 HUWE1Q7Z6Z7 4374 aaKnown RBP2.04□□□□□ -2.08
SMG1-204ENST00000561940 SLC30A7Q8NEW0 376 aa2.04□□□□□ -2.08
SMG1-204ENST00000561940 ADAT3Q96EY9 351 aaPredicted RBP2.04□□□□□ -2.08
SMG1-204ENST00000561940 LYRM2Q9NU23 88 aaPredicted RBP2.04□□□□□ -2.08
SMG1-204ENST00000561940 ACER3Q9NUN7 267 aa2.04□□□□□ -2.08
SMG1-204ENST00000561940 SSR3Q9UNL2 185 aa2.04□□□□□ -2.08
SMG1-204ENST00000561940 HSPG2P98160 4391 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 TRAV1-1A0A0B4J248 108 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 IGKV1-9A0A0C4DH69 117 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 H7C1C5 153 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 M0R1W7 72 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 OR2T1O43869 369 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 MGST1P10620 155 aaKnown RBP2.03□□□□□ -2.08
SMG1-204ENST00000561940 BRS3P32247 399 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 SRP9P49458 86 aaKnown RBP2.03□□□□□ -2.08
SMG1-204ENST00000561940 LCN6P62502 163 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 CDK5R1Q15078 307 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 SPRNQ5BIV9 151 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 C10orf55Q5SWW7 151 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 Q5VSD8 79 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 LINC00311Q8N616 119 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 TEX47Q8TBZ9 253 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 MALSU1Q96EH3 234 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 PRRT1Q99946 306 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 PBDC1Q9BVG4 233 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 TAS2R7Q9NYW3 318 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 KAAG1Q9UBP8 84 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 PRNDQ9UKY0 176 aa2.03□□□□□ -2.08
SMG1-204ENST00000561940 PKHD1P08F94 4074 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 PLECQ15149 4684 aaKnown RBP2.02□□□□□ -2.09
SMG1-204ENST00000561940 IGKV3D-7A0A0C4DH55 119 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 IGKV3OR2-268A0A0C4DH90 116 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 M0QZK8 103 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 BANF1O75531 89 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 IFNA14P01570 189 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 APOA2P02652 100 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 IFNA4P05014 189 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 GNG5P63218 68 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 RHOGP84095 191 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 MYL5Q02045 173 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 ESRGQ1W209 222 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms