RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 DEFB130BP0DP73 79 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 DEFB130AP0DP74 79 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 COX19Q49B96 90 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 CFAP126Q5VTH2 177 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 TMEM136Q6ZRR5 245 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 POM121L12Q8N7R1 296 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 GNB1LQ9BYB4 327 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 SAMD10Q9BYL1 202 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 KIF25-AS1Q9Y6Z4 181 aa12.86□□□□□ -0.35
CLPX-203ENST00000558958 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 TEX48A0A1B0GUV7 120 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 RAB4BP61018 213 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 C18orf15Q96N68 181 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 A0A087WWL8 130 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 RAB5AP20339 215 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 DPH3P1Q9H4G8 78 aa12.85□□□□□ -0.35
CLPX-203ENST00000558958 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
CLPX-203ENST00000558958 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
CLPX-203ENST00000558958 LINC00315P59091 139 aa12.84□□□□□ -0.35
CLPX-203ENST00000558958 FAM104BQ5XKR9 115 aa12.84□□□□□ -0.35
CLPX-203ENST00000558958 UFSP1Q6NVU6 142 aa12.84□□□□□ -0.35
CLPX-203ENST00000558958 OR4C5Q8NGB2 326 aa12.84□□□□□ -0.35
CLPX-203ENST00000558958 HLA-DQA1P01909 254 aa12.83□□□□□ -0.36
CLPX-203ENST00000558958 MT-ND6P03923 174 aa12.83□□□□□ -0.36
CLPX-203ENST00000558958 DAD1P61803 113 aa12.83□□□□□ -0.36
CLPX-203ENST00000558958 FAM74A4Q5TZK3 123 aa12.83□□□□□ -0.36
CLPX-203ENST00000558958 AMN1Q8IY45 258 aa12.83□□□□□ -0.36
CLPX-203ENST00000558958 ZFP2Q6ZN57 461 aa12.82□□□□□ -0.36
CLPX-203ENST00000558958 RNF185Q96GF1 192 aa12.82□□□□□ -0.36
CLPX-203ENST00000558958 ZNF479Q96JC4 524 aa12.82□□□□□ -0.36
CLPX-203ENST00000558958 NACAE9PAV3 2078 aa12.81□□□□□ -0.36
CLPX-203ENST00000558958 RHODO00212 210 aa12.81□□□□□ -0.36
CLPX-203ENST00000558958 RAB4AP20338 218 aa12.81□□□□□ -0.36
CLPX-203ENST00000558958 RPS10P46783 165 aaKnown RBP12.81□□□□□ -0.36
CLPX-203ENST00000558958 SLAQ13239 276 aa12.81□□□□□ -0.36
CLPX-203ENST00000558958 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
CLPX-203ENST00000558958 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.81□□□□□ -0.36
CLPX-203ENST00000558958 IGHV3-73A0A0B4J1V6 119 aa12.8□□□□□ -0.36
CLPX-203ENST00000558958 IGHV3-53P01767 116 aa12.8□□□□□ -0.36
CLPX-203ENST00000558958 MRPL18Q9H0U6 180 aaKnown RBP12.8□□□□□ -0.36
CLPX-203ENST00000558958 TRAPPC1Q9Y5R8 145 aa12.8□□□□□ -0.36
CLPX-203ENST00000558958 CIDEAO60543 219 aa12.79□□□□□ -0.36
CLPX-203ENST00000558958 APCSP02743 223 aa12.79□□□□□ -0.36
CLPX-203ENST00000558958 MGPP08493 103 aa12.79□□□□□ -0.36
CLPX-203ENST00000558958 FRZBQ92765 325 aa12.79□□□□□ -0.36
CLPX-203ENST00000558958 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
CLPX-203ENST00000558958 C11orf45Q8TAV5 145 aa12.78□□□□□ -0.36
CLPX-203ENST00000558958 STAB2Q8WWQ8 2551 aa12.78□□□□□ -0.36
CLPX-203ENST00000558958 F5H697 171 aa12.78□□□□□ -0.36
CLPX-203ENST00000558958 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
CLPX-203ENST00000558958 ZNF56Q15929 161 aa12.78□□□□□ -0.36
CLPX-203ENST00000558958 U3KQK5 164 aa12.78□□□□□ -0.36
CLPX-203ENST00000558958 ATP5G1P05496 136 aa12.77□□□□□ -0.37
CLPX-203ENST00000558958 FHL2Q14192 279 aa12.77□□□□□ -0.37
CLPX-203ENST00000558958 SUMO4Q6EEV6 95 aa12.77□□□□□ -0.37
CLPX-203ENST00000558958 Q6ZSN1 163 aa12.77□□□□□ -0.37
CLPX-203ENST00000558958 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
CLPX-203ENST00000558958 TRGC2P03986 189 aa12.76□□□□□ -0.37
CLPX-203ENST00000558958 NANOS2P60321 138 aaKnown RBP12.76□□□□□ -0.37
CLPX-203ENST00000558958 KIAA1644Q3SXP7 199 aa12.76□□□□□ -0.37
CLPX-203ENST00000558958 MRAP2Q96G30 205 aa12.76□□□□□ -0.37
CLPX-203ENST00000558958 EDA2RQ9HAV5 297 aa12.76□□□□□ -0.37
CLPX-203ENST00000558958 TRGV4A0A0C4DH28 118 aa12.75□□□□□ -0.37
CLPX-203ENST00000558958 GATA1P15976 413 aaPredicted RBP12.75□□□□□ -0.37
CLPX-203ENST00000558958 HOXA5P20719 270 aa12.75□□□□□ -0.37
CLPX-203ENST00000558958 Q6ZTC4 211 aa12.75□□□□□ -0.37
CLPX-203ENST00000558958 D6R8Y8 96 aa12.74□□□□□ -0.37
CLPX-203ENST00000558958 M0QY20 66 aa12.74□□□□□ -0.37
CLPX-203ENST00000558958 PHOX2AO14813 284 aa12.74□□□□□ -0.37
CLPX-203ENST00000558958 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
CLPX-203ENST00000558958 PPBPP02775 128 aa12.74□□□□□ -0.37
CLPX-203ENST00000558958 CKS2P33552 79 aa12.74□□□□□ -0.37
CLPX-203ENST00000558958 SMKR1H3BMG3 65 aa12.73□□□□□ -0.37
CLPX-203ENST00000558958 NCR2O95944 276 aa12.73□□□□□ -0.37
CLPX-203ENST00000558958 ORMDL3Q8N138 153 aa12.73□□□□□ -0.37
CLPX-203ENST00000558958 SLC25A29Q8N8R3 303 aa12.72□□□□□ -0.37
CLPX-203ENST00000558958 HHLA3Q9XRX5 114 aa12.72□□□□□ -0.37
CLPX-203ENST00000558958 TRBV6-4A0A1B0GX49 114 aa12.72□□□□□ -0.37
CLPX-203ENST00000558958 F5H768 121 aa12.72□□□□□ -0.37
CLPX-203ENST00000558958 H7C1H1 209 aa12.72□□□□□ -0.37
CLPX-203ENST00000558958 HTN3P15516 51 aa12.72□□□□□ -0.37
CLPX-203ENST00000558958 ALKBH7Q9BT30 221 aaPredicted RBP12.72□□□□□ -0.37
CLPX-203ENST00000558958 K7EQD1 137 aa12.71□□□□□ -0.38
CLPX-203ENST00000558958 P0DMU3 169 aa12.71□□□□□ -0.38
CLPX-203ENST00000558958 FAM231AP0DMU4 169 aa12.71□□□□□ -0.38
CLPX-203ENST00000558958 FAM231CP0DMU5 169 aa12.71□□□□□ -0.38
CLPX-203ENST00000558958 NRACQ8N912 160 aa12.71□□□□□ -0.38
CLPX-203ENST00000558958 PRELID3AQ96N28 172 aa12.71□□□□□ -0.38
CLPX-203ENST00000558958 PRO0255Q9UI72 69 aa12.71□□□□□ -0.38
CLPX-203ENST00000558958 CRYBA4P53673 196 aa12.7□□□□□ -0.38
CLPX-203ENST00000558958 RPL39LQ96EH5 51 aaKnown RBP12.7□□□□□ -0.38
CLPX-203ENST00000558958 Q9UF83 564 aa12.7□□□□□ -0.38
CLPX-203ENST00000558958 DNAH7Q8WXX0 4024 aa12.69□□□□□ -0.38
CLPX-203ENST00000558958 SRIP30626 198 aa12.69□□□□□ -0.38
CLPX-203ENST00000558958 NIT2Q9NQR4 276 aa12.69□□□□□ -0.38
CLPX-203ENST00000558958 LAMTOR2Q9Y2Q5 125 aa12.69□□□□□ -0.38
CLPX-203ENST00000558958 TRBV10-1A0A0K0K1A3 114 aa12.68□□□□□ -0.38
CLPX-203ENST00000558958 TNFRSF6BO95407 300 aa12.68□□□□□ -0.38
CLPX-203ENST00000558958 PPP1R17O96001 155 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms