RNA–Protein interactions for RNA: ENST00000554244.5

RAD51B-219, Transcript of RAD51 paralog B, human

TSL 3

Gene RAD51B, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-219	ENST00000554244	HOXD3	P31249	432 aa	Predicted RBP	4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	LINC00315	P59091	139 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	TMEM97	Q5BJF2	176 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	FOXI2	Q6ZQN5	318 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	TMEM86B	Q8N661	226 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	C14orf178	Q8N769	122 aa	Predicted RBP	4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	TOMM6	Q96B49	74 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	RPL39L	Q96EH5	51 aa	Known RBP	4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244		Q96MF0	132 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	HIGD1B	Q9P298	99 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	MYO9A	B2RTY4	2548 aa		4.38	□□□□□ -1.71
RAD51B-219	ENST00000554244	TEX15	Q9BXT5	2789 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	FBN2	P35556	2912 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	IGHV1OR15-1	A0A075B7D0	117 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	TRAV12-3	A0A0B4J271	114 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	IGHV3-16	A0A0C4DH30	117 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	LINC01549	A6NIU2	74 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	CD7	P09564	240 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	PLN	P26678	52 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	CDKN1B	P46527	198 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	NMU	P48645	174 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	SUMO4	Q6EEV6	95 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	AMTN	Q6UX39	209 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	ADAMTSL5	Q6ZMM2	481 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244		Q6ZVH6	145 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	PCP2	Q8IVA1	136 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	TEX29	Q8N6K0	151 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	MRPL35	Q9NZE8	188 aa	Known RBP	4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	HHLA3	Q9XRX5	114 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	EPG5	Q9HCE0	2579 aa		4.37	□□□□□ -1.71
RAD51B-219	ENST00000554244	MAP1A	P78559	2803 aa	Predicted RBP	4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	ZFHX3	Q15911	3703 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	TRGV11	A0A075B6L2	103 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	IGKV2D-26	A0A0A0MRZ7	120 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	TRBV6-5	A0A0K0K1A5	114 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244		A6NDN8	102 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	C9orf118	A6NHY6	69 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244		F8VRH5	84 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	LINC01619	G3V211	115 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244		H7C1H1	209 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	TCTA	P57738	103 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	UBE2V1	Q13404	147 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	TCTEX1D4	Q5JR98	221 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	ZC2HC1B	Q5TFG8	222 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	C2orf66	Q6UXQ4	117 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	C4orf3	Q8WVX3	66 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	SCGB3A1	Q96QR1	104 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	CSTL1	Q9H114	145 aa		4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	SON	P18583	2426 aa	Known RBP	4.36	□□□□□ -1.71
RAD51B-219	ENST00000554244	CENPE	Q02224	2701 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	TRAV12-2	A0A075B6T6	113 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	CBY3	A6NI87	242 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244		H3BRM9	83 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	CCL25	O15444	150 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	PTTG1IP	P53801	180 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	POLR2K	P53803	58 aa	Known RBP	4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	RIPPLY3	P57055	190 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	VAMP3	Q15836	100 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	SPINK13	Q1W4C9	94 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	DEFB136	Q30KP8	78 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	C18orf65	Q6ZTR6	163 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	ERAS	Q7Z444	233 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	GTSCR1	Q86UQ5	136 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	NEXN-AS1	Q8NBZ9	246 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	DUX5	Q96PT3	197 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	CHAC1	Q9BUX1	264 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	JPT2	Q9H910	190 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	TMEM160	Q9NX00	188 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	PEMT	Q9UBM1	199 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	CYSLTR1	Q9Y271	337 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	FLNA	P21333	2647 aa	Known RBP	4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	APC	P25054	2843 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244	MXRA5	Q9NR99	2828 aa		4.35	□□□□□ -1.71
RAD51B-219	ENST00000554244		A0A087WWL8	130 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	TRBV27	A0A0K0K1C4	114 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	VCY	O14598	125 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	IGKV3-20	P01619	116 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	CRYGD	P07320	174 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	RHOH	Q15669	191 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	TAL2	Q16559	108 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	MORN3	Q6PF18	240 aa	Predicted RBP	4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	ZFP2	Q6ZN57	461 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	KLHL30-AS1	Q8NEE0	82 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	BAALC	Q8WXS3	180 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	EDA2R	Q9HAV5	297 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	MDFIC	Q9P1T7	246 aa		4.34	□□□□□ -1.71
RAD51B-219	ENST00000554244	TRBV25-1	A0A075B6N4	114 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	TRAV8-6	A0A0B4J262	113 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	RBMY1B	A6NDE4	496 aa	Known RBP	4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	RBMY1E	A6NEQ0	496 aa	Known RBP	4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	SDHAF1	A6NFY7	115 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	DNAJC9-AS1	A6NH13	148 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	PRSS29P	A6NIE9	313 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	KNCN	A6PVL3	124 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244		F5H697	171 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244		H3BMM0	161 aa		4.33	□□□□□ -1.72
RAD51B-219	ENST00000554244	RBMY1D	P0C7P1	496 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms