RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 APOC1P02654 83 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 FGF7P21781 194 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 KLKP1Q107X0 134 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 LSM10Q969L4 123 aaKnown RBP1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 RERGLQ9H628 205 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 DLEC1Q9Y238 1755 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 MYH6P13533 1939 aa1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 PIPP12273 146 aaPredicted RBP1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 UBE2G1P62253 170 aa1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 ZNF56Q15929 161 aa1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 PLAC4Q8WY50 150 aa1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 CRCT1Q9UGL9 99 aa1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 FOCADQ5VW36 1801 aa1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 KIF13AQ9H1H9 1805 aa1.09□□□□□ -2.23
LSM6P2-201ENST00000552208 WDR7Q9Y4E6 1490 aa1.09□□□□□ -2.24
LSM6P2-201ENST00000552208 ZNF142P52746 1687 aaPredicted RBP1.09□□□□□ -2.24
LSM6P2-201ENST00000552208 RREB1Q92766 1687 aa1.09□□□□□ -2.24
LSM6P2-201ENST00000552208 ABCA4P78363 2273 aa1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 ZNF518AQ6AHZ1 1483 aa1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 TCRBV3S1A0A5B6 114 aa1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 Q6AWC8 147 aa1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 C10orf82Q8WW14 230 aa1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 COPS9Q8WXC6 57 aa1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 ASH1LQ9NR48 2969 aaKnown RBP1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 SERP1Q9Y6X1 66 aa1.08□□□□□ -2.24
LSM6P2-201ENST00000552208 NAIPQ13075 1403 aa1.07□□□□□ -2.24
LSM6P2-201ENST00000552208 LAMB1P07942 1786 aa1.07□□□□□ -2.24
LSM6P2-201ENST00000552208 A0A087WTM6 91 aa1.07□□□□□ -2.24
LSM6P2-201ENST00000552208 FXYD1O00168 92 aa1.07□□□□□ -2.24
LSM6P2-201ENST00000552208 CCL3L1P16619 93 aa1.07□□□□□ -2.24
LSM6P2-201ENST00000552208 CYP2G1PQ6ZSU1 146 aa1.07□□□□□ -2.24
LSM6P2-201ENST00000552208 PP6455Q8WZ26 134 aa1.07□□□□□ -2.24
LSM6P2-201ENST00000552208 SMG6Q86US8 1419 aaKnown RBP1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 SNCGO76070 127 aa1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 CBLN1P23435 193 aa1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 ELOF1P60002 83 aaKnown RBP1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 NAA60Q9H7X0 242 aa1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 RPRMQ9NS64 109 aa1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 TMEM14BQ9NUH8 114 aa1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 NALCNQ8IZF0 1738 aa1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 MUC22E2RYF6 1773 aaPredicted RBP1.06□□□□□ -2.24
LSM6P2-201ENST00000552208 LAMA4Q16363 1823 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 A2ML1A8K2U0 1454 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 A0A096LNT2 108 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 CLPSL1A2RUU4 121 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 MCRIP1C9JLW8 97 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 LY6G6CO95867 125 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 UBE2D1P51668 147 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 Q8N8P6 123 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 SCN3BQ9NY72 215 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 BCORL1Q5H9F3 1711 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 ZDBF2Q9HCK1 2354 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 IFT140Q96RY7 1462 aa1.05□□□□□ -2.24
LSM6P2-201ENST00000552208 AKAIN1P0CW23 69 aa1.04□□□□□ -2.24
LSM6P2-201ENST00000552208 RPL37P61927 97 aaKnown RBP1.04□□□□□ -2.24
LSM6P2-201ENST00000552208 C20orf197Q8N268 126 aa1.04□□□□□ -2.24
LSM6P2-201ENST00000552208 BET1LQ9NYM9 111 aa1.04□□□□□ -2.24
LSM6P2-201ENST00000552208 QRICH2Q9H0J4 1663 aa1.04□□□□□ -2.24
LSM6P2-201ENST00000552208 TENM1Q9UKZ4 2725 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 KIAA0100Q14667 2235 aaKnown RBP1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 IFNA17P01571 189 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 IFNGP01579 166 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 SPINK13Q1W4C9 94 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 Q56UQ5 140 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 S100A7L2Q5SY68 101 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 RPL7L1Q6DKI1 246 aaKnown RBP1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 TMEM203Q969S6 136 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 COA4Q9NYJ1 87 aa1.03□□□□□ -2.24
LSM6P2-201ENST00000552208 TRBV10-3A0A0K0K1G6 114 aa1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 A6NIN4 97 aa1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 SPTBP11277 2137 aa1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 SSBP1Q04837 148 aaKnown RBP1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 C12orf73Q69YU5 71 aa1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 SPTSSBQ8NFR3 76 aa1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 COX7B2Q8TF08 81 aa1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 PPP1R1CQ8WVI7 109 aa1.02□□□□□ -2.25
LSM6P2-201ENST00000552208 CORTO00230 105 aa1.01□□□□□ -2.25
LSM6P2-201ENST00000552208 SPINT3P49223 89 aa1.01□□□□□ -2.25
LSM6P2-201ENST00000552208 CCL8P80075 99 aa1.01□□□□□ -2.25
LSM6P2-201ENST00000552208 INSL4Q14641 139 aa1.01□□□□□ -2.25
LSM6P2-201ENST00000552208 ZNF818PQ6ZRF7 136 aa1.01□□□□□ -2.25
LSM6P2-201ENST00000552208 ATG2AQ2TAZ0 1938 aa1.01□□□□□ -2.25
LSM6P2-201ENST00000552208 EIF4G3O43432 1585 aaKnown RBP1□□□□□ -2.25
LSM6P2-201ENST00000552208 FCGBPQ9Y6R7 5405 aaPredicted RBP1□□□□□ -2.25
LSM6P2-201ENST00000552208 ZNF469Q96JG9 3925 aaPredicted RBP1□□□□□ -2.25
LSM6P2-201ENST00000552208 MIF4GDA9UHW6 222 aaKnown RBP1□□□□□ -2.25
LSM6P2-201ENST00000552208 F6UZH7 168 aa1□□□□□ -2.25
LSM6P2-201ENST00000552208 TNFP01375 233 aa1□□□□□ -2.25
LSM6P2-201ENST00000552208 SPINK9Q5DT21 86 aa1□□□□□ -2.25
LSM6P2-201ENST00000552208 AFDNP55196 1824 aaKnown RBP1□□□□□ -2.25
LSM6P2-201ENST00000552208 ESPL1Q14674 2120 aa1□□□□□ -2.25
LSM6P2-201ENST00000552208 CASKIN1Q8WXD9 1431 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 A0A0D9SG42 100 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 RBAKDNA6NC62 111 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 RBM3P98179 157 aaKnown RBP0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 PRB3Q04118 309 aaPredicted RBP0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 C4orf33Q8N1A6 199 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 DSCR8Q96T75 97 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 CGREF1Q99674 301 aa0.99□□□□□ -2.25
LSM6P2-201ENST00000552208 FAM135AQ9P2D6 1515 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms