RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 DUSP14O95147 198 aaKnown RBP10.33□□□□□ -0.75
MSH2-206ENST00000543555 KRTAP1-1Q07627 177 aa10.33□□□□□ -0.75
MSH2-206ENST00000543555 IGHV3-16A0A0C4DH30 117 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 TAX1BP3O14907 124 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 SIVA1O15304 175 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 SPINK13Q1W4C9 94 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 FOXI2Q6ZQN5 318 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
MSH2-206ENST00000543555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.33□□□□□ -0.76
MSH2-206ENST00000543555 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 JPT2Q9H910 190 aa10.33□□□□□ -0.76
MSH2-206ENST00000543555 MUC4Q99102 2169 aa10.32□□□□□ -0.76
MSH2-206ENST00000543555 A0A087WX48 190 aa10.32□□□□□ -0.76
MSH2-206ENST00000543555 ZNF124Q15973 351 aa10.32□□□□□ -0.76
MSH2-206ENST00000543555 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
MSH2-206ENST00000543555 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
MSH2-206ENST00000543555 LINC01619G3V211 115 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 AMTNQ6UX39 209 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 TMEM160Q9NX00 188 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 Q8N1Y9 231 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 A0A087WWL8 130 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 OR11H1Q8NG94 326 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 C4orf3Q8WVX3 66 aa10.31□□□□□ -0.76
MSH2-206ENST00000543555 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
MSH2-206ENST00000543555 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
MSH2-206ENST00000543555 GTSCR1Q86UQ5 136 aa10.3□□□□□ -0.76
MSH2-206ENST00000543555 TMEM86BQ8N661 226 aa10.3□□□□□ -0.76
MSH2-206ENST00000543555 SEC11AP67812 179 aa10.3□□□□□ -0.76
MSH2-206ENST00000543555 HSD52Q0P140 79 aa10.3□□□□□ -0.76
MSH2-206ENST00000543555 C2orf66Q6UXQ4 117 aa10.3□□□□□ -0.76
MSH2-206ENST00000543555 LY6G6DO95868 133 aa10.29□□□□□ -0.76
MSH2-206ENST00000543555 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
MSH2-206ENST00000543555 PEMTQ9UBM1 199 aa10.29□□□□□ -0.76
MSH2-206ENST00000543555 PLNP26678 52 aa10.29□□□□□ -0.76
MSH2-206ENST00000543555 UBE2V1Q13404 147 aa10.29□□□□□ -0.76
MSH2-206ENST00000543555 KHDC1LQ5JSQ8 128 aa10.29□□□□□ -0.76
MSH2-206ENST00000543555 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
MSH2-206ENST00000543555 F5H697 171 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 F8VRH5 84 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 CCL25O15444 150 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 H7C1H1 209 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
MSH2-206ENST00000543555 DEFB131AP59861 70 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 TEX29Q8N6K0 151 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 NEXN-AS1Q8NBZ9 246 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 CBY3A6NI87 242 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 KNCNA6PVL3 124 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 TTTY13Q9BZ97 58 aa10.28□□□□□ -0.76
MSH2-206ENST00000543555 TRAV2A0A0B4J234 112 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 HLA-DRB4P13762 266 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 FAM74A4Q5TZK3 123 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 ERASQ7Z444 233 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 HLA-DRB4X5D2U9 266 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 Q6ZSV7 163 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 TMEM61Q8N0U2 210 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.77
MSH2-206ENST00000543555 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.77
MSH2-206ENST00000543555 VAMP3Q15836 100 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 DLX4Q92988 240 aaPredicted RBP10.26□□□□□ -0.77
MSH2-206ENST00000543555 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 A8MTW9 85 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 INAFM1C9JVW0 142 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 VCYO14598 125 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 CRYGDP07320 174 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 RBMY1A1P0DJD3 496 aaKnown RBP10.26□□□□□ -0.77
MSH2-206ENST00000543555 RBMY1CP0DJD4 496 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 RBMY1FQ15415 496 aaKnown RBP10.26□□□□□ -0.77
MSH2-206ENST00000543555 HIGD1BQ9P298 99 aa10.26□□□□□ -0.77
MSH2-206ENST00000543555 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 DNAJC9-AS1A6NH13 148 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 CYSLTR1Q9Y271 337 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 AGRNO00468 2067 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 A6NDN8 102 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 H3BMM0 161 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 ATRQ13535 2644 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 ZNF56Q15929 161 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 KIR2DL4Q99706 377 aa10.25□□□□□ -0.77
MSH2-206ENST00000543555 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
MSH2-206ENST00000543555 DYNLRB2Q8TF09 96 aa10.24□□□□□ -0.77
MSH2-206ENST00000543555 M0QY20 66 aa10.24□□□□□ -0.77
MSH2-206ENST00000543555 TP53TG1Q9Y2A0 90 aa10.24□□□□□ -0.77
MSH2-206ENST00000543555 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 TRBV25-1A0A075B6N4 114 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
MSH2-206ENST00000543555 RBMY1BA6NDE4 496 aaKnown RBP10.23□□□□□ -0.77
MSH2-206ENST00000543555 RBMY1EA6NEQ0 496 aaKnown RBP10.23□□□□□ -0.77
MSH2-206ENST00000543555 LINC01549A6NIU2 74 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms