RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 IGLL5B9A064 214 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 COX7A2LO14548 114 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 MYO18BQ8IUG5 2567 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 PCP2Q8IVA1 136 aa8.34□□□□□ -1.07
CLIP1-209ENST00000537178 CCL24O00175 119 aa8.34□□□□□ -1.08
CLIP1-209ENST00000537178 ATP5G1P05496 136 aa8.34□□□□□ -1.08
CLIP1-209ENST00000537178 IGHV4-4A0A075B6R2 117 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 A0A0B4J2C4 111 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 PSMB8P28062 276 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 ICOSQ9Y6W8 199 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 CHD3Q12873 2000 aaKnown RBP8.33□□□□□ -1.08
CLIP1-209ENST00000537178 SPART-AS1P0CW21 52 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 DIAPH2-AS1Q14236 149 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 PIFOQ8TCI5 191 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
CLIP1-209ENST00000537178 MRPL36Q9P0J6 103 aaKnown RBP8.33□□□□□ -1.08
CLIP1-209ENST00000537178 IGHV4-28A0A0C4DH34 117 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 IGFBPL1Q8WX77 278 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 C17orf77Q96MU5 243 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 PCDH15Q96QU1 1955 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 GYPEP15421 78 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 DAZ2Q13117 558 aaKnown RBP8.32□□□□□ -1.08
CLIP1-209ENST00000537178 DAZ4Q86SG3 579 aaKnown RBP8.32□□□□□ -1.08
CLIP1-209ENST00000537178 DAZ3Q9NR90 486 aaKnown RBP8.32□□□□□ -1.08
CLIP1-209ENST00000537178 PRUNE2Q8WUY3 3088 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 K7EN84 100 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 C16orf74Q96GX8 76 aa8.32□□□□□ -1.08
CLIP1-209ENST00000537178 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 JMJD7-PLA2G4BH0Y9G9 81 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 DEFB112Q30KQ8 113 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 IGLV2-23P01705 113 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 A4D1N5 150 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 Q71RC1 249 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-209ENST00000537178 TEN1Q86WV5 123 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
CLIP1-209ENST00000537178 K7EQD1 137 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 PROK2Q9HC23 129 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 IGHV4-59P01825 116 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
CLIP1-209ENST00000537178 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
CLIP1-209ENST00000537178 SORL1Q92673 2214 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 NDUFA1O15239 70 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 PRB1P04280 392 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 GATA1P15976 413 aaPredicted RBP8.3□□□□□ -1.08
CLIP1-209ENST00000537178 C4orf48Q5BLP8 95 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 SPG11Q96JI7 2443 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 CENPVL3A0A0U1RRI6 287 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 BAALCQ8WXS3 180 aa8.3□□□□□ -1.08
CLIP1-209ENST00000537178 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 IGKV3D-7A0A0C4DH55 119 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 KIR2DL5BA0A0G2JN68 375 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 KIR2DL5BA0A0G2JPC4 375 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 KIR2DL5AQ8N109 375 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 FAM215AQ9Y5M1 114 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 ZNF503-AS2A6NEH8 195 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 RSPO1Q2MKA7 263 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-209ENST00000537178 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 GP9P14770 177 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 ASPHD1Q5U4P2 390 aa8.29□□□□□ -1.08
CLIP1-209ENST00000537178 CXCL5P42830 114 aa8.28□□□□□ -1.08
CLIP1-209ENST00000537178 UBE2AP49459 152 aa8.28□□□□□ -1.08
CLIP1-209ENST00000537178 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
CLIP1-209ENST00000537178 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-209ENST00000537178 FRYLO94915 3013 aa8.28□□□□□ -1.08
CLIP1-209ENST00000537178 FAM236AA0A1B0GUQ0 79 aa8.28□□□□□ -1.08
CLIP1-209ENST00000537178 FAM236BA0A1B0GV22 79 aa8.28□□□□□ -1.08
CLIP1-209ENST00000537178 TM2D2Q9BX73 214 aa8.28□□□□□ -1.08
CLIP1-209ENST00000537178 BDP1A6H8Y1 2624 aa8.28□□□□□ -1.08
CLIP1-209ENST00000537178 J3KT08 172 aa8.27□□□□□ -1.08
CLIP1-209ENST00000537178 PROP1O75360 226 aa8.27□□□□□ -1.08
CLIP1-209ENST00000537178 TDRG1Q3Y452 100 aa8.27□□□□□ -1.08
CLIP1-209ENST00000537178 Q8NFD4 153 aa8.27□□□□□ -1.08
CLIP1-209ENST00000537178 HIGD2BQ4VC39 106 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 APRG1Q8IVJ8 170 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 PRB2P02812 416 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-209ENST00000537178 ANKRD39Q53RE8 183 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 IGHV3-30P01768 117 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 IGHV3-33P01772 117 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 IGHV3-30-3P0DP02 117 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 IGHV3-30-5P0DP03 117 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 DEFB136Q30KP8 78 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 MED13Q9UHV7 2174 aa8.27□□□□□ -1.09
CLIP1-209ENST00000537178 IGLV3-1P01715 115 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 SEC61GP60059 68 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 PDE6GP18545 87 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 AJUBAQ96IF1 538 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 HIGD1BQ9P298 99 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 CTSZQ9UBR2 303 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 FRYQ5TBA9 3013 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 H3BT86 120 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 IGKV1-17P01599 117 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 EML6Q6ZMW3 1958 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 LECT2O14960 151 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 SPRY2O43597 315 aa8.26□□□□□ -1.09
CLIP1-209ENST00000537178 C9orf47Q6ZRZ4 202 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms