RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 DEFB108AA8MXU0 73 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 NTN3O00634 580 aaPredicted RBP3.45□□□□□ -1.86
PCM1-215ENST00000522275 PROP1O75360 226 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 DNAL4O96015 105 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 SPINK2P20155 84 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 IGLV3-21P80748 117 aaPredicted RBP3.45□□□□□ -1.86
PCM1-215ENST00000522275 TNP2Q05952 138 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 PAPPA-AS1Q5QFB9 102 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 IMMP1LQ96LU5 166 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 CXXC4Q9H2H0 198 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 TMEM14BQ9NUH8 114 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 SPRR3Q9UBC9 169 aa3.45□□□□□ -1.86
PCM1-215ENST00000522275 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 TRBV27A0A0K0K1C4 114 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 C12orf77C9JDV5 145 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 IGLV3-19P01714 112 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 GRPP07492 148 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 ESRGQ1W209 222 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.44□□□□□ -1.86
PCM1-215ENST00000522275 C10orf128Q5T292 105 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 WFDC9Q8NEX5 89 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 SPATA3Q8NHX4 192 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 IGHV3-43A0A0B4J1X8 118 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 TMEM256-PLSCR3K7ERE1 68 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 NDUFC1O43677 76 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 LHBP01229 141 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 TRBV12-3P01733 135 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 PATE4P0C8F1 98 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 IGHV3-43DP0DP04 118 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 BLCAPP62952 87 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 ECSCRQ19T08 205 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 FLVCR1-AS1Q8TAF5 88 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 LINC00588Q9Y4M8 146 aa3.44□□□□□ -1.86
PCM1-215ENST00000522275 IGHV1OR21-1A0A087WYE8 117 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 IGHV3-48P01763 117 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 EGR2P11161 476 aaPredicted RBP3.43□□□□□ -1.86
PCM1-215ENST00000522275 SERTAD4-AS1Q5TG53 156 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 FAM27BQ5VT28 67 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 C2orf66Q6UXQ4 117 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 IGKV1D-37A0A075B6S9 117 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 A0A087WWL8 130 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 IGIPA6NJ69 53 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 ZNF73O43830 326 aaPredicted RBP3.43□□□□□ -1.86
PCM1-215ENST00000522275 ZNF575Q86XF7 245 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 Q8IYB0 196 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 CNFNQ9BYD5 112 aa3.43□□□□□ -1.86
PCM1-215ENST00000522275 KIAA0100Q14667 2235 aaKnown RBP3.42□□□□□ -1.86
PCM1-215ENST00000522275 MUC22E2RYF6 1773 aaPredicted RBP3.42□□□□□ -1.86
PCM1-215ENST00000522275 A0A1W2PP55 124 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 ZNF32P17041 273 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 CD40P25942 277 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 NDPQ00604 133 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 PRCDQ00LT1 54 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 ZNF826PQ6ZT77 177 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 DEFB127Q9H1M4 99 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 C14orf132Q9NPU4 83 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 LAMA3Q16787 3333 aa3.42□□□□□ -1.86
PCM1-215ENST00000522275 A0A0J9YXY3 114 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 SDHAF1A6NFY7 115 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 A8MU10 97 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 COX7A2LO14548 114 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 LEPROTO15243 131 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 NDUFS5O43920 106 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 MIFP14174 115 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 ZNF80P51504 273 aaPredicted RBP3.41□□□□□ -1.86
PCM1-215ENST00000522275 RPL39P5Q59GN2 51 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 ENHOQ6UWT2 76 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 SMIM2Q9BVW6 85 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 COL4A6Q14031 1691 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 SEC16AO15027 2179 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 BRCA2P51587 3418 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 EPOPA6NHQ4 379 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 C10orf142B7Z368 130 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 BCE1O60756 84 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 TSHBP01222 138 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 TRGV3P03979 118 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 CD52P31358 61 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 RNASE4P34096 147 aaKnown RBP3.41□□□□□ -1.86
PCM1-215ENST00000522275 SUB1P53999 127 aaKnown RBP eCLIP3.41□□□□□ -1.86
PCM1-215ENST00000522275 Q1T7F1 81 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 DEFB110Q30KQ9 67 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 LCE2CQ5TA81 110 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 Q6ZVQ6 151 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 TMEM61Q8N0U2 210 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 LITAFQ99732 161 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
PCM1-215ENST00000522275 IGHV3-64A0A075B6Q5 118 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 IGHV5-51A0A0C4DH38 117 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 A0A0J9YX75 114 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 A8MUN3 132 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 E7EQL1 145 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 J3QT63 122 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 PSPHP1O15172 72 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 PSPNO60542 156 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 IGKV3-11P04433 115 aa3.4□□□□□ -1.86
PCM1-215ENST00000522275 C9orf129Q5T035 196 aaKnown RBP3.4□□□□□ -1.86
PCM1-215ENST00000522275 Q6ZRP5 223 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms