RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 JPT2Q9H910 190 aa12.61□□□□□ -0.39
TSPAN17-209ENST00000515708 IGSF10Q6WRI0 2623 aa12.6□□□□□ -0.39
TSPAN17-209ENST00000515708 H3BUX3 64 aa12.6□□□□□ -0.39
TSPAN17-209ENST00000515708 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
TSPAN17-209ENST00000515708 FAM159AQ6UWV7 190 aa12.6□□□□□ -0.39
TSPAN17-209ENST00000515708 ZFP2Q6ZN57 461 aa12.6□□□□□ -0.39
TSPAN17-209ENST00000515708 KLHL30-AS1Q8NEE0 82 aa12.6□□□□□ -0.39
TSPAN17-209ENST00000515708 MRPL16Q9NX20 251 aaKnown RBP12.6□□□□□ -0.39
TSPAN17-209ENST00000515708 BLCAPP62952 87 aa12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 Q6ZS46 218 aa12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 DEFB104AQ8WTQ1 72 aa12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 IGHV4-61A0A0C4DH41 118 aa12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 A6NDX4 124 aa12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 UBE2D1P51668 147 aa12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 SRSF9Q13242 221 aaKnown RBP eCLIP12.59□□□□□ -0.39
TSPAN17-209ENST00000515708 LINC01549A6NIU2 74 aa12.58□□□□□ -0.4
TSPAN17-209ENST00000515708 EDN2P20800 178 aa12.58□□□□□ -0.4
TSPAN17-209ENST00000515708 EMP1P54849 157 aa12.58□□□□□ -0.4
TSPAN17-209ENST00000515708 A0A087WWL8 130 aa12.58□□□□□ -0.4
TSPAN17-209ENST00000515708 RPL39P62891 51 aaKnown RBP12.58□□□□□ -0.4
TSPAN17-209ENST00000515708 PMVKQ15126 192 aa12.58□□□□□ -0.4
TSPAN17-209ENST00000515708 PAPPA-AS1Q5QFB9 102 aa12.58□□□□□ -0.4
TSPAN17-209ENST00000515708 IGLV1-40P01703 118 aa12.57□□□□□ -0.4
TSPAN17-209ENST00000515708 KIR2DL4Q99706 377 aa12.57□□□□□ -0.4
TSPAN17-209ENST00000515708 ZFYVE26Q68DK2 2539 aa12.57□□□□□ -0.4
TSPAN17-209ENST00000515708 VCYO14598 125 aa12.57□□□□□ -0.4
TSPAN17-209ENST00000515708 FLNCQ14315 2725 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 CD7P09564 240 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 HERVK_113P61574 105 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 DCANP1Q8TF63 244 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 A0A0J9YY99 117 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 F5H697 171 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 TMEM141Q96I45 108 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 TIMM17AQ99595 171 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 PIMREGQ9BSJ6 248 aa12.56□□□□□ -0.4
TSPAN17-209ENST00000515708 ID1P41134 155 aa12.55□□□□□ -0.4
TSPAN17-209ENST00000515708 INSL3P51460 131 aa12.55□□□□□ -0.4
TSPAN17-209ENST00000515708 DLX4Q92988 240 aaPredicted RBP12.55□□□□□ -0.4
TSPAN17-209ENST00000515708 TRBV27A0A0K0K1C4 114 aa12.54□□□□□ -0.4
TSPAN17-209ENST00000515708 GNLYP22749 145 aa12.54□□□□□ -0.4
TSPAN17-209ENST00000515708 CFAP126Q5VTH2 177 aa12.54□□□□□ -0.4
TSPAN17-209ENST00000515708 ZNF418Q8TF45 676 aaPredicted RBP12.54□□□□□ -0.4
TSPAN17-209ENST00000515708 K7EMT4 169 aa12.54□□□□□ -0.4
TSPAN17-209ENST00000515708 LGALS9O00182 355 aa12.54□□□□□ -0.4
TSPAN17-209ENST00000515708 TSPEAR-AS2P59090 65 aa12.54□□□□□ -0.4
TSPAN17-209ENST00000515708 CFHR3Q02985 330 aa12.53□□□□□ -0.4
TSPAN17-209ENST00000515708 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
TSPAN17-209ENST00000515708 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.4
TSPAN17-209ENST00000515708 APOMO95445 188 aa12.52□□□□□ -0.4
TSPAN17-209ENST00000515708 SMCPP49901 116 aaPredicted RBP12.52□□□□□ -0.4
TSPAN17-209ENST00000515708 ZNF876PQ49A33 203 aa12.52□□□□□ -0.4
TSPAN17-209ENST00000515708 TMEM170BQ5T4T1 132 aa12.52□□□□□ -0.4
TSPAN17-209ENST00000515708 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.4
TSPAN17-209ENST00000515708 SFTA2Q6UW10 78 aa12.52□□□□□ -0.4
TSPAN17-209ENST00000515708 LOC107984156A0A0G2JMH3 177 aa12.52□□□□□ -0.41
TSPAN17-209ENST00000515708 UBE2D3P61077 147 aa12.52□□□□□ -0.41
TSPAN17-209ENST00000515708 UBE2D2P62837 147 aa12.52□□□□□ -0.41
TSPAN17-209ENST00000515708 NDUFA11Q86Y39 141 aa12.52□□□□□ -0.41
TSPAN17-209ENST00000515708 ARL17AQ8IVW1 177 aa12.52□□□□□ -0.41
TSPAN17-209ENST00000515708 C10orf105Q8TEF2 133 aa12.52□□□□□ -0.41
TSPAN17-209ENST00000515708 MAP1AP78559 2803 aaPredicted RBP12.51□□□□□ -0.41
TSPAN17-209ENST00000515708 SHISA2Q6UWI4 295 aa12.51□□□□□ -0.41
TSPAN17-209ENST00000515708 C9orf85Q96MD7 179 aa12.51□□□□□ -0.41
TSPAN17-209ENST00000515708 IGHV3-16A0A0C4DH30 117 aa12.51□□□□□ -0.41
TSPAN17-209ENST00000515708 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
TSPAN17-209ENST00000515708 PSMB2P49721 201 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 SLC25A29Q8N8R3 303 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 MDFICQ9P1T7 246 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 SS18L2Q9UHA2 77 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 USP9XQ93008 2570 aaPredicted RBP12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 IGHV3-30P01768 117 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 IGHV3-30-5P0DP03 117 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 AMELXQ99217 191 aa12.5□□□□□ -0.41
TSPAN17-209ENST00000515708 CSMD2Q7Z408 3487 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 CRYBG3Q68DQ2 2970 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 TRAV12-2A0A075B6T6 113 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 M0QY20 66 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 FOXI1Q12951 378 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■□□□ 13.8
TSPAN17-209ENST00000515708 ZNF56Q15929 161 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 ODF3Q96PU9 254 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
TSPAN17-209ENST00000515708 J3QQQ9 107 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 CFC1BP0CG36 223 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 CFC1P0CG37 223 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 Q8N1Y9 231 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 CCL19Q99731 98 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 MYO18BQ8IUG5 2567 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 IGHV4-30-2A0A087WSY4 118 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 MSMBP08118 114 aa12.48□□□□□ -0.41
TSPAN17-209ENST00000515708 NSUN5P1Q3KNT7 163 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms