RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 TMEM254Q8TBM7 123 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 LAMA2P24043 3122 aaKnown RBP3.66□□□□□ -1.82
NEAT1-202ENST00000501122 FAM19A1Q7Z5A9 133 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 FGF23Q9GZV9 251 aaPredicted RBP3.66□□□□□ -1.82
NEAT1-202ENST00000501122 C1orf147Q96MC9 270 aaPredicted RBP3.66□□□□□ -1.82
NEAT1-202ENST00000501122 C16orf97H3BN30 126 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 CCL4P13236 92 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 EIF4EBP1Q13541 118 aaPredicted RBP3.66□□□□□ -1.82
NEAT1-202ENST00000501122 LINC00308Q8TCZ7 52 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 FAM30AQ9NZY2 134 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 ANKRD17O75179 2603 aaKnown RBP3.66□□□□□ -1.82
NEAT1-202ENST00000501122 QRICH2Q9H0J4 1663 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 DEFB103AP81534 67 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 A0A087WVE0 104 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 PSPNO60542 156 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 NOTCH4Q99466 2003 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 TRBV6-1A0A0K0K1D8 114 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 C1orf158Q8N1D5 194 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 MROH2AA6NES4 1674 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 ANKRD36A6QL64 1941 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV1-69P01742 117 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 NALCNQ8IZF0 1738 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 CAMTA1Q9Y6Y1 1673 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 ZNF80P51504 273 aaPredicted RBP3.65□□□□□ -1.82
NEAT1-202ENST00000501122 C9orf139Q6ZV77 190 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 VWCEQ96DN2 955 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 SPTY2D1-AS1A0A0U1RR47 76 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 BRI3O95415 125 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 SMCPP49901 116 aaPredicted RBP3.65□□□□□ -1.82
NEAT1-202ENST00000501122 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 GNRH2O43555 120 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 IGKV1-16P04430 117 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 AFDNP55196 1824 aaKnown RBP3.65□□□□□ -1.82
NEAT1-202ENST00000501122 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.82
NEAT1-202ENST00000501122 PCOLCEQ15113 449 aa3.65□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV1-2P23083 117 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 IGHV4-30-2A0A087WSY4 118 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 C2orf48Q96LS8 159 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 WNK3Q9BYP7 1800 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 IQGAP1P46940 1657 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 TRBV10-1A0A0K0K1A3 114 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 ITLN2Q8WWU7 325 aaPredicted RBP3.65□□□□□ -1.83
NEAT1-202ENST00000501122 IGHV3-16A0A0C4DH30 117 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 CCDC140Q96MF4 163 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 ZNF71Q9NQZ8 489 aaPredicted RBP3.65□□□□□ -1.83
NEAT1-202ENST00000501122 A0A0G2JNJ9 132 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 RPL39P62891 51 aaKnown RBP3.65□□□□□ -1.83
NEAT1-202ENST00000501122 Q9UFV3 132 aa3.65□□□□□ -1.83
NEAT1-202ENST00000501122 TMEM92Q6UXU6 159 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 C17orf82Q86X59 251 aaPredicted RBP3.64□□□□□ -1.83
NEAT1-202ENST00000501122 IGHV3-11P01762 117 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 SPHKAPQ2M3C7 1700 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 C2orf16Q68DN1 1984 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 Q9UF83 564 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 IGHV4-59P01825 116 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 C17orf77Q96MU5 243 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 ZCCHC11Q5TAX3 1644 aaKnown RBP3.64□□□□□ -1.83
NEAT1-202ENST00000501122 LAMB4A4D0S4 1761 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 LINC00474Q9P2X8 69 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 LINC00322Q6ZN03 302 aaPredicted RBP3.64□□□□□ -1.83
NEAT1-202ENST00000501122 IGLV2-8P01709 118 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 TFF2Q03403 129 aa3.64□□□□□ -1.83
NEAT1-202ENST00000501122 KMT2EQ8IZD2 1858 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
NEAT1-202ENST00000501122 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
NEAT1-202ENST00000501122 DIP2BQ9P265 1576 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 HOXB4P17483 251 aaPredicted RBP3.63□□□□□ -1.83
NEAT1-202ENST00000501122 PRR15Q8IV56 129 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 PROK2Q9HC23 129 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 DIRC1Q969H9 104 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 HIGD2AQ9BW72 106 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 CFAP54Q96N23 3096 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 ATP1A1-AS1Q5TC04 95 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 SBSPONQ8IVN8 264 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 EFNA2O43921 213 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 Q6ZVQ6 151 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 Q8N9L7 120 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 BSPH1Q075Z2 132 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 Q8N3U1 123 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 TICRRQ7Z2Z1 1910 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 CLTCQ00610 1675 aaKnown RBP3.63□□□□□ -1.83
NEAT1-202ENST00000501122 IGLV3-21P80748 117 aaPredicted RBP3.63□□□□□ -1.83
NEAT1-202ENST00000501122 MDS2Q8NDY4 140 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 H3BRN7 92 aa3.63□□□□□ -1.83
NEAT1-202ENST00000501122 CYP4F30PQ9H0H9 118 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 NDUFA4O00483 81 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 DOCK2Q92608 1830 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 GREB1LQ9C091 1923 aaPredicted RBP3.62□□□□□ -1.83
NEAT1-202ENST00000501122 Q0VFX4 171 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 EML5Q05BV3 1969 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 HILS1P60008 231 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 C22orf34Q6ZV56 151 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 RPL28P46779 137 aaKnown RBP3.62□□□□□ -1.83
NEAT1-202ENST00000501122 B9D2Q9BPU9 175 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 XRN1Q8IZH2 1706 aaKnown RBP3.62□□□□□ -1.83
NEAT1-202ENST00000501122 AKAP12Q02952 1782 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 WFDC10BQ8IUB3 73 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 LENEPQ9Y5L5 61 aa3.62□□□□□ -1.83
NEAT1-202ENST00000501122 WT1-ASQ06250 92 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms