RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 WDR73Q6P4I2 378 aa14.11□□□□□ -0.15
CTSD-206ENST00000497544 BORCS7Q96B45 105 aa14.11□□□□□ -0.15
CTSD-206ENST00000497544 JPT2Q9H910 190 aa14.11□□□□□ -0.15
CTSD-206ENST00000497544 HIGD1CA8MV81 97 aa14.1□□□□□ -0.15
CTSD-206ENST00000497544 IGLL5B9A064 214 aa14.1□□□□□ -0.15
CTSD-206ENST00000497544 CTRLP40313 264 aa14.1□□□□□ -0.15
CTSD-206ENST00000497544 NXPH4O95158 308 aa14.09□□□□□ -0.15
CTSD-206ENST00000497544 HOXA5P20719 270 aa14.09□□□□□ -0.15
CTSD-206ENST00000497544 NTF3P20783 257 aa14.09□□□□□ -0.15
CTSD-206ENST00000497544 SLAQ13239 276 aa14.09□□□□□ -0.15
CTSD-206ENST00000497544 FHL2Q14192 279 aa14.09□□□□□ -0.15
CTSD-206ENST00000497544 NAT8BQ9UHF3 227 aa14.09□□□□□ -0.15
CTSD-206ENST00000497544 IGHV4-4A0A075B6R2 117 aa14.08□□□□□ -0.16
CTSD-206ENST00000497544 IGHV3-73A0A0B4J1V6 119 aa14.08□□□□□ -0.16
CTSD-206ENST00000497544 APOC3P02656 99 aa14.08□□□□□ -0.16
CTSD-206ENST00000497544 TWIST1Q15672 202 aa14.08□□□□□ -0.16
CTSD-206ENST00000497544 DNAH10Q8IVF4 4471 aa14.07□□□□□ -0.16
CTSD-206ENST00000497544 SMIM27A0A1W2PRY6 76 aa14.07□□□□□ -0.16
CTSD-206ENST00000497544 FAM210BQ96KR6 192 aa14.07□□□□□ -0.16
CTSD-206ENST00000497544 SAMD10Q9BYL1 202 aa14.07□□□□□ -0.16
CTSD-206ENST00000497544 MSRB1Q9NZV6 116 aa14.07□□□□□ -0.16
CTSD-206ENST00000497544 PRO0255Q9UI72 69 aa14.07□□□□□ -0.16
CTSD-206ENST00000497544 HHLA3Q9XRX5 114 aa14.07□□□□□ -0.16
CTSD-206ENST00000497544 ABCA13Q86UQ4 5058 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 A0A087WWL8 130 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 RHODO00212 210 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 TRGC1P0CF51 173 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 SMIM17P0DL12 118 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 FAM74A4Q5TZK3 123 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 ZFP2Q6ZN57 461 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 NUP35Q8NFH5 326 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 AP1S3Q96PC3 154 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 CNFNQ9BYD5 112 aa14.06□□□□□ -0.16
CTSD-206ENST00000497544 TRAV26-1A0A087WT03 109 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 A0A0J9YY99 117 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 A0A1B0GUT8 65 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 PAX4O43316 350 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 CRYGDP07320 174 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 TMEM88Q6PEY1 159 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 CLRN3Q8NCR9 226 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 CTDSP1Q9GZU7 261 aa14.05□□□□□ -0.16
CTSD-206ENST00000497544 C7orf77A4D0Y5 90 aa14.04□□□□□ -0.16
CTSD-206ENST00000497544 RIGQ13278 110 aa14.04□□□□□ -0.16
CTSD-206ENST00000497544 SMIM15Q7Z3B0 74 aa14.04□□□□□ -0.16
CTSD-206ENST00000497544 SVBPQ8N300 66 aa14.04□□□□□ -0.16
CTSD-206ENST00000497544 C14orf178Q8N769 122 aaPredicted RBP14.04□□□□□ -0.16
CTSD-206ENST00000497544 SNAPINO95295 136 aa14.03□□□□□ -0.16
CTSD-206ENST00000497544 CRYBA4P53673 196 aa14.03□□□□□ -0.16
CTSD-206ENST00000497544 TCTAP57738 103 aa14.03□□□□□ -0.16
CTSD-206ENST00000497544 F5H697 171 aa14.02□□□□□ -0.17
CTSD-206ENST00000497544 GATA1P15976 413 aaPredicted RBP14.02□□□□□ -0.17
CTSD-206ENST00000497544 EVI2AP22794 236 aa14.02□□□□□ -0.17
CTSD-206ENST00000497544 RHEBQ15382 184 aa14.02□□□□□ -0.17
CTSD-206ENST00000497544 UFSP1Q6NVU6 142 aa14.02□□□□□ -0.17
CTSD-206ENST00000497544 RPS10P5Q9NQ39 176 aa14.02□□□□□ -0.17
CTSD-206ENST00000497544 KMT2AQ03164 3969 aa14.01□□□□□ -0.17
CTSD-206ENST00000497544 FAM3BP58499 235 aaPredicted RBP14.01□□□□□ -0.17
CTSD-206ENST00000497544 C15orf53Q8NAA6 179 aa14.01□□□□□ -0.17
CTSD-206ENST00000497544 VSIG2Q96IQ7 327 aa14.01□□□□□ -0.17
CTSD-206ENST00000497544 PRADC1Q9BSG0 188 aa14.01□□□□□ -0.17
CTSD-206ENST00000497544 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
CTSD-206ENST00000497544 TRBV6-4A0A1B0GX49 114 aa14□□□□□ -0.17
CTSD-206ENST00000497544 H3BNG1 76 aa14□□□□□ -0.17
CTSD-206ENST00000497544 NUDT3O95989 172 aa14□□□□□ -0.17
CTSD-206ENST00000497544 MGPP08493 103 aa14□□□□□ -0.17
CTSD-206ENST00000497544 ZNF56Q15929 161 aa14□□□□□ -0.17
CTSD-206ENST00000497544 Q6ZSN1 163 aa14□□□□□ -0.17
CTSD-206ENST00000497544 KIF25-AS1Q9Y6Z4 181 aa14□□□□□ -0.17
CTSD-206ENST00000497544 A0A087WWC5 75 aa13.99□□□□□ -0.17
CTSD-206ENST00000497544 RAB4BP61018 213 aa13.99□□□□□ -0.17
CTSD-206ENST00000497544 SLC25A29Q8N8R3 303 aa13.99□□□□□ -0.17
CTSD-206ENST00000497544 IMMP2LQ96T52 175 aa13.99□□□□□ -0.17
CTSD-206ENST00000497544 TMEM242Q9NWH2 141 aa13.99□□□□□ -0.17
CTSD-206ENST00000497544 APLNQ9ULZ1 77 aa13.99□□□□□ -0.17
CTSD-206ENST00000497544 RHOHQ15669 191 aa13.98□□□□□ -0.17
CTSD-206ENST00000497544 KCNIP4Q6PIL6 250 aa13.98□□□□□ -0.17
CTSD-206ENST00000497544 A0A1B0GW15 77 aa13.97□□□□□ -0.17
CTSD-206ENST00000497544 GYPEP15421 78 aa13.97□□□□□ -0.17
CTSD-206ENST00000497544 S100PP25815 95 aa13.97□□□□□ -0.17
CTSD-206ENST00000497544 MRPL54Q6P161 138 aaKnown RBP13.97□□□□□ -0.17
CTSD-206ENST00000497544 ICOSQ9Y6W8 199 aa13.97□□□□□ -0.17
CTSD-206ENST00000497544 K7EQD1 137 aa13.96□□□□□ -0.17
CTSD-206ENST00000497544 S100A8P05109 93 aa13.96□□□□□ -0.17
CTSD-206ENST00000497544 CAMPP49913 170 aa13.96□□□□□ -0.17
CTSD-206ENST00000497544 LINC00315P59091 139 aa13.96□□□□□ -0.17
CTSD-206ENST00000497544 MRPL23Q16540 153 aaKnown RBP13.96□□□□□ -0.17
CTSD-206ENST00000497544 BTF3L4Q96K17 158 aa13.96□□□□□ -0.17
CTSD-206ENST00000497544 ATP5L2Q7Z4Y8 100 aa13.95□□□□□ -0.18
CTSD-206ENST00000497544 TMEM191AQ9H0A3 160 aa13.95□□□□□ -0.18
CTSD-206ENST00000497544 LOC100131303A0A0U1RQF7 123 aa13.94□□□□□ -0.18
CTSD-206ENST00000497544 HBBP68871 147 aa13.94□□□□□ -0.18
CTSD-206ENST00000497544 A0A096LPF7 62 aa13.93□□□□□ -0.18
CTSD-206ENST00000497544 SRIP30626 198 aa13.93□□□□□ -0.18
CTSD-206ENST00000497544 URGCP-MRPS24S4R325 110 aa13.93□□□□□ -0.18
CTSD-206ENST00000497544 TRAV9-1A0A075B6T8 112 aa13.92□□□□□ -0.18
CTSD-206ENST00000497544 TRBV10-1A0A0K0K1A3 114 aa13.92□□□□□ -0.18
CTSD-206ENST00000497544 H7C1H1 209 aa13.92□□□□□ -0.18
CTSD-206ENST00000497544 LINC00476Q8WZB0 136 aa13.92□□□□□ -0.18
CTSD-206ENST00000497544 A0A1B0GXF2 115 aa13.91□□□□□ -0.18
CTSD-206ENST00000497544 P0DMU3 169 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms