RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
CHTOP-206ENST00000495554 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
CHTOP-206ENST00000495554 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
CHTOP-206ENST00000495554 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.64
CHTOP-206ENST00000495554 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
CHTOP-206ENST00000495554 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
CHTOP-206ENST00000495554 GAGE10A6NGK3 116 aa11.08□□□□□ -0.64
CHTOP-206ENST00000495554 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.08□□□□□ -0.64
CHTOP-206ENST00000495554 HOXA3O43365 443 aaPredicted RBP11.08□□□□□ -0.64
CHTOP-206ENST00000495554 ELANEP08246 267 aa11.08□□□□□ -0.64
CHTOP-206ENST00000495554 OR9G4Q8NGQ1 327 aa11.08□□□□□ -0.64
CHTOP-206ENST00000495554 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
CHTOP-206ENST00000495554 ZNF702PQ9H963 129 aa11.08□□□□□ -0.64
CHTOP-206ENST00000495554 SPRY2O43597 315 aa11.07□□□□□ -0.64
CHTOP-206ENST00000495554 SUMO2P61956 95 aaKnown RBP11.07□□□□□ -0.64
CHTOP-206ENST00000495554 HIST2H2BCQ6DN03 193 aa11.07□□□□□ -0.64
CHTOP-206ENST00000495554 SMIM9A6NGZ8 99 aa11.07□□□□□ -0.64
CHTOP-206ENST00000495554 LGALS1P09382 135 aaKnown RBP11.07□□□□□ -0.64
CHTOP-206ENST00000495554 SNRPD3P62318 126 aaKnown RBP11.07□□□□□ -0.64
CHTOP-206ENST00000495554 FAM159AQ6UWV7 190 aa11.07□□□□□ -0.64
CHTOP-206ENST00000495554 RASL10AQ92737 203 aa11.07□□□□□ -0.64
CHTOP-206ENST00000495554 FOXC2Q99958 501 aa11.07□□□□□ -0.64
CHTOP-206ENST00000495554 HHLA3Q9XRX5 114 aa11.07□□□□□ -0.64
CHTOP-206ENST00000495554 NXPH4O95158 308 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 IGKCP01834 107 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 TLN2Q9Y4G6 2542 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 K7EMI3 77 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 LGALS9O00182 355 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 NMUP48645 174 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
CHTOP-206ENST00000495554 ITPR3Q14573 2671 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 DPM2O94777 84 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 PPP1R17O96001 155 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 TCTAP57738 103 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 UBE2E2Q96LR5 201 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 ZNF688P0C7X2 276 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 SYNJ2BPP57105 145 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 SEC11AP67812 179 aa11.05□□□□□ -0.64
CHTOP-206ENST00000495554 K7EQG2 157 aa11.04□□□□□ -0.64
CHTOP-206ENST00000495554 MGPP08493 103 aa11.04□□□□□ -0.64
CHTOP-206ENST00000495554 PCP2Q8IVA1 136 aa11.04□□□□□ -0.64
CHTOP-206ENST00000495554 POM121L12Q8N7R1 296 aa11.04□□□□□ -0.64
CHTOP-206ENST00000495554 RNF152Q8N8N0 203 aa11.04□□□□□ -0.64
CHTOP-206ENST00000495554 KMT2BQ9UMN6 2715 aaPredicted RBP11.03□□□□□ -0.64
CHTOP-206ENST00000495554 IGHV4OR15-8A0A075B7B6 117 aa11.03□□□□□ -0.64
CHTOP-206ENST00000495554 A0A087WW49 117 aa11.03□□□□□ -0.64
CHTOP-206ENST00000495554 A0A0J9YX75 114 aa11.03□□□□□ -0.64
CHTOP-206ENST00000495554 C7orf71A4D174 169 aa11.03□□□□□ -0.64
CHTOP-206ENST00000495554 WFDC11Q8NEX6 87 aa11.03□□□□□ -0.64
CHTOP-206ENST00000495554 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
CHTOP-206ENST00000495554 TRAV12-3A0A0B4J271 114 aa11.03□□□□□ -0.64
CHTOP-206ENST00000495554 HOXD3P31249 432 aaPredicted RBP11.03□□□□□ -0.64
CHTOP-206ENST00000495554 TEX48A0A1B0GUV7 120 aa11.02□□□□□ -0.65
CHTOP-206ENST00000495554 CD7P09564 240 aa11.02□□□□□ -0.65
CHTOP-206ENST00000495554 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
CHTOP-206ENST00000495554 CCDC168Q8NDH2 2452 aa11.02□□□□□ -0.65
CHTOP-206ENST00000495554 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
CHTOP-206ENST00000495554 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
CHTOP-206ENST00000495554 KIF25-AS1Q9Y6Z4 181 aa11.02□□□□□ -0.65
CHTOP-206ENST00000495554 MRPL23Q16540 153 aaKnown RBP11.01□□□□□ -0.65
CHTOP-206ENST00000495554 ZC2HC1BQ5TFG8 222 aa11.01□□□□□ -0.65
CHTOP-206ENST00000495554 ADAMTSL5Q6ZMM2 481 aa11.01□□□□□ -0.65
CHTOP-206ENST00000495554 FOXI2Q6ZQN5 318 aa11.01□□□□□ -0.65
CHTOP-206ENST00000495554 ANAPC13Q9BS18 74 aa11.01□□□□□ -0.65
CHTOP-206ENST00000495554 PDZD2O15018 2839 aa11.01□□□□□ -0.65
CHTOP-206ENST00000495554 LINC00315P59091 139 aa11.01□□□□□ -0.65
CHTOP-206ENST00000495554 IGKV2D-26A0A0A0MRZ7 120 aa11□□□□□ -0.65
CHTOP-206ENST00000495554 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
CHTOP-206ENST00000495554 PLNP26678 52 aa11□□□□□ -0.65
CHTOP-206ENST00000495554 Q8N2B8 174 aa11□□□□□ -0.65
CHTOP-206ENST00000495554 SCGB3A1Q96QR1 104 aa11□□□□□ -0.65
CHTOP-206ENST00000495554 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
CHTOP-206ENST00000495554 NAA38Q9BRA0 125 aaKnown RBP11□□□□□ -0.65
CHTOP-206ENST00000495554 A6NDN8 102 aa10.99□□□□□ -0.65
CHTOP-206ENST00000495554 DUSP14O95147 198 aaKnown RBP10.99□□□□□ -0.65
CHTOP-206ENST00000495554 PLA2G2AP14555 144 aa10.99□□□□□ -0.65
CHTOP-206ENST00000495554 GTSCR1Q86UQ5 136 aa10.99□□□□□ -0.65
CHTOP-206ENST00000495554 MYO9AB2RTY4 2548 aa10.99□□□□□ -0.65
CHTOP-206ENST00000495554 IGKV3-20P01619 116 aa10.99□□□□□ -0.65
CHTOP-206ENST00000495554 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
CHTOP-206ENST00000495554 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
CHTOP-206ENST00000495554 HELZ2Q9BYK8 2649 aaKnown RBP10.99□□□□□ -0.65
CHTOP-206ENST00000495554 TRAV12-2A0A075B6T6 113 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 H7C1H1 209 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 SEC61GP60059 68 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 RPL24P83731 157 aaKnown RBP10.98□□□□□ -0.65
CHTOP-206ENST00000495554 HIGD1BQ9P298 99 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 MUC4Q99102 2169 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 F8VRH5 84 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 K7EP34 96 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 C2orf66Q6UXQ4 117 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 C18orf65Q6ZTR6 163 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 C9orf85Q96MD7 179 aa10.98□□□□□ -0.65
CHTOP-206ENST00000495554 FLNAP21333 2647 aaKnown RBP10.97□□□□□ -0.65
CHTOP-206ENST00000495554 F5H768 121 aa10.97□□□□□ -0.65
CHTOP-206ENST00000495554 JPT2Q9H910 190 aa10.97□□□□□ -0.65
CHTOP-206ENST00000495554 J3QR89 54 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms