RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 COX6B1P14854 86 aa15.91■□□□□ 0.14
LINC01140-202ENST00000467438 ETDBQ3ZM63 59 aa15.91■□□□□ 0.14
LINC01140-202ENST00000467438 SCGB1D4Q6XE38 83 aa15.91■□□□□ 0.14
LINC01140-202ENST00000467438 CFHR3Q02985 330 aa15.91■□□□□ 0.14
LINC01140-202ENST00000467438 POM121L12Q8N7R1 296 aa15.91■□□□□ 0.14
LINC01140-202ENST00000467438 SORL1Q92673 2214 aa15.9■□□□□ 0.14
LINC01140-202ENST00000467438 IGIPA6NJ69 53 aa15.9■□□□□ 0.14
LINC01140-202ENST00000467438 POLR2KP53803 58 aaKnown RBP15.9■□□□□ 0.14
LINC01140-202ENST00000467438 OPRPNQ99935 248 aaPredicted RBP15.9■□□□□ 0.14
LINC01140-202ENST00000467438 SPANXB1Q9NS25 103 aaPredicted RBP15.9■□□□□ 0.14
LINC01140-202ENST00000467438 MSMBP08118 114 aa15.9■□□□□ 0.14
LINC01140-202ENST00000467438 ZNF256Q9Y2P7 627 aaPredicted RBP15.9■□□□□ 0.14
LINC01140-202ENST00000467438 PGPEP1Q9NXJ5 209 aa15.89■□□□□ 0.13
LINC01140-202ENST00000467438 CUBNO60494 3623 aa15.89■□□□□ 0.13
LINC01140-202ENST00000467438 SDHAF1A6NFY7 115 aa15.89■□□□□ 0.13
LINC01140-202ENST00000467438 TSPEAR-AS2P59090 65 aa15.89■□□□□ 0.13
LINC01140-202ENST00000467438 DOPEY2Q9Y3R5 2298 aa15.88■□□□□ 0.13
LINC01140-202ENST00000467438 A0A1B0GWB2 263 aa15.88■□□□□ 0.13
LINC01140-202ENST00000467438 HOXA3O43365 443 aaPredicted RBP15.88■□□□□ 0.13
LINC01140-202ENST00000467438 IGHV4-59P01825 116 aa15.88■□□□□ 0.13
LINC01140-202ENST00000467438 INSL3P51460 131 aa15.88■□□□□ 0.13
LINC01140-202ENST00000467438 DUX5Q96PT3 197 aa15.88■□□□□ 0.13
LINC01140-202ENST00000467438 IGHV4OR15-8A0A075B7B6 117 aa15.87■□□□□ 0.13
LINC01140-202ENST00000467438 A0A087WW49 117 aa15.87■□□□□ 0.13
LINC01140-202ENST00000467438 BRI3O95415 125 aa15.87■□□□□ 0.13
LINC01140-202ENST00000467438 PRORYQ9H606 182 aa15.87■□□□□ 0.13
LINC01140-202ENST00000467438 SRSF9Q13242 221 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC01140-202ENST00000467438 ZNRF2Q8NHG8 242 aa15.87■□□□□ 0.13
LINC01140-202ENST00000467438 LINC01549A6NIU2 74 aa15.86■□□□□ 0.13
LINC01140-202ENST00000467438 F8W1H4 67 aa15.86■□□□□ 0.13
LINC01140-202ENST00000467438 PRO0461Q9UI25 63 aa15.86■□□□□ 0.13
LINC01140-202ENST00000467438 PKD1L2Q7Z442 2459 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 SPINK13Q1W4C9 94 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 Q8N1Y9 231 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 MRPL16Q9NX20 251 aaKnown RBP15.85■□□□□ 0.13
LINC01140-202ENST00000467438 TRBV7-9A0A0J9YWB2 115 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 LINC01619G3V211 115 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 PPP1R17O96001 155 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 ID1P41134 155 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 TMEM170BQ5T4T1 132 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 MAPK1IP1LQ8NDC0 245 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 GTSF1LQ9H1H1 148 aa15.85■□□□□ 0.13
LINC01140-202ENST00000467438 TSSC4Q9Y5U2 329 aaPredicted RBP15.85■□□□□ 0.13
LINC01140-202ENST00000467438 IGHV3-16A0A0C4DH30 117 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 TMEM238C9JI98 176 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 APOMO95445 188 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 PSMB8P28062 276 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 PMVKQ15126 192 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 GAGE13Q4V321 117 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 KIR2DL4Q99706 377 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 VCYO14598 125 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 ZNF56Q15929 161 aa15.84■□□□□ 0.13
LINC01140-202ENST00000467438 SPAG8Q99932 426 aaPredicted RBP15.84■□□□□ 0.13
LINC01140-202ENST00000467438 DEFB112Q30KQ8 113 aa15.83■□□□□ 0.12
LINC01140-202ENST00000467438 USP9XQ93008 2570 aaPredicted RBP15.83■□□□□ 0.12
LINC01140-202ENST00000467438 K7EMT4 169 aa15.82■□□□□ 0.12
LINC01140-202ENST00000467438 A0A0J9YY99 117 aa15.82■□□□□ 0.12
LINC01140-202ENST00000467438 NDUFS8O00217 210 aa15.82■□□□□ 0.12
LINC01140-202ENST00000467438 TSPAN13O95857 204 aa15.81■□□□□ 0.12
LINC01140-202ENST00000467438 SYNJ2BPP57105 145 aa15.81■□□□□ 0.12
LINC01140-202ENST00000467438 C9orf85Q96MD7 179 aa15.81■□□□□ 0.12
LINC01140-202ENST00000467438 A0A0J9YX75 114 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 PRM2P04554 102 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 IGHV3-64A0A075B6Q5 118 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 LOC107984156A0A0G2JMH3 177 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 M0QY20 66 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 LGALS9O00182 355 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 UBE2D1P51668 147 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 ARL17AQ8IVW1 177 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 FBN2P35556 2912 aa15.8■□□□□ 0.12
LINC01140-202ENST00000467438 TRBV27A0A0K0K1C4 114 aa15.79■□□□□ 0.12
LINC01140-202ENST00000467438 MXRA5Q9NR99 2828 aa15.79■□□□□ 0.12
LINC01140-202ENST00000467438 POLQO75417 2590 aa15.79■□□□□ 0.12
LINC01140-202ENST00000467438 HTN1P15515 57 aa15.79■□□□□ 0.12
LINC01140-202ENST00000467438 P0DMU3 169 aa15.78■□□□□ 0.12
LINC01140-202ENST00000467438 FAM231AP0DMU4 169 aa15.78■□□□□ 0.12
LINC01140-202ENST00000467438 FAM231CP0DMU5 169 aa15.78■□□□□ 0.12
LINC01140-202ENST00000467438 AZU1P20160 251 aa15.78■□□□□ 0.12
LINC01140-202ENST00000467438 SMCPP49901 116 aaPredicted RBP15.78■□□□□ 0.12
LINC01140-202ENST00000467438 RPL32P62910 135 aaKnown RBP15.78■□□□□ 0.12
LINC01140-202ENST00000467438 PSMB2P49721 201 aa15.78■□□□□ 0.12
LINC01140-202ENST00000467438 SMAGPQ0VAQ4 97 aa15.78■□□□□ 0.12
LINC01140-202ENST00000467438 ZNF876PQ49A33 203 aa15.78■□□□□ 0.12
LINC01140-202ENST00000467438 USP9YO00507 2555 aaPredicted RBP15.78■□□□□ 0.12
LINC01140-202ENST00000467438 IGHV3-73A0A0B4J1V6 119 aa15.77■□□□□ 0.12
LINC01140-202ENST00000467438 TGFAP01135 160 aa15.77■□□□□ 0.12
LINC01140-202ENST00000467438 GAGE12HA6NDE8 117 aa15.77■□□□□ 0.11
LINC01140-202ENST00000467438 TMEM141Q96I45 108 aa15.77■□□□□ 0.11
LINC01140-202ENST00000467438 TIMM17AQ99595 171 aa15.77■□□□□ 0.11
LINC01140-202ENST00000467438 ZNF580Q9UK33 172 aa15.77■□□□□ 0.11
LINC01140-202ENST00000467438 B4DSR2 109 aa15.76■□□□□ 0.11
LINC01140-202ENST00000467438 K7EQG2 157 aa15.76■□□□□ 0.11
LINC01140-202ENST00000467438 AMELXQ99217 191 aa15.76■□□□□ 0.11
LINC01140-202ENST00000467438 CENPEQ02224 2701 aa15.76■□□□□ 0.11
LINC01140-202ENST00000467438 RBMY1A1P0DJD3 496 aaKnown RBP15.76■□□□□ 0.11
LINC01140-202ENST00000467438 RBMY1CP0DJD4 496 aa15.76■□□□□ 0.11
LINC01140-202ENST00000467438 HERVK_113P61574 105 aa15.76■□□□□ 0.11
LINC01140-202ENST00000467438 RBMY1FQ15415 496 aaKnown RBP15.76■□□□□ 0.11
LINC01140-202ENST00000467438 IGHV1OR15-1A0A075B7D0 117 aa15.75■□□□□ 0.11
LINC01140-202ENST00000467438 PROK1P58294 105 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms