RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MUC21A0A140T8X8 626 aa11.21□□□□□ -0.61
GPC1-207ENST00000466624 CRYGDP07320 174 aa11.21□□□□□ -0.61
GPC1-207ENST00000466624 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.61
GPC1-207ENST00000466624 NTF3P20783 257 aa11.21□□□□□ -0.61
GPC1-207ENST00000466624 BORCS7Q96B45 105 aa11.21□□□□□ -0.61
GPC1-207ENST00000466624 PGLYRP4Q96LB8 373 aa11.21□□□□□ -0.61
GPC1-207ENST00000466624 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
GPC1-207ENST00000466624 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
GPC1-207ENST00000466624 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
GPC1-207ENST00000466624 TRGC1P0CF51 173 aa11.2□□□□□ -0.62
GPC1-207ENST00000466624 CRYBA4P53673 196 aa11.2□□□□□ -0.62
GPC1-207ENST00000466624 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
GPC1-207ENST00000466624 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
GPC1-207ENST00000466624 A0A1B0GUT8 65 aa11.19□□□□□ -0.62
GPC1-207ENST00000466624 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
GPC1-207ENST00000466624 VSIG2Q96IQ7 327 aa11.19□□□□□ -0.62
GPC1-207ENST00000466624 CTDSP1Q9GZU7 261 aa11.19□□□□□ -0.62
GPC1-207ENST00000466624 MSRB1Q9NZV6 116 aa11.19□□□□□ -0.62
GPC1-207ENST00000466624 KIF25-AS1Q9Y6Z4 181 aa11.19□□□□□ -0.62
GPC1-207ENST00000466624 A0A087WWL8 130 aa11.18□□□□□ -0.62
GPC1-207ENST00000466624 PAX4O43316 350 aa11.18□□□□□ -0.62
GPC1-207ENST00000466624 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
GPC1-207ENST00000466624 SSTP61278 116 aa11.18□□□□□ -0.62
GPC1-207ENST00000466624 TWIST1Q15672 202 aa11.18□□□□□ -0.62
GPC1-207ENST00000466624 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
GPC1-207ENST00000466624 TENM2Q9NT68 2774 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 A0A0J9YY99 117 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 RHEBQ15382 184 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 RHOHQ15669 191 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 SLC7A5P1Q8MH63 180 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 C14orf178Q8N769 122 aaPredicted RBP11.17□□□□□ -0.62
GPC1-207ENST00000466624 SLC25A29Q8N8R3 303 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 TMEM242Q9NWH2 141 aa11.17□□□□□ -0.62
GPC1-207ENST00000466624 A0A087WWC5 75 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 A0A1B0GW15 77 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 APOC3P02656 99 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 LINC00315P59091 139 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 RAB4BP61018 213 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 RIGQ13278 110 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 SVBPQ8N300 66 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 IMMP2LQ96T52 175 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 DPH3P1Q9H4G8 78 aa11.16□□□□□ -0.62
GPC1-207ENST00000466624 K7EQD1 137 aa11.15□□□□□ -0.62
GPC1-207ENST00000466624 EVI2AP22794 236 aa11.15□□□□□ -0.62
GPC1-207ENST00000466624 SMIM15Q7Z3B0 74 aa11.15□□□□□ -0.62
GPC1-207ENST00000466624 ICOSQ9Y6W8 199 aa11.15□□□□□ -0.62
GPC1-207ENST00000466624 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
GPC1-207ENST00000466624 SNAPINO95295 136 aa11.14□□□□□ -0.63
GPC1-207ENST00000466624 ZNF56Q15929 161 aa11.14□□□□□ -0.63
GPC1-207ENST00000466624 MRPL23Q16540 153 aaKnown RBP11.14□□□□□ -0.63
GPC1-207ENST00000466624 Q6ZSN1 163 aa11.14□□□□□ -0.63
GPC1-207ENST00000466624 A0A096LPF7 62 aa11.13□□□□□ -0.63
GPC1-207ENST00000466624 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
GPC1-207ENST00000466624 NUDT3O95989 172 aa11.13□□□□□ -0.63
GPC1-207ENST00000466624 ATP5L2Q7Z4Y8 100 aa11.13□□□□□ -0.63
GPC1-207ENST00000466624 TMEM191AQ9H0A3 160 aa11.13□□□□□ -0.63
GPC1-207ENST00000466624 S100A8P05109 93 aa11.12□□□□□ -0.63
GPC1-207ENST00000466624 GYPEP15421 78 aa11.12□□□□□ -0.63
GPC1-207ENST00000466624 SH2D6Q7Z4S9 175 aa11.12□□□□□ -0.63
GPC1-207ENST00000466624 FRZBQ92765 325 aa11.12□□□□□ -0.63
GPC1-207ENST00000466624 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 TRAV9-1A0A075B6T8 112 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 F5H697 171 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 H7C1H1 209 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 MGPP08493 103 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 SRIP30626 198 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 FAM3BP58499 235 aaPredicted RBP11.11□□□□□ -0.63
GPC1-207ENST00000466624 KCNIP4Q6PIL6 250 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 RPS10P5Q9NQ39 176 aa11.11□□□□□ -0.63
GPC1-207ENST00000466624 P0DMU3 169 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 FAM231AP0DMU4 169 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 FAM231CP0DMU5 169 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 LINC00694P0DN24 101 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 HBBP68871 147 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 LGALS9CQ6DKI2 356 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 GATD1Q8NB37 220 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 BTF3L4Q96K17 158 aa11.1□□□□□ -0.63
GPC1-207ENST00000466624 DNAH1Q9P2D7 4330 aa11.09□□□□□ -0.63
GPC1-207ENST00000466624 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
GPC1-207ENST00000466624 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
GPC1-207ENST00000466624 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
GPC1-207ENST00000466624 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
GPC1-207ENST00000466624 VPS13DQ5THJ4 4388 aa11.08□□□□□ -0.64
GPC1-207ENST00000466624 M0QY20 66 aa11.08□□□□□ -0.64
GPC1-207ENST00000466624 S100PP25815 95 aa11.08□□□□□ -0.64
GPC1-207ENST00000466624 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
GPC1-207ENST00000466624 LINC00476Q8WZB0 136 aa11.08□□□□□ -0.64
GPC1-207ENST00000466624 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
GPC1-207ENST00000466624 CAMPP49913 170 aa11.07□□□□□ -0.64
GPC1-207ENST00000466624 CCL18P55774 89 aa11.07□□□□□ -0.64
GPC1-207ENST00000466624 TIRAPP58753 221 aa11.07□□□□□ -0.64
GPC1-207ENST00000466624 RASL11AQ6T310 242 aa11.07□□□□□ -0.64
GPC1-207ENST00000466624 NEXN-AS1Q8NBZ9 246 aa11.07□□□□□ -0.64
GPC1-207ENST00000466624 DNAJC30Q96LL9 226 aa11.07□□□□□ -0.64
GPC1-207ENST00000466624 LYSTQ99698 3801 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms