RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 CFAP126Q5VTH2 177 aa6.93□□□□□ -1.3
C9orf78-203ENST00000461539 Q6ZTC4 211 aa6.93□□□□□ -1.3
C9orf78-203ENST00000461539 ATP5L2Q7Z4Y8 100 aa6.93□□□□□ -1.3
C9orf78-203ENST00000461539 POM121L12Q8N7R1 296 aa6.93□□□□□ -1.3
C9orf78-203ENST00000461539 ZNF479Q96JC4 524 aa6.93□□□□□ -1.3
C9orf78-203ENST00000461539 C18orf15Q96N68 181 aa6.93□□□□□ -1.3
C9orf78-203ENST00000461539 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
C9orf78-203ENST00000461539 TGIF2-C20orf24A0A0A6YYL0 155 aa6.92□□□□□ -1.3
C9orf78-203ENST00000461539 TRGV4A0A0C4DH28 118 aa6.92□□□□□ -1.3
C9orf78-203ENST00000461539 A0A1B0GXF2 115 aa6.92□□□□□ -1.3
C9orf78-203ENST00000461539 RHODO00212 210 aa6.92□□□□□ -1.3
C9orf78-203ENST00000461539 CRYGDP07320 174 aa6.92□□□□□ -1.3
C9orf78-203ENST00000461539 MGPP08493 103 aa6.92□□□□□ -1.3
C9orf78-203ENST00000461539 RAB4BP61018 213 aa6.92□□□□□ -1.3
C9orf78-203ENST00000461539 F5H697 171 aa6.91□□□□□ -1.3
C9orf78-203ENST00000461539 F5H768 121 aa6.91□□□□□ -1.3
C9orf78-203ENST00000461539 ELOBQ15370 118 aa6.91□□□□□ -1.3
C9orf78-203ENST00000461539 ZNF56Q15929 161 aa6.91□□□□□ -1.3
C9orf78-203ENST00000461539 ZFP2Q6ZN57 461 aa6.91□□□□□ -1.3
C9orf78-203ENST00000461539 DPH3P1Q9H4G8 78 aa6.91□□□□□ -1.3
C9orf78-203ENST00000461539 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
C9orf78-203ENST00000461539 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.3
C9orf78-203ENST00000461539 DNAH9Q9NYC9 4486 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 DEFB131BA0A096LNP1 70 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 CIDEAO60543 219 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 FHL2Q14192 279 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 AMN1Q8IY45 258 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 FAM210BQ96KR6 192 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 TMEM191AQ9H0A3 160 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 KIF25-AS1Q9Y6Z4 181 aa6.9□□□□□ -1.3
C9orf78-203ENST00000461539 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 HOXA5P20719 270 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 LINC00315P59091 139 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 RASL11AQ6T310 242 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 YPEL4Q96NS1 127 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 NBEAL2Q6ZNJ1 2754 aa6.89□□□□□ -1.31
C9orf78-203ENST00000461539 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
C9orf78-203ENST00000461539 A0A0J9YY99 117 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 GATA1P15976 413 aaPredicted RBP6.88□□□□□ -1.31
C9orf78-203ENST00000461539 RAB4AP20338 218 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 SLAQ13239 276 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 COX19Q49B96 90 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 FAM104BQ5XKR9 115 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 SUMO4Q6EEV6 95 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 TMEM136Q6ZRR5 245 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 Q6ZSN1 163 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 PHLDA1Q8WV24 401 aaPredicted RBP6.88□□□□□ -1.31
C9orf78-203ENST00000461539 RNF185Q96GF1 192 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 PRO0255Q9UI72 69 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 HHLA3Q9XRX5 114 aa6.88□□□□□ -1.31
C9orf78-203ENST00000461539 TRAV26-2A0A0B4J265 109 aa6.87□□□□□ -1.31
C9orf78-203ENST00000461539 PAX4O43316 350 aa6.87□□□□□ -1.31
C9orf78-203ENST00000461539 HLA-DQA1P01909 254 aa6.87□□□□□ -1.31
C9orf78-203ENST00000461539 FRZBQ92765 325 aa6.87□□□□□ -1.31
C9orf78-203ENST00000461539 PRADC1Q9BSG0 188 aa6.87□□□□□ -1.31
C9orf78-203ENST00000461539 GNB1LQ9BYB4 327 aa6.87□□□□□ -1.31
C9orf78-203ENST00000461539 TRAV26-1A0A087WT03 109 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 H7C1H1 209 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 K7EQD1 137 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 APCSP02743 223 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 MT-ND6P03923 174 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 P0DMU3 169 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 FAM231AP0DMU4 169 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 FAM231CP0DMU5 169 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 CRYBA4P53673 196 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 RHOHQ15669 191 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 MRPL51Q4U2R6 128 aaKnown RBP6.86□□□□□ -1.31
C9orf78-203ENST00000461539 SLC25A29Q8N8R3 303 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 MRAP2Q96G30 205 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 WWC2-AS2Q96NR7 200 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 TRAPPC1Q9Y5R8 145 aa6.86□□□□□ -1.31
C9orf78-203ENST00000461539 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 GAGE12JA6NER3 117 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 COLCA2A8K830 154 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 IGLL5B9A064 214 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 SMKR1H3BMG3 65 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 M0QY20 66 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 NCR2O95944 276 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 CKS2P33552 79 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 RPS10P46783 165 aaKnown RBP6.85□□□□□ -1.31
C9orf78-203ENST00000461539 FABP9Q0Z7S8 132 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 GAGE1Q13065 139 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 GAGE4Q13068 117 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 GAGE5Q13069 117 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 GAGE13Q4V321 117 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 ZFAND6Q6FIF0 208 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
C9orf78-203ENST00000461539 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.85□□□□□ -1.31
C9orf78-203ENST00000461539 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
C9orf78-203ENST00000461539 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
C9orf78-203ENST00000461539 NUPR2A6NF83 97 aa6.84□□□□□ -1.31
C9orf78-203ENST00000461539 D6R8Y8 96 aa6.84□□□□□ -1.31
C9orf78-203ENST00000461539 GAS8-AS1O95177 125 aa6.84□□□□□ -1.31
C9orf78-203ENST00000461539 GYPEP15421 78 aa6.84□□□□□ -1.31
C9orf78-203ENST00000461539 RAB5AP20339 215 aa6.84□□□□□ -1.31
C9orf78-203ENST00000461539 RPL36AP83881 106 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms