RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 IGHV3-73A0A0B4J1V6 119 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 SNAPINO95295 136 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 SMIM17P0DL12 118 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 FHL2Q14192 279 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 FAM210BQ96KR6 192 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 SAMD10Q9BYL1 202 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 MSRB1Q9NZV6 116 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 DNAH7Q8WXX0 4024 aa14.51□□□□□ -0.09
C4orf48-202ENST00000409860 C7orf77A4D0Y5 90 aa14.5□□□□□ -0.09
C4orf48-202ENST00000409860 RIGQ13278 110 aa14.5□□□□□ -0.09
C4orf48-202ENST00000409860 IGLL5B9A064 214 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 CRYGDP07320 174 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 UFSP1Q6NVU6 142 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 TMEM88Q6PEY1 159 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 SMIM15Q7Z3B0 74 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 C14orf178Q8N769 122 aaPredicted RBP14.49□□□□□ -0.09
C4orf48-202ENST00000409860 RPS10P5Q9NQ39 176 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 PRO0255Q9UI72 69 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 HHLA3Q9XRX5 114 aa14.49□□□□□ -0.09
C4orf48-202ENST00000409860 TRAV26-1A0A087WT03 109 aa14.48□□□□□ -0.09
C4orf48-202ENST00000409860 A0A087WWC5 75 aa14.48□□□□□ -0.09
C4orf48-202ENST00000409860 GATA1P15976 413 aaPredicted RBP14.48□□□□□ -0.09
C4orf48-202ENST00000409860 IMMP2LQ96T52 175 aa14.48□□□□□ -0.09
C4orf48-202ENST00000409860 A0A0J9YY99 117 aa14.47□□□□□ -0.09
C4orf48-202ENST00000409860 PAX4O43316 350 aa14.47□□□□□ -0.09
C4orf48-202ENST00000409860 CASC10Q5T4H9 136 aa14.47□□□□□ -0.09
C4orf48-202ENST00000409860 TMEM242Q9NWH2 141 aa14.47□□□□□ -0.09
C4orf48-202ENST00000409860 EVI2AP22794 236 aa14.46□□□□□ -0.09
C4orf48-202ENST00000409860 CRYBA4P53673 196 aa14.46□□□□□ -0.09
C4orf48-202ENST00000409860 ZNF56Q15929 161 aa14.46□□□□□ -0.09
C4orf48-202ENST00000409860 KCNIP4Q6PIL6 250 aa14.46□□□□□ -0.09
C4orf48-202ENST00000409860 DPH3P1Q9H4G8 78 aa14.46□□□□□ -0.09
C4orf48-202ENST00000409860 A0A1B0GW15 77 aa14.45□□□□□ -0.1
C4orf48-202ENST00000409860 MGPP08493 103 aa14.45□□□□□ -0.1
C4orf48-202ENST00000409860 TCTAP57738 103 aa14.45□□□□□ -0.1
C4orf48-202ENST00000409860 FAM3BP58499 235 aaPredicted RBP14.45□□□□□ -0.1
C4orf48-202ENST00000409860 C15orf53Q8NAA6 179 aa14.45□□□□□ -0.1
C4orf48-202ENST00000409860 KIF25-AS1Q9Y6Z4 181 aa14.45□□□□□ -0.1
C4orf48-202ENST00000409860 TRBV6-4A0A1B0GX49 114 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 F5H697 171 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 H3BNG1 76 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 S100PP25815 95 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 RAB4BP61018 213 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 RHOHQ15669 191 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 MRPL54Q6P161 138 aaKnown RBP14.44□□□□□ -0.1
C4orf48-202ENST00000409860 VSIG2Q96IQ7 327 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 PRADC1Q9BSG0 188 aa14.44□□□□□ -0.1
C4orf48-202ENST00000409860 K7EQD1 137 aa14.43□□□□□ -0.1
C4orf48-202ENST00000409860 S100A8P05109 93 aa14.43□□□□□ -0.1
C4orf48-202ENST00000409860 ATP5L2Q7Z4Y8 100 aa14.43□□□□□ -0.1
C4orf48-202ENST00000409860 SLC25A29Q8N8R3 303 aa14.43□□□□□ -0.1
C4orf48-202ENST00000409860 HBBP68871 147 aa14.42□□□□□ -0.1
C4orf48-202ENST00000409860 Q6ZSN1 163 aa14.42□□□□□ -0.1
C4orf48-202ENST00000409860 BTF3L4Q96K17 158 aa14.42□□□□□ -0.1
C4orf48-202ENST00000409860 NUDT3O95989 172 aa14.41□□□□□ -0.1
C4orf48-202ENST00000409860 CAMPP49913 170 aa14.41□□□□□ -0.1
C4orf48-202ENST00000409860 LINC00315P59091 139 aa14.41□□□□□ -0.1
C4orf48-202ENST00000409860 TMEM191AQ9H0A3 160 aa14.41□□□□□ -0.1
C4orf48-202ENST00000409860 ICOSQ9Y6W8 199 aa14.41□□□□□ -0.1
C4orf48-202ENST00000409860 NACAE9PAV3 2078 aa14.4□□□□□ -0.1
C4orf48-202ENST00000409860 TRAV9-1A0A075B6T8 112 aa14.4□□□□□ -0.1
C4orf48-202ENST00000409860 A0A1B0GXF2 115 aa14.4□□□□□ -0.1
C4orf48-202ENST00000409860 GYPEP15421 78 aa14.4□□□□□ -0.1
C4orf48-202ENST00000409860 APLNQ9ULZ1 77 aa14.4□□□□□ -0.1
C4orf48-202ENST00000409860 URGCP-MRPS24S4R325 110 aa14.39□□□□□ -0.11
C4orf48-202ENST00000409860 TRBV10-1A0A0K0K1A3 114 aa14.38□□□□□ -0.11
C4orf48-202ENST00000409860 H7C1H1 209 aa14.38□□□□□ -0.11
C4orf48-202ENST00000409860 MRPL23Q16540 153 aaKnown RBP14.38□□□□□ -0.11
C4orf48-202ENST00000409860 SUMO4Q6EEV6 95 aa14.38□□□□□ -0.11
C4orf48-202ENST00000409860 STARD9Q9P2P6 4700 aa14.37□□□□□ -0.11
C4orf48-202ENST00000409860 DYNC2H1Q8NCM8 4307 aaKnown RBP14.37□□□□□ -0.11
C4orf48-202ENST00000409860 LOC100131303A0A0U1RQF7 123 aa14.37□□□□□ -0.11
C4orf48-202ENST00000409860 SRIP30626 198 aa14.37□□□□□ -0.11
C4orf48-202ENST00000409860 ATRAIDQ6UW56 229 aa14.37□□□□□ -0.11
C4orf48-202ENST00000409860 A0A096LPF7 62 aa14.36□□□□□ -0.11
C4orf48-202ENST00000409860 GAGE12JA6NER3 117 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 GAGE1Q13065 139 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 GAGE4Q13068 117 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 GAGE5Q13069 117 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 GAGE13Q4V321 117 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 RASL11AQ6T310 242 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 SH2D6Q7Z4S9 175 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 AMN1Q8IY45 258 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 GATD1Q8NB37 220 aa14.35□□□□□ -0.11
C4orf48-202ENST00000409860 M0QY20 66 aa14.34□□□□□ -0.11
C4orf48-202ENST00000409860 P0DMU3 169 aa14.34□□□□□ -0.11
C4orf48-202ENST00000409860 FAM231AP0DMU4 169 aa14.34□□□□□ -0.11
C4orf48-202ENST00000409860 FAM231CP0DMU5 169 aa14.34□□□□□ -0.11
C4orf48-202ENST00000409860 RPL36AP83881 106 aaKnown RBP14.34□□□□□ -0.11
C4orf48-202ENST00000409860 FRZBQ92765 325 aa14.34□□□□□ -0.11
C4orf48-202ENST00000409860 RPL36ALQ969Q0 106 aaKnown RBP14.34□□□□□ -0.11
C4orf48-202ENST00000409860 RAB4AP20338 218 aa14.33□□□□□ -0.12
C4orf48-202ENST00000409860 FAM104BQ5XKR9 115 aa14.33□□□□□ -0.12
C4orf48-202ENST00000409860 NEGR1Q7Z3B1 354 aa14.33□□□□□ -0.12
C4orf48-202ENST00000409860 MRAP2Q96G30 205 aa14.33□□□□□ -0.12
C4orf48-202ENST00000409860 RNF185Q96GF1 192 aa14.33□□□□□ -0.12
C4orf48-202ENST00000409860 TRAV26-2A0A0B4J265 109 aa14.32□□□□□ -0.12
C4orf48-202ENST00000409860 NEXN-AS1Q8NBZ9 246 aa14.32□□□□□ -0.12
C4orf48-202ENST00000409860 SMCO4Q9NRQ5 59 aa14.32□□□□□ -0.12
C4orf48-202ENST00000409860 CSMD3Q7Z407 3707 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms